Debian Med Thermometer

Summary

A Debian Pure Blend is a Debian internal project which assembles a set of packages that might help users to solve certain tasks of their work. The list on the right shows the tasks of debian-med.

Links

Color legend

Up to date

Debian stable behind unstable

Ubuntu behind Debian unstable

Waiting in NEW

Not packaged

Obsolete

Upstream behind unstable

Unstable fits upstream

Unstable behind upstream

Debian Med Package Thermometer
Package	stable	testing	unstable	experimental	UNRELEASED	upstream	tasks
abacas (PTS, VCS, UP)	1.3.1-9	1.3.1-9	1.3.1-9			1.3.1	bio covid-19
abpoa (PTS, VCS, UP)	1.5.3-1	1.5.3-1	1.5.3-1			1.5.5	bio bio-dev
abyss (PTS, VCS, UP)	2.3.10-1	2.3.10-1	2.3.10-1			2.3.10	bio cloud covid-19
acacia (VCS, UP)					1.53-0biolinux3		bio
acedb (PTS, VCS, UP)			4.9.39+dfsg.02-9				bio cloud
adapterremoval (PTS, VCS, UP)	2.3.4-1	2.3.4-1	2.3.4-1			2.3.4	bio
adun.app (PTS, VCS, UP)	0.81-15	0.81-15	0.81-15			0.No-Site	bio
aegean (PTS, VCS, UP)	0.16.0+dfsg-4	0.16.0+dfsg-5	0.16.0+dfsg-5			0.16.0	bio
aevol (PTS, VCS, UP)	5.0+ds-4	5.0+ds-4	5.0+ds-4			9.3.0	bio cloud
agat (VCS, UP)					0.5.0-1		bio
aghermann (PTS, VCS, UP)	1.1.2-5	1.1.2-5	1.1.2-5			1.1.2	rehabilitation
alien-hunter (PTS, VCS, UP)	1.7-10	1.7-10	1.7-10			0.No-Release	bio cloud
allelecount (PTS, VCS, UP)	4.3.0-3	4.3.0-3	4.3.0-3			4.3.0	covid-19
alter-sequence-alignment (PTS, VCS, UP)	1.3.4-8	1.3.4-8	1.3.4-8			1.3.4	bio
altree (PTS, VCS, UP)	1.3.2-2	1.3.2-4	1.3.2-4			1.3.2	bio bio-phylogeny cloud
amap-align (PTS, VCS, UP)	2.2+git20080214.600fc29+dfsg-2	2.2+git20080214.600fc29+dfsg-2	2.2+git20080214.600fc29+dfsg-2			2.2+git20080214.600fc29	bio cloud
amide (PTS, VCS, UP)	1.0.6-5	1.0.6-6	1.0.6-7			1.0.6	imaging
amos (VCS, UP)					3.1.0-1		bio
ampliconnoise (PTS, VCS, UP)	1.29-15	1.29-16	1.29-16			1.29	bio cloud
andi (PTS, VCS, UP)	0.14-3	0.14-3	0.14-3			0.14	bio
ants (PTS, VCS, UP)	2.5.4+dfsg-1	2.5.4+dfsg-1	2.5.4+dfsg-1			2.6.3	imaging
any2fasta (PTS, VCS, UP)	0.4.2-2	0.4.2-2	0.4.2-2			0.4.2	bio
apollo (VCS, UP)					2.3.1-1		bio
aragorn (PTS, VCS, UP)	1.2.41-3	1.2.41-3	1.2.41-3			1.2.41	bio cloud
arb (PTS, VCS, UP)	6.0.6-8		6.0.6-8			7.0	bio
arden (PTS, VCS, UP)	1.0-6	1.0-6	1.0-6			0.No-Release	bio cloud
ariba (PTS, VCS, UP)	2.14.7+ds-7	2.14.7+ds-7	2.14.7+ds-7			2.14.7	bio
art-nextgen-simulation-tools (PTS, VCS, UP)	20160605+dfsg-5	20160605+dfsg-5	20160605+dfsg-5			2016.06.05	bio
artemis (PTS, VCS, UP)	18.2.0+dfsg-4	18.2.0+dfsg-5	18.2.0+dfsg-5			18.2.0	bio
artfastqgenerator (PTS, VCS, UP)	0.0.20150519-5	0.0.20150519-5	0.0.20150519-5			19_05_2015	bio
arvados (VCS, UP)					2.0.3-1		bio covid-19
assembly-stats (PTS, VCS, UP)	1.0.1+ds-6	1.0.1+ds-7	1.0.1+ds-7			1.0.1	bio covid-19
assemblytics (PTS, VCS, UP)	1.2.1+dfsg-2	1.2.1+dfsg-2	1.2.1+dfsg-2			1.2.1	bio
ataqv (PTS, VCS, UP)	1.3.1+ds-2	1.3.1+ds-2	1.3.1+ds-2			1.3.1	bio
atropos (PTS, VCS, UP)	1.1.32+dfsg-2	1.1.32+dfsg-2	1.1.32+dfsg-2			1.1.32	bio
augur (PTS, VCS, UP)	24.4.0-1	24.4.0-3	24.4.0-3			32.0.0	bio covid-19
augustus (PTS, VCS, UP)	3.5.0+dfsg-5	3.5.0+dfsg-5	3.5.0+dfsg-5			3.5.0	bio
auspice (VCS, UP)					2.10.0-1		covid-19
autodock-vina (PTS, VCS, UP)	1.2.7-1	1.2.7-1	1.2.7-1			1.2.7	bio cloud
autodocksuite (PTS, VCS, UP)	4.2.6-9	4.2.6-9	4.2.6-9			4.2.6	bio cloud
avogadro (PTS, VCS, UP)	1.100.0-2	1.101.0-1	1.101.0-1			1.102.0	bio
axe-demultiplexer (PTS, VCS, UP)	0.3.3+dfsg-4	0.3.3+dfsg-5	0.3.3+dfsg-5			0.3.3	bio
axparafit (VCS, UP)					1.0-1		bio
axpcoords (VCS, UP)					1.0-1		bio
bagpipe (VCS, UP)					2012.02.15-1		bio cloud
baitfisher (PTS, VCS, UP)	1.2.7+git20211020.de26d5c+dfsg-2	1.2.7+git20211020.de26d5c+dfsg-2	1.2.7+git20211020.de26d5c+dfsg-2			1.2.7+git20211020.de26d5c	bio
bali-phy (PTS, VCS, UP)	4.0-1	4.0-1	4.0-1	4.0~beta16+dfsg-1		4.1	bio
ball (PTS, VCS, UP)			1.5.0+git20180813.37fc53c-11.1			1.5.0+git20220524.d85d2dd	bio
bambamc (PTS, VCS, UP)	0.0.50-6	0.0.50-7	0.0.50-7			0_0_50	bio-dev
bamclipper (PTS, VCS, UP)	1.0.0-3	1.0.0-3	1.0.0-3			1.0.0	bio covid-19
bamkit (PTS, VCS, UP)	0.0.1+git20170413.ccd079d-3	0.0.1+git20170413.ccd079d-3	0.0.1+git20170413.ccd079d-3			0.0.1+git20170413.ccd079d	bio covid-19
bamtools (PTS, VCS, UP)	2.5.2+dfsg-6	2.5.3+dfsg-1	2.5.3+dfsg-1			2.5.3	bio bio-dev cloud
bandage (PTS, VCS, UP)	0.9.0-2	0.9.0-2	0.9.0-2			0.9.0	bio
barrnap (PTS, VCS, UP)	0.9+dfsg-4	0.9+dfsg-4	0.9+dfsg-4			0.9	bio
bart (PTS, VCS, UP)	0.9.00-3	0.9.00-3	0.9.00-3			0.9.00	imaging imaging-dev
bart-cuda (PTS, VCS, UP)			0.8.00-2			0.9.00	imaging
bart-view (PTS, VCS, UP)	0.3.00-1	0.3.00-1	0.3.00-1			0.3.00	imaging
bax2bam (VCS, UP)					0.0.9-1		bio
bbhash (PTS, VCS, UP)	1.0.0-6	1.0.0-7	1.0.0-7			1.0.0	bio-dev covid-19
bbmap (PTS, VCS, UP)	39.20+dfsg-2	39.20+dfsg-2	39.20+dfsg-2			39.38	bio covid-19
bcalm (PTS, VCS, UP)	2.2.3-5	2.2.3-6	2.2.3-6			2.2.3	bio covid-19
bcbio (PTS, VCS, UP)			1.2.9-4			1.2.9	bio bio-dev covid-19
bcftools (PTS, VCS, UP)	1.21-1	1.22-1	1.22-1			1.22	bio bio-ngs covid-19
beads (PTS, VCS, UP)	1.1.22-1	1.1.22+ds-1	1.1.22+ds-1			1.1.20	bio
beagle (PTS, VCS, UP)	241217-3	250227-2	250227-2			250227	bio
beast-mcmc (PTS, VCS, UP)	1.10.4+dfsg-7	1.10.4+dfsg-7	1.10.4+dfsg-7			10.5.0	bio bio-phylogeny
beast2-mcmc (PTS, VCS, UP)	2.7.6+dfsg-1	2.7.6+dfsg-1	2.7.6+dfsg-1			2.7.8	bio
bedops (PTS, VCS, UP)	2.4.41+dfsg-3	2.4.42+dfsg-1	2.4.42+dfsg-1			2.4.42	bio
bedtools (PTS, VCS, UP)	2.31.1+dfsg-2	2.31.1+dfsg-2	2.31.1+dfsg-2			2.31.1	bio bio-ngs cloud covid-19
berkeley-express (PTS, VCS, UP)	1.5.3+dfsg-3	1.5.3+dfsg-4	1.5.3+dfsg-4			1.5.3	bio
biber (PTS, VCS, UP)	2.20-2	2.21-2	2.21-2			2.21	typesetting
biceps (VCS, UP)					0.0.201401-1		bio
bifrost (PTS, VCS, UP)	1.3.1-1	1.3.5-2	1.3.5-2			1.3.5	bio bio-dev
bigsdb (VCS, UP)					1.18.1-1		bio
bio-eagle (PTS, VCS, UP)	2.4.1-3	2.4.1-3	2.4.1-3			2.4.1	bio
bio-formats (VCS, UP)					6.0.1+dfsg-1		imaging-dev
bio-rainbow (PTS, VCS, UP)	2.0.4+dfsg-2	2.0.4+dfsg-2	2.0.4+dfsg-2			2.0.4	bio
bio-tradis (PTS, VCS, UP)	1.4.5+dfsg2-2	1.4.5+dfsg2-2	1.4.5+dfsg2-2			1.4.5	bio bio-dev
bio-vcf (PTS, VCS, UP)	0.9.5-3	0.9.5-3	0.9.5-3			0.9.5	bio
bioawk (PTS, VCS, UP)	1.0-5	1.0-5	1.0-5			1.0	bio
biobambam2 (PTS, VCS, UP)	2.0.185+ds-2	2.0.185+ds-2	2.0.185+ds-2			2.0.185-release-20221211202123	bio bio-dev covid-19
bioimagesuite (VCS, UP)					2.0-1		imaging
bioimagexd (VCS, UP)					1.0-r1799-1		imaging
biojava-live (PTS, VCS, UP)	1.9.7+dfsg-2	1.9.7+dfsg-2	1.9.7+dfsg-2			1.9.7	bio-dev
biojava4-live (PTS, VCS, UP)	4.2.12+dfsg-8	4.2.12+dfsg-8	4.2.12+dfsg-8			4.2.12	bio-dev
biojava6-live (PTS, VCS, UP)	6.1.0+dfsg-5	6.1.0+dfsg-6	6.1.0+dfsg-6			6.1.0	bio-dev
biomaj3 (PTS, VCS, UP)	3.1.24-2	3.1.24-2	3.1.24-2			3.1.24	bio-dev
biomaj3-cli (PTS, VCS, UP)	3.1.11-5	3.1.11-5	3.1.11-5			3.1.11	cloud
biomaj3-daemon (PTS, VCS, UP)	3.0.24-3	3.0.24-3	3.0.24-3			3.0.24	bio
bioperl (PTS, VCS, UP)	1.7.8-1	1.7.8-2	1.7.8-2			1.7.8	bio-dev cloud
bioperl-run (PTS, VCS, UP)	1.7.3-13	1.7.3-13	1.7.3-13			1-7-3	bio-dev cloud
biosig (PTS, VCS, UP)	3.9.0-1	3.9.0-1	3.9.0-1			3.9.1	imaging imaging-dev physics
biosquid (PTS, VCS, UP)	1.9g+cvs20050121-15.1	1.9g+cvs20050121-15.1	1.9g+cvs20050121-15.1			1.9g	bio-dev cloud
biosyntax (PTS, VCS, UP)	1.0.0b-6	1.0.0b-6	1.0.0b-6			1.0.0	bio
bioxtasraw (PTS, VCS, UP)	2.3.0-2.1	2.3.1-1	2.3.1-1			2.3.1	bio imaging-dev psychology
bismark (VCS, UP)					0.22.3-1		bio
bitseq (PTS, VCS, UP)	0.7.5+dfsg-6	0.7.5+dfsg-7	0.7.5+dfsg-7			0.7.5	bio
blasr (PTS, VCS, UP)	5.3.5+dfsg-7	5.3.5+dfsg-8	5.3.5+dfsg-8				bio bio-ngs
blat (VCS, UP)					35-1		bio covid-19
blimps (PTS, VCS, UP)	3.9+ds-4	3.9+ds-4	3.9+ds-4				bio
blobology (VCS, UP)					0.0+20151216-1		bio
bmtk (PTS, VCS, UP)	1.1.1+ds-4	1.1.1+ds-4	1.1.1+ds-4			1.1.3	psychology
bolt-lmm (PTS, VCS, UP)	2.4.1+dfsg-2	2.4.1+dfsg-2	2.4.1+dfsg-2			2.5	bio
bowtie (PTS, VCS, UP)	1.3.1-3	1.3.1-3	1.3.1-3			1.3.1	bio bio-ngs cloud
bowtie2 (PTS, VCS, UP)	2.5.4-1	2.5.4-1	2.5.4-1			2.5.4	bio cloud covid-19
boxshade (PTS, VCS, UP)	3.3.1-14	3.3.1-14	3.3.1-14			0.No-Release	bio cloud
bppphyview (PTS, VCS, UP)	0.6.1-5	0.6.1-6	0.6.1-6			0.6.1	bio
bppsuite (PTS, VCS, UP)	2.4.1-7	2.4.1-8	2.4.1-8			2.4.1	bio
braker (VCS, UP)					2.1.2+dfsg-1		bio
brian (PTS, VCS, UP)	2.8.0.4-1	2.9.0-2	2.9.0-2			2.9.0	imaging-dev
brig (PTS, VCS, UP)	0.95+dfsg-3	0.95+dfsg-3	0.95+dfsg-3			0.95	bio
btllib (PTS, VCS, UP)	1.7.5+dfsg-2	1.7.5+dfsg-2	1.7.5+dfsg-2			1.7.5	bio bio-dev
busco (PTS, VCS, UP)	5.5.0-3	5.5.0-3	5.5.0-3				bio covid-19
bustools (PTS, VCS, UP)	0.43.2+dfsg-1	0.45.1+dfsg-1	0.45.1+dfsg-1			0.45.1	bio covid-19
bwa (PTS, VCS, UP)	0.7.18-1	0.7.19-1	0.7.19-1			0.7.19	bio bio-ngs cloud covid-19
camitk (PTS, VCS, UP)	5.2.0-5		5.2.0-5			5.2.0	imaging imaging-dev
camp (PTS, VCS, UP)	0.8.4-4.1	0.8.4-5	0.8.4-5			0.8.4	imaging-dev
canu (PTS, VCS, UP)			2.2+dfsg-5			2.3	bio
capsule-maven-nextflow (PTS, VCS, UP)	1.0.3.1+dfsg-5	1.0.3.1+dfsg-5	1.0.3.1+dfsg-5			1.0.3.1	bio-dev
capsule-nextflow (PTS, VCS, UP)	1.1.1+dfsg-1	1.1.1+dfsg-1	1.1.1+dfsg-1			1.1.1	bio-dev
card-rgi (VCS, UP)					4.2.2-1		bio
care2x (VCS, UP)					2.5~rc2-1		his
cassiopee (PTS, VCS, UP)	1.0.9-4	1.0.9-5	1.0.9-5			1.0.9	bio cloud
cat-bat (PTS, VCS, UP)	5.3-2	5.3-2	5.3-2			6.0.1	bio covid-19
catfishq (PTS, VCS, UP)	1.4.0+ds-1	1.4.0+ds-1	1.4.0+ds-1			1.4.0	bio
cct (PTS, VCS, UP)	1.0.3-1	1.0.3-1	1.0.3-1			1.0.3	bio
cd-hit (PTS, VCS, UP)	4.8.1-4	4.8.1-4	4.8.1-4			4.8.1	bio cloud
cdbfasta (PTS, VCS, UP)	1.00+git20230710.da8f5ba+dfsg-1	1.00+git20230710.da8f5ba+dfsg-1	1.00+git20230710.da8f5ba+dfsg-1			1.00+git20230710.da8f5ba	bio cloud
cdk (PTS, VCS, UP)	2.11-1	2.11-1	2.11-1			2.11	bio-dev
cellprofiler (VCS, UP)					3.0.0-1		bio imaging
centrifuge (PTS, VCS, UP)	1.0.4.2-1	1.0.4.2-1	1.0.4.2-1			1.0.4.2	bio covid-19
cgview (PTS, VCS, UP)	0.0.20100111-7	0.0.20100111-7	0.0.20100111-7			0.No-Release	bio
changeo (PTS, VCS, UP)	1.3.0-3	1.3.0-3	1.3.0-3			1.3.4	bio covid-19
chemtool (PTS, VCS, UP)	1.6.14-6	1.6.14-6	1.6.14-6			1.6.14	pharmacy
chime (VCS, UP)					0.2.1-1		covid-19 epi
chip-seq (PTS, VCS, UP)	1.5.5-3	1.5.5-3	1.5.5-3			1.5.5	covid-19
chromhmm (PTS, VCS, UP)	1.26+dfsg-3	1.27+dfsg-1	1.27+dfsg-1			1.27	bio
chromimpute (PTS, VCS, UP)	1.0.3+dfsg-5	1.0.3+dfsg-5	1.0.3+dfsg-5			1.0.3	bio
cif-tools (PTS, VCS, UP)	1.0.12-4	1.0.12-5	1.0.12-5			1.0.12	bio
ciftilib (PTS, VCS, UP)	1.6.0-2.1	1.6.0-5	1.6.0-5			1.6.0	imaging-dev
cimg (PTS, VCS, UP)	3.5.2+dfsg-1	3.5.2+dfsg-1	3.5.2+dfsg-1			3.6.3	imaging-dev
cinema (VCS, UP)					3.0.23-1		bio
circlator (PTS, VCS, UP)			1.5.6-13			1.5.5	bio
circos (PTS, VCS, UP)	0.69.9+dfsg-2	0.69.9+dfsg-2	0.69.9+dfsg-2				bio cloud
clearcut (PTS, VCS, UP)	1.0.9+git20211013.b799afe-1	1.0.9+git20211013.b799afe-1	1.0.9+git20211013.b799afe-1			1.0.9+git20211013.b799afe	bio cloud
clonalframe (PTS, VCS, UP)	1.2-11	1.2-11	1.2-11			1.2	bio cloud
clonalframeml (PTS, VCS, UP)	1.13-1	1.13-1	1.13-1			1.13	bio covid-19
clonalorigin (PTS, VCS, UP)	1.0-8	1.0-8	1.0-8			1.0	bio
clustalo (PTS, VCS, UP)	1.2.4-8	1.2.4-8	1.2.4-8			1.2.4	bio cloud
clustalw (PTS, VCS, UP)	2.1+lgpl-7	2.1+lgpl-7	2.1+lgpl-7			2.1	bio bio-phylogeny cloud
clustalx (PTS, VCS, UP)	2.1+lgpl-9	2.1+lgpl-9	2.1+lgpl-9			2.1	bio bio-phylogeny
cmtk (PTS, VCS, UP)	3.3.1p2+dfsg-3	3.3.1p2+dfsg-3	3.3.1p2+dfsg-3			3.4.0	imaging
cnvkit (PTS, VCS, UP)	0.9.12-1	0.9.12-1	0.9.12-1			0.9.12	bio
codonw (PTS, VCS, UP)	1.4.4-8	1.4.4-8	1.4.4-8			1_4_4	bio
coils (PTS, VCS, UP)	2002-9	2002-10	2002-10			0.No-Release	bio cloud
comet-ms (PTS, VCS, UP)	2019015+cleaned1-4.1	2019015+cleaned1-4.1	2019015+cleaned1-4.1			2021010	bio
compclust (VCS, UP)					1.3+dfsg-1		bio-dev
concavity (PTS, VCS, UP)	0.1+dfsg.1-6	0.1+dfsg.1-6	0.1+dfsg.1-6			0.No-Release	bio cloud
concurrentqueue (PTS, VCS, UP)	1.0.4+ds-2	1.0.4+ds-2	1.0.4+ds-2			1.0.4	bio-dev
conda-package-handling (PTS, VCS, UP)	2.3.0-1	2.3.0-1	2.3.0-1			2.4.0	bio bio-dev
conda-package-streaming (PTS, VCS, UP)	0.10.0-1	0.10.0-1	0.10.0-1			0.12.0	bio-dev
condetri (VCS, UP)					2.3-1		bio
consensuscore (PTS, VCS, UP)	1.1.1+dfsg-8	1.1.1+dfsg-8	1.1.1+dfsg-8			0.No-Release	bio-dev
conservation-code (PTS, VCS, UP)	20110309.0-8	20110309.0-8	20110309.0-8			0.No-Release	bio cloud
contrafold (VCS, UP)					2.02-1		bio
coot (PTS, VCS, UP)	1.1.15+dfsg-1		1.1.15+dfsg-1	1.1.18+dfsg-1		1.1.19	bio
covpipe (VCS, UP)					3.0.6-1		bio covid-19
covtobed (PTS, VCS, UP)	1.3.5+dfsg-2	1.3.5+dfsg-2	1.3.5+dfsg-2			1.4.0	bio
crac (PTS, VCS, UP)	2.5.2+dfsg-6	2.5.2+dfsg-6	2.5.2+dfsg-6				bio
crea (VCS, UP)					0.0.20131107-1		imaging
cronometer (PTS, VCS, UP)	0.9.9+dfsg1-2	0.9.9+dfsg1-2	0.9.9+dfsg1-2			0.9.9	tools
crossbow (VCS, UP)					1.2.0-1		bio
crux (VCS, UP)					3.1-1		bio
ctdconverter (PTS, VCS, UP)	2.1-8	2.1-8	2.1-8			3.0a1	bio-dev
ctdopts (PTS, VCS, UP)	1.5-5	1.5-5	1.5-5			1.5	bio-dev
ctffind (PTS, VCS, UP)	4.1.14-3	4.1.14-3	4.1.14-3			5.0.2	bio
cthreadpool (PTS, VCS, UP)	0.0+git20231218.4eb5a69-2	0.0+git20231218.4eb5a69-2	0.0+git20231218.4eb5a69-2			0.0+git20250518.2b56942	bio-dev
ctk (VCS, UP)					0.1.0+git20160903~cdb75ce-1		imaging-dev
ctn (PTS, VCS, UP)	3.2.0~dfsg-8	3.2.0~dfsg-9	3.2.0~dfsg-9			3.2.0	imaging imaging-dev
ctsim (PTS, VCS, UP)	6.0.2-6	6.0.2-6	6.0.2-6			6.0.2	imaging
cufflinks (PTS, VCS, UP)	2.2.1+dfsg.1-10		2.2.1+dfsg.1-10			2.2.1	bio cloud
cutesv (PTS, VCS, UP)	2.1.1-1	2.1.1-1	2.1.1-1			2.1.3	bio
cwlformat (PTS, VCS, UP)	2022.02.18-3	2022.02.18-3	2022.02.18-3			2022.02.18	bio-dev
cwltest (PTS, VCS, UP)	2.5.20241122133319-1	2.6.20250818005349-2	2.6.20250818005349-2			2.6.20250818005349	bio-dev
cwltool (PTS, VCS, UP)	3.1.20250110105449-3	3.1.20250925164626-1	3.1.20250925164626-1			3.1.20250925164626	bio-dev covid-19
cycle (PTS, VCS, UP)	0.3.3-2	0.3.3-2	0.3.3-2			0.3.3	tools
cytoscape (VCS, UP)					3.1.0-1		bio
cyvcf2 (PTS, VCS, UP)	0.31.1-2	0.31.1-2	0.31.1-2			0.31.4	bio bio-dev covid-19
daligner (PTS, VCS, UP)	1.0+git20240119.335105d-3	1.0+git20240119.335105d-3	1.0+git20240119.335105d-3			1.0+git20240119.335105d	bio bio-ngs
damapper (PTS, VCS, UP)	0.0+git20240314.b025cf9-1	0.0+git20240314.b025cf9-1	0.0+git20240314.b025cf9-1			0.0+git20240314.b025cf9	bio
dascrubber (PTS, VCS, UP)	1.1-4	1.1-4	1.1-4			1.1	bio
datamash (PTS, VCS, UP)	1.9-1	1.9-1	1.9-1			1.9	bio cloud
dawg (PTS, VCS, UP)	1.2-4	1.2-5	1.2-5			1.2	bio
dazzdb (PTS, VCS, UP)	1.0+git20250217.a3eefd4-1	1.0+git20250217.a3eefd4-1	1.0+git20250217.a3eefd4-1			1.0+git20250217.a3eefd4	bio
dazzle (VCS, UP)					1.01r3643-1		bio
dcm2niix (PTS, VCS, UP)	1.0.20241211-1	1.0.20250506-1	1.0.20250506-1			1.0.20250506	imaging
dcm4che (VCS, UP)					5.10.6-1		imaging
dcmstack (PTS, VCS, UP)	0.9-3	0.9-3	0.9-3			0.9	imaging-dev
dcmtk (PTS, VCS, UP)	3.6.9-5	3.6.9-5	3.6.9-5			3.6.9	covid-19 imaging
debian-science (PTS, VCS, UP)	1.15	1.15	1.15				bio imaging psychology statistics
deblur (PTS, VCS, UP)	1.1.1-4	1.1.1-4	1.1.1-4			1.1.1	bio
deepbinner (VCS, UP)					0.2.0-1		bio
delly (PTS, VCS, UP)	1.1.8-1	1.1.8-1	1.1.8-1			1.5.0	bio covid-19
dendroscope (VCS, UP)					3.0+git20190219.a00d9b9+dfsg-1		bio
density-fitness (PTS, VCS, UP)	1.1.3-1	1.1.4-2	1.1.4-2			1.1.4	bio
dextractor (PTS, VCS, UP)	1.0-6	1.0-6	1.0-6			1.0	bio covid-19
dialign (PTS, VCS, UP)	2.2.1-13	2.2.1-13	2.2.1-13			2.2.1	bio bio-phylogeny cloud
dialign-t (PTS, VCS, UP)	1.0.2-15	1.0.2-15	1.0.2-15				bio bio-phylogeny cloud
diamond-aligner (PTS, VCS, UP)	2.1.11-2	2.1.14-1	2.1.14-1			2.1.14	bio covid-19
diann (VCS, UP)					1.8+dfsg-1		bio
dicom3tools (PTS, VCS, UP)	1.00~20240118131615-1	1.00~20240118131615-1	1.00~20240118131615-1			1.00.snapshot.20251020111927	imaging
dicomscope (PTS, VCS, UP)	3.6.0-27	3.6.0-28	3.6.0-28			3.6.0	imaging
dicoogle (VCS, UP)					2.5.0-1		imaging
dipy (PTS, VCS, UP)	1.11.0-2	1.11.0-2	1.11.0-2			1.11.0	imaging imaging-dev
discosnp (PTS, VCS, UP)	2.6.2-4	2.6.2-5	2.6.2-5			2.6.2	bio cloud covid-19
disulfinder (PTS, VCS, UP)	1.2.11-12		1.2.11-12			0.No-Site	bio cloud
dnaclust (PTS, VCS, UP)	3-7	3-7	3-7			3	bio cloud
dnapi (PTS, VCS, UP)	1.1-3	1.1-3	1.1-3			1.1	bio
dnarrange (PTS, VCS, UP)	1.5.3-1.1	1.5.3-1.1	1.5.3-1.1			1.6.3	bio
drmaa (PTS, VCS, UP)		0.7.9-3	0.7.9-3			0.7.9	covid-19
drop-seq (PTS, VCS, UP)	3.0.2+dfsg-1	3.0.2+dfsg-2	3.0.2+dfsg-2			3.0.2	bio covid-19
dssp (PTS, VCS, UP)	4.4.10-1	4.5.5-1	4.5.5-1			4.5.6	bio cloud
dwgsim (PTS, VCS, UP)	0.1.14-3	0.1.14-4	0.1.14-4			0.1.14	bio
e-mem (PTS, VCS, UP)	1.0.1-5	1.0.1-5	1.0.1-5			1.0.1	bio
ea-utils (PTS, VCS, UP)	1.1.2+dfsg-9	1.1.2+dfsg-9	1.1.2+dfsg-9			0.No-Track	bio
ecell (VCS, UP)					3.2.2-1		bio
ecopcr (PTS, VCS, UP)	1.0.1+dfsg-5	1.0.1+dfsg-5	1.0.1+dfsg-5				bio
edfbrowser (PTS, VCS, UP)	2.12+dfsg-1	2.13+dfsg-1	2.13+dfsg-1			213	tools
edflib (PTS, VCS, UP)	1.27-1	1.27-2	1.27-2			v1.27	imaging-dev
edtsurf (PTS, VCS, UP)	0.2009-10	0.2009-10	0.2009-10			0.No-Release	bio
eegdev (PTS, VCS, UP)	0.2-10	0.2-10	0.2-10			0.2	imaging-dev
eigensoft (PTS, VCS, UP)	8.0.0+dfsg-2	8.0.0+dfsg-2	8.0.0+dfsg-2			8.0.0	bio
elastix (PTS, VCS, UP)	5.2.0-2	5.2.0-2	5.2.0-2			5.2.0	imaging
elph (PTS, VCS, UP)	1.0.1-5	1.0.1-5	1.0.1-5				bio
embassy-domainatrix (PTS, VCS, UP)	0.1.660-5	0.1.660-5	0.1.660-5				bio cloud
embassy-domalign (PTS, VCS, UP)	0.1.660-5	0.1.660-5	0.1.660-5				bio cloud
embassy-domsearch (PTS, VCS, UP)	0.1.660-4	0.1.660-4	0.1.660-4				bio cloud
embassy-phylip (VCS, UP)					3.69.660-4		bio cloud
emboss (PTS, VCS, UP)	6.6.0+dfsg-15	6.6.0+dfsg-18	6.6.0+dfsg-18				bio cloud
emboss-explorer (PTS, VCS, UP)	2.2.0-12	2.2.0-12	2.2.0-12			2.2.0	bio
emmax (PTS, VCS, UP)	0~beta.20100307-5	0~beta.20100307-6	0~beta.20100307-6			0.No-Release	bio
emperor (PTS, VCS, UP)	1.0.4+ds-1	1.0.4+ds-2	1.0.4+ds-2			1.0.4	bio
ensembl (VCS, UP)					98+git20190619.e98e194-1		bio
ensembl-vep (VCS, UP)					100.2-1		bio covid-19
entangle (PTS, VCS, UP)	3.0-4	3.0-5	3.0-5			3.0	dental practice tools
epcr (PTS, VCS, UP)	2.3.12-1-10	2.3.12-1-10	2.3.12-1-10			0.No-Release	bio cloud
epifire (VCS, UP)					3.34.0+dfsg-1		epi
estscan (PTS, VCS, UP)	3.0.3-6	3.0.3-6	3.0.3-6			3.0.3	bio
euler-sr (VCS, UP)					1.1.2-1		bio
euler2 (VCS, UP)					2.0-1		bio
exabayes (VCS, UP)					1.5+dfsg-1		bio
examl (PTS, VCS, UP)	3.0.22-6	3.0.22-6	3.0.22-6			3.0.22	bio
exonerate (PTS, VCS, UP)	2.4.0-5	2.4.0-5	2.4.0-5				bio bio-phylogeny cloud
fast5 (PTS, VCS, UP)	0.6.5-9	0.6.5-9	0.6.5-9			0.6.5	bio-dev
fasta3 (PTS, VCS, UP)	36.3.8i.14-Nov-2020-3	36.3.8i.14-Nov-2020-4	36.3.8i.14-Nov-2020-4			36.3.8i_14-Nov-2020	bio covid-19
fastani (PTS, VCS, UP)	1.33-3	1.33-3	1.33-3				bio covid-19
fastaq (PTS, VCS, UP)	3.17.0-9	3.17.0-9	3.17.0-9			3.17.0	bio
fastdnaml (PTS, VCS, UP)	1.2.2-18	1.2.2-18	1.2.2-18			1.2.2	bio bio-phylogeny cloud
fastlink (PTS, VCS, UP)	4.1P-fix100+dfsg-5	4.1P-fix100+dfsg-6	4.1P-fix100+dfsg-6			0.No-Release	bio cloud
fastml (PTS, VCS, UP)	3.11-4	3.11-4	3.11-4			0.No-Site	bio
fastp (PTS, VCS, UP)	0.24.0+dfsg-1	1.0.1+dfsg-1	1.0.1+dfsg-1			1.0.1	bio covid-19
fastq-pair (PTS, VCS, UP)	1.0-3	1.0-3	1.0-3			1.0	bio
fastqc (PTS, VCS, UP)	0.12.1+dfsg-4	0.12.1+dfsg-4	0.12.1+dfsg-4			0.12.1	bio cloud covid-19
fastqtl (PTS, VCS, UP)	2.184+v7+dfsg-4	2.184+v7+dfsg-4	2.184+v7+dfsg-4				bio
fasttree (PTS, VCS, UP)	2.1.11-2	2.1.11-2	2.1.11-2				bio bio-phylogeny cloud
fermi-lite (PTS, VCS, UP)	0.1+git20221215.85f159e-1	0.1+git20221215.85f159e-1	0.1+git20221215.85f159e-1			0.1+git20221215.85f159e	bio bio-dev
ffindex (PTS, VCS, UP)	0.9.9.9-7	0.9.9.9-7	0.9.9.9-7			0.9.9.9	bio bio-dev
ffp (VCS, UP)					3.19-1		bio
fieldbioinformatics (VCS, UP)					1.1.3-1		bio covid-19
figtree (PTS, VCS, UP)	1.4.4-6	1.4.4-6	1.4.4-6			1.4.4	bio bio-phylogeny
fiji (VCS, UP)					2.3.1-1		imaging
filtlong (PTS, VCS, UP)	0.2.1-4	0.2.1-4	0.2.1-4			0.3.1	bio covid-19
fis-gtm (PTS, VCS, UP)	7.1-006-1	7.1-008-1	7.1-008-1			7.1-009	his
fitgcp (PTS, VCS, UP)	0.0.20150429-5	0.0.20150429-5	0.0.20150429-5			0.No-Release	bio cloud
flappie (VCS, UP)					2.1.3+ds-1		bio covid-19
flash (PTS, VCS, UP)	1.2.11-2	1.2.11-2	1.2.11-2			1.2.11	bio covid-19
flexbar (PTS, VCS, UP)	3.5.0-5	3.5.0-7	3.5.0-7			3.5.0	bio cloud
flye (PTS, VCS, UP)	2.9.5+dfsg-1	2.9.6+dfsg-1	2.9.6+dfsg-1			2.9.6	bio covid-19
foreign (PTS, VCS, UP)	0.8.90-1	0.8.90-1	0.8.90-1			0.8-90	psychology
forester (VCS, UP)					0.0+20180205-1		bio bio-dev bio-phylogeny
freebayes (PTS, VCS, UP)	1.3.9-1	1.3.9-1	1.3.9-1	1.3.7-1~exp		1.3.10	bio covid-19
freecontact (PTS, VCS, UP)	1.0.21-15	1.0.21-16	1.0.21-16				bio bio-dev cloud
freeimage (PTS, VCS, UP)	3.18.0+ds2-11	3.18.0+ds2-11	3.18.0+ds2-11				imaging-dev
freeshim (VCS, UP)					0.1.1+20110502-1		practice
freesurfer (VCS, UP)					5.1.0+dev+cvs20120104-1		imaging
fsa (PTS, VCS, UP)	1.15.9+dfsg-6	1.15.9+dfsg-6	1.15.9+dfsg-6			1.15.9	bio
fsm-lite (PTS, VCS, UP)	1.0-8	1.0-8	1.0-8			1.0	bio
galaxy (VCS, UP)					16.10-1		bio
galaxy-lib (VCS, UP)					19.5.2-1		bio-dev
galileo (PTS, VCS, UP)	0.5.1-11	0.5.1-11	0.5.1-11			0.5.1	tools
garli (PTS, VCS, UP)	2.1-9	2.1-9	2.1-9			2.1	bio
garlic (PTS, VCS, UP)	1.6-3	1.6-3	1.6-3			1.6	bio
gasic (PTS, VCS, UP)	0.0.r19-8	0.0.r19-8	0.0.r19-8			r16	bio cloud
gatb-core (PTS, VCS, UP)	1.4.2+dfsg-13	1.4.2+dfsg-13	1.4.2+dfsg-13			1.4.2	bio bio-dev
gatk (VCS, UP)					4.2.0.0+dfsg-1		bio
gatk-bwamem (PTS, VCS, UP)	1.0.4+dfsg2-3		1.0.4+dfsg2-3				bio-dev
gatk-fermilite (PTS, VCS, UP)	1.2.1+dfsg-2	1.2.1+dfsg-2	1.2.1+dfsg-2			1.2.1	bio-dev
gatk-native-bindings (PTS, VCS, UP)	1.0.0+dfsg-2	1.1.0+dfsg-1	1.1.0+dfsg-1			1.1.0	bio-dev
gbrowse (PTS, VCS, UP)	2.56+dfsg-12	2.56+dfsg-12	2.56+dfsg-12			2.56	bio
gdcm (PTS, VCS, UP)	3.0.24-5	3.0.24-6	3.0.24-6			3.2.2	covid-19 imaging imaging-dev
gdpc (PTS, VCS, UP)	2.2.5-16	2.2.5-16	2.2.5-16			0.No-Release	bio
gemma (PTS, VCS, UP)	0.98.5+dfsg-3	0.98.5+dfsg-3	0.98.5+dfsg-3			0.98.5	bio
genometester (PTS, VCS, UP)	4.0+git20200511.91cecb5+dfsg-1	4.0+git20200511.91cecb5+dfsg-1	4.0+git20200511.91cecb5+dfsg-1			4.0+git20221122.71e6625	bio
genomethreader (PTS, VCS, UP)	1.7.3+dfsg-10	1.7.3+dfsg-10	1.7.3+dfsg-10			1.7.3	bio
genometools (PTS, VCS, UP)	1.6.5+ds-2.2	1.6.6+ds-1	1.6.6+ds-1			1.6.6	bio bio-dev cloud covid-19
genomicsdb (PTS, VCS, UP)		1.5.5-2	1.5.5-2			1.5.5	bio bio-dev
gentle (PTS, VCS, UP)	1.9.5~alpha2+dfsg1-2	1.9.5~alpha2+dfsg1-2	1.9.5~alpha2+dfsg1-2			1.9.5.alpha2	bio
gerp++ (VCS, UP)					2.1-1		bio
getdata (PTS, VCS, UP)	0.2-4	0.2-4	0.2-4			0.No-Track	bio
gfapy (PTS, VCS, UP)	1.2.3+dfsg-3	1.2.3+dfsg-3	1.2.3+dfsg-3			1.2.3	bio-dev
gff2aplot (PTS, VCS, UP)	2.0-15	2.0-15	2.0-15			2.0	bio cloud
gff2ps (PTS, VCS, UP)	0.98l-6	0.98l-6	0.98l-6			0.98l	bio cloud
gffread (PTS, VCS, UP)	0.12.7-8	0.12.7-8	0.12.7-8			0.12.7	bio bio-dev covid-19
ggd-utils (PTS, VCS, UP)	1.0.0+ds-1	1.0.0+ds-1	1.0.0+ds-1			1.0.0	bio
ghmm (PTS, VCS, UP)	0.9~rc3-11	0.9~rc3-11.1	0.9~rc3-11.1			0.9-rc3	bio
gifticlib (PTS, VCS, UP)	1.0.9-6	1.0.9-7	1.0.9-7			1.0.9	imaging-dev
glam2 (PTS, VCS, UP)	1064-10	1064-10	1064-10			0.No-Site	bio cloud
gmap (PTS, VCS, UP)	2024-11-20+ds-2	2025-07-31+ds-1	2025-07-31+ds-1			2025-07-31	bio bio-phylogeny cloud
gmic (PTS, VCS, UP)	2.9.4-4.1	2.9.4-4.1	2.9.4-4.1			3.6.3	imaging-dev
gnumed-client (PTS, VCS, UP)	1.8.21+dfsg-1	1.8.21+dfsg-1	1.8.21+dfsg-1			1.8.22	covid-19 practice
gnumed-server (PTS, VCS, UP)	22.31-1	22.31-1	22.31-1			22.32	covid-19 practice
golang-github-biogo-hts (PTS, VCS, UP)	1.4.5+dfsg1-2	1.4.5+dfsg1-2	1.4.5+dfsg1-2			1.4.5	bio-dev
goldencheetah (PTS, VCS, UP)	3.5-7	3.5-7	3.5-7			3.7	tools
grabix (PTS, VCS, UP)	0.1.7-5	0.1.7-5	0.1.7-5			0.1.7	bio
gramalign (VCS, UP)					3.0-1		bio
graphbin (VCS, UP)					1.1-1		bio
graphlan (PTS, VCS, UP)	1.1.3-6	1.1.3-6	1.1.3-6			1.1.3	bio
graphmap2 (VCS, UP)					0.6.4-1		bio covid-19
grinder (PTS, VCS, UP)	0.5.4-6	0.5.4-6	0.5.4-6			0.5.4	bio cloud
gromacs (PTS, VCS, UP)	2025.2-1	2025.3-1	2025.3-1			2025.3	bio cloud covid-19
gsort (PTS, VCS, UP)	0.1.4-3	0.1.4-3	0.1.4-3			0.1.4	bio
gubbins (PTS, VCS, UP)	3.4-2	3.4-2	3.4-2			3.4.3	bio covid-19
gwama (PTS, VCS, UP)	2.2.2+dfsg-6	2.2.2+dfsg-6	2.2.2+dfsg-6				bio
gwyddion (PTS, VCS, UP)	2.67-1	2.67-1	2.67-1			3.5	imaging
haploview (VCS, UP)					4.1-1		bio
harvest-tools (PTS, VCS, UP)	1.3-8	1.3-8	1.3-8			1.3	bio
hdf5 (PTS, VCS, UP)	1.14.5+repack-3	1.14.5+repack-4	1.14.5+repack-4	1.14.6+repack-1~exp9		1.14.6	bio bio-dev
heudiconv (PTS, VCS, UP)	1.3.2-1		1.3.2-1			1.3.4	imaging
hhsuite (PTS, VCS, UP)	3.3.0+ds-8	3.3.0+ds-9	3.3.0+ds-9			3.3.0	bio cloud
hilive (PTS, VCS, UP)				2.0a-5			bio
hinge (PTS, VCS, UP)	0.5.0-7		0.5.0-8			0.5.0	bio
hisat2 (PTS, VCS, UP)	2.2.1-5	2.2.1-5	2.2.1-5			2.2.1	bio cloud
hmmer (PTS, VCS, UP)	3.4+dfsg-2	3.4+dfsg-3	3.4+dfsg-3			3.4	bio bio-phylogeny cloud
hmmer2 (PTS, VCS, UP)	2.3.2+dfsg-12	2.3.2+dfsg-12	2.3.2+dfsg-12			2.3.2	bio
hnswlib (PTS, VCS, UP)	0.8.0-1	0.8.0-1	0.8.0-1			0.8.0	bio
htqc (VCS, UP)					1.92.3-1		bio
hts-nim-tools (PTS, VCS, UP)		0.2.1-4	0.2.1-4			0.2.1	bio
htscodecs (PTS, VCS, UP)	1.6.1-2	1.6.1-2	1.6.1-2			1.6.4	bio-dev covid-19
htseq (PTS, VCS, UP)	2.0.9+dfsg-1	2.0.9+dfsg-1	2.0.9+dfsg-1			2.0.9	bio bio-dev covid-19
htsjdk (PTS, VCS, UP)	4.1.3+dfsg-2	4.1.3+dfsg-2	4.1.3+dfsg-2			4.3.0	bio-dev
htslib (PTS, VCS, UP)	1.21+ds-1	1.22.1+ds2-1	1.22.1+ds2-1			1.22.1	bio bio-dev bio-ngs cloud
hunspell-en-med (PTS, VCS, UP)	0.0.20140410-6	0.0.20140410-6	0.0.20140410-6			0.0.20140410	tools
hyphy (PTS, VCS, UP)	2.5.69+dfsg-1	2.5.69+dfsg-1	2.5.69+dfsg-1			2.5.84	bio
icb-utils (PTS, VCS, UP)	2.0.1+git20161002.afee1d9-5	2.0.1+git20161002.afee1d9-5	2.0.1+git20161002.afee1d9-5			2.0.1+git20161002.afee1d9	bio-dev
idba (PTS, VCS, UP)	1.1.3-8	1.1.3-8	1.1.3-8			1.1.3	bio cloud
idefix (VCS, UP)					1.3-1		bio
idseq-bench (PTS, VCS, UP)		0.0~git20210602.27fb6dc-2	0.0~git20210602.27fb6dc-2				bio
idseq-dag (VCS, UP)					4.2.3-1		covid-19
igor (PTS, VCS, UP)	1.4.0+dfsg-5	1.4.0+dfsg-5	1.4.0+dfsg-5			1.4.0	bio
igv (PTS, VCS, UP)	2.18.5+dfsg-1	2.18.5+dfsg-1	2.18.5+dfsg-1			2.19.6	bio
illustrate (PTS, VCS, UP)	0.0+git20200923.217db48-2	0.0+git20200923.217db48-2	0.0+git20200923.217db48-2			0.0+git20240817.e469df4	bio imaging
imagej (PTS, VCS, UP)	1.54g-1	1.54g-1	1.54g-1				covid-19 imaging
imagemagick (PTS, VCS, UP)	7.1.1.43+dfsg1-1+deb13u1	7.1.2.3+dfsg1-1	7.1.2.7+dfsg1-1				imaging
imagetooth (PTS, VCS, UP)	2.0.1-4	2.0.1-4	2.0.1-4			2.0.1	dental
imview (PTS, VCS, UP)	1.1.9h-4	1.1.9h-4	1.1.9h-4			0.No-Release	imaging
indelible (PTS, VCS, UP)	1.03-6	1.03-6	1.03-6			0.No-Site	bio
infernal (PTS, VCS, UP)	1.1.5-3	1.1.5-3	1.1.5-3			1.1.5	bio cloud
insightapplications (VCS, UP)					3.20.0-1.1		imaging
insighttoolkit5 (PTS, VCS, UP)	5.4.3-5	5.4.4-1	5.4.4-1			5.4.4	imaging-dev
insilicoseq (PTS, VCS, UP)	2.0.1-1	2.0.1-1	2.0.1-1			2.0.1	bio
inspect (VCS, UP)					0.0.20120109-1		bio
intake (PTS, VCS, UP)			0.6.6-4			2.0.8	bio bio-dev
invesalius (PTS, VCS, UP)	3.1.99998-7	3.1.99998-7	3.1.99998-7			3.1.99998	imaging
ipig (PTS, VCS, UP)	0.0.r5-5	0.0.r5-5	0.0.r5-5			r5	bio
iqtree (PTS, VCS, UP)	2.0.7+dfsg-1	2.0.7+dfsg-2	2.0.7+dfsg-2			2.0.7	bio bio-phylogeny
ismrmrd (PTS, VCS, UP)	1.8.0-2	1.8.0-2	1.8.0-2			1.14.3	imaging imaging-dev
iva (PTS, VCS, UP)	1.0.11+ds-6	1.0.11+ds-6	1.0.11+ds-6			1.0.11	bio
ivar (PTS, VCS, UP)	1.4.4+dfsg-1	1.4.4+dfsg-1	1.4.4+dfsg-1			1.4.4	covid-19
jaligner (PTS, VCS, UP)	1.0+dfsg-11	1.0+dfsg-11	1.0+dfsg-11			1.0	bio
jalview (PTS, VCS, UP)	2.11.4.1+dfsg-1	2.11.5.0+dfsg-1	2.11.5.0+dfsg-1			2_11_5_0	bio
jbrowse (VCS, UP)					1.2.3-1		bio
jebl2 (PTS, VCS, UP)	0.1+git20230701.b3c0f25-1	0.1+git20230701.b3c0f25-1	0.1+git20230701.b3c0f25-1			0.1+git20231105.51da3b1	bio-dev
jellyfish (PTS, VCS, UP)	2.3.1-4	2.3.1-4	2.3.1-4			2.3.1	bio cloud
jellyfish1 (PTS, VCS, UP)	1.1.11-10	1.1.11-10	1.1.11-10			1.1.11	bio
jist (VCS, UP)					2.0.20100907.dfsg1-1		imaging
jmodeltest (PTS, VCS, UP)			2.1.10+dfsg-12			2.1.10	bio bio-phylogeny
jmol (PTS, VCS, UP)	16.2.33+dfsg-1	16.2.33+dfsg-1	16.2.33+dfsg-1			16.2.37	bio
joypy (PTS, VCS, UP)	0.2.6-1	0.2.6-1	0.2.6-1			0.2.6	bio-dev
kalign (PTS, VCS, UP)	3.4.0-1	3.4.0-1	3.4.0-1			3.4.6-rc1	bio bio-phylogeny cloud covid-19
kallisto (PTS, VCS, UP)	0.48.0+dfsg-4	0.48.0+dfsg-4	0.48.0+dfsg-4			0.51.1	bio covid-19
kaptive (PTS, VCS, UP)	2.0.8-1	2.0.8-1	2.0.8-1			3.1.0	bio
kbibtex (PTS, VCS, UP)	0.10.0-4	0.10.0-4	0.10.0-4			0.10.0	typesetting
kempbasu (VCS, UP)					0.9.1-1		bio
khmer (PTS, VCS, UP)				3.0.0~a3+dfsg-9~0exp			bio
kineticstools (PTS, VCS, UP)	0.6.1+git20220223.1326a4d+dfsg-6		0.6.1+git20220223.1326a4d+dfsg-7			0.6.1+git20220223.1326a4d	bio bio-dev
king (PTS, VCS, UP)	2.24+dfsg2-2	2.24+dfsg2-2	2.24+dfsg2-2			2.24	imaging typesetting
king-probe (PTS, VCS, UP)	02.21-1	02.21-1	02.21-1			02.26	bio
kissplice (PTS, VCS, UP)	2.6.7-2	2.6.7-2	2.6.7-2			2.6.7	bio cloud
kleborate (PTS, VCS, UP)	2.4.1-5	2.4.1-5	2.4.1-5			3.2.4	bio
kma (PTS, VCS, UP)	1.4.21-1	1.4.21-1	1.4.21-1			1.6.7	bio
kmc (PTS, VCS, UP)	3.2.4+dfsg-1	3.2.4+dfsg-1	3.2.4+dfsg-1			3.2.4	bio
kmer (PTS, VCS, UP)	0~20150903+r2013-9	0~20150903+r2013-10	0~20150903+r2013-10			0.No-Release	bio bio-dev
kmerresistance (PTS, VCS, UP)	2.2.0-4	2.2.0-4	2.2.0-4			2.2.0	bio
kradview (VCS, UP)					1.1.0-2		imaging
kraken (PTS, VCS, UP)	1.1.1-4	1.1.1-4	1.1.1-4			1.1.1	bio
kraken2 (PTS, VCS, UP)	2.1.3-1	2.1.3-1	2.1.3-1			2.14	bio covid-19
lagan (PTS, VCS, UP)	2.0-10	2.0-10	2.0-10				bio
lamarc (PTS, VCS, UP)	2.1.10.1+dfsg-7	2.1.10.1+dfsg-7	2.1.10.1+dfsg-7				bio
lamassemble (PTS, VCS, UP)	1.7.2-2	1.7.2-2	1.7.2-2			1.7.4	bio
lambda-align (PTS, VCS, UP)	1.0.3-6	1.0.3-8	1.0.3-8			1.0.3	bio
lambda-align2 (PTS, VCS, UP)	2.0.1-3	2.0.1-3.1	2.0.1-3.1			2.0.1	bio
last-align (PTS, VCS, UP)	1609-1	1645-1	1645-1			1648	bio bio-ngs cloud
lastz (PTS, VCS, UP)	1.04.22-2	1.04.52-1	1.04.52-1			1.04.52	bio covid-19
lefse (PTS, VCS, UP)	1.1.2-2	1.1.2-2	1.1.2-2			1.1.2	bio
libace-perl (PTS, VCS, UP)	1.92-12	1.92-13	1.92-13			1.92	bio-dev
libai-fann-perl (PTS, VCS, UP)	0.10-5	0.10-5	0.10-5			0.10	bio-dev
libargs (PTS, VCS, UP)	6.4.1-1	6.4.1-1	6.4.1-1			6.4.7	bio-dev
libatomicqueue (VCS, UP)					0.0+git20200609.b6da4a9-1		bio-dev
libbigwig (PTS, VCS, UP)	0.4.7+dfsg-3.1	0.4.7+dfsg-3.1	0.4.8+dfsg-1			0.4.8	bio-dev
libbio-alignio-stockholm-perl (PTS, VCS, UP)	1.7.3-2	1.7.3-2	1.7.3-2			1.7.3	bio-dev
libbio-asn1-entrezgene-perl (PTS, VCS, UP)	1.730-3	1.730-3	1.730-3			1.73	bio-dev
libbio-chado-schema-perl (PTS, VCS, UP)	0.20000-3	0.20000-3	0.20000-3			0.20000	bio-dev
libbio-cluster-perl (PTS, VCS, UP)	1.7.3-6	1.7.3-6	1.7.3-6			1.7.3	bio-dev
libbio-coordinate-perl (PTS, VCS, UP)	1.7.1-4	1.7.1-4	1.7.1-4			1.007001	bio-dev
libbio-das-lite-perl (PTS, VCS, UP)	2.11-9	2.11-9	2.11-9			2.11	bio-dev
libbio-db-biofetch-perl (PTS, VCS, UP)	1.7.3-4	1.7.3-4	1.7.3-4			1.7.3	bio-dev
libbio-db-embl-perl (PTS, VCS, UP)	1.7.4-4	1.7.4-4	1.7.4-4			1.7.4	bio-dev
libbio-db-hts-perl (PTS, VCS, UP)	3.01-5	3.01-6	3.01-6			3.01	bio-dev
libbio-db-ncbihelper-perl (PTS, VCS, UP)	1.7.8-1	1.7.8-1	1.7.8-1			1.7.8	bio-dev
libbio-db-seqfeature-perl (PTS, VCS, UP)	1.7.5-1	1.7.5-1	1.7.5-1			1.7.5	bio-dev
libbio-eutilities-perl (PTS, VCS, UP)	1.77-3	1.77-3	1.77-3			1.77	bio-dev
libbio-featureio-perl (PTS, VCS, UP)	1.6.905-2	1.6.905-2	1.6.905-2			1.6.905	bio-dev
libbio-graphics-perl (PTS, VCS, UP)	2.40-6	2.40-6	2.40-6			2.40	bio-dev
libbio-mage-perl (PTS, VCS, UP)	20030502.3-6	20030502.3-6	20030502.3-6				bio-dev
libbio-mage-utils-perl (PTS, VCS, UP)	20030502.0-5	20030502.0-5	20030502.0-5				bio-dev
libbio-primerdesigner-perl (PTS, VCS, UP)	0.07-8	0.07-8	0.07-8			0.07	bio-dev
libbio-samtools-perl (PTS, VCS, UP)	1.43-5	1.43-5	1.43-5			1.43	bio-dev
libbio-scf-perl (PTS, VCS, UP)	1.03-7	1.03-7	1.03-7			1.03	bio-dev
libbio-tools-phylo-paml-perl (PTS, VCS, UP)	1.7.3-4	1.7.3-4	1.7.3-4			1.7.3	bio-dev
libbio-tools-run-alignment-clustalw-perl (PTS, VCS, UP)	1.7.4-4	1.7.4-4	1.7.4-4			1.7.4	bio-dev
libbio-tools-run-alignment-tcoffee-perl (PTS, VCS, UP)	1.7.4-3	1.7.4-3	1.7.4-3			1.7.4	bio-dev
libbio-tools-run-remoteblast-perl (PTS, VCS, UP)	1.7.3-3	1.7.3-3	1.7.3-3			1.7.3	bio-dev
libbio-variation-perl (PTS, VCS, UP)	1.7.5-3	1.7.5-3	1.7.5-3			1.7.5	bio-dev
libbioparser-dev (PTS, VCS, UP)	3.1.0-2	3.1.0-2	3.1.0-2			3.1.0	bio-dev
libbiosoup-dev (PTS, VCS, UP)	0.11.0-3	0.11.0-3	0.11.0-3			0.11.0	bio-dev
libbpp-core (PTS, VCS, UP)	2.4.1-13	2.4.1-14	2.4.1-14			2.4.1	bio-dev
libbpp-phyl (PTS, VCS, UP)	2.4.1-11	2.4.1-12	2.4.1-12			2.4.1	bio-dev
libbpp-phyl-omics (PTS, VCS, UP)	2.4.1-7	2.4.1-8	2.4.1-8			2.4.1	bio-dev
libbpp-popgen (PTS, VCS, UP)	2.4.1-11	2.4.1-12	2.4.1-12			2.4.1	bio-dev
libbpp-qt (PTS, VCS, UP)	2.4.1-12	2.4.1-13	2.4.1-13			2.4.1	bio-dev
libbpp-raa (PTS, VCS, UP)	2.4.1-9	2.4.1-10	2.4.1-10			2.4.1	bio-dev
libbpp-seq (PTS, VCS, UP)	2.4.1-13	2.4.1-14	2.4.1-14			2.4.1	bio-dev
libbpp-seq-omics (PTS, VCS, UP)	2.4.1-12	2.4.1-13	2.4.1-13			2.4.1	bio-dev
libchado-perl (PTS, VCS, UP)	1.31-6	1.31-6	1.31-6			1.31	bio-dev
libchipcard (PTS, VCS, UP)	5.1.6-2	5.1.6-2	5.1.6-2	5.99.1beta-2		5.99.1beta	covid-19 practice
libcifpp (PTS, VCS, UP)	7.0.9-1	7.0.9-1	7.0.9-1	9.0.1-1		9.0.4	bio-dev
libctapimkt (PTS, VCS, UP)	1.0.5~rc1-9	1.0.5~rc1-9	1.0.5~rc1-9			0.No-Track	practice
libdisorder (PTS, VCS, UP)	0.0.2+git20130809.8062ee1-4	0.0.2+git20130809.8062ee1-4	0.0.2+git20130809.8062ee1-4			0.0.2+git20130809.8062ee1	bio-dev
libdivsufsort (PTS, VCS, UP)	2.0.1-6	2.0.1-7	2.0.1-7			2.0.1	bio-dev
libedlib (PTS, VCS, UP)	1.2.7-6	1.2.7-7	1.2.7-7			1.3.9.post1	bio-dev
libfast-perl (VCS, UP)					1.7+dfsg-1		bio-dev
libfastahack (PTS, VCS, UP)	1.0.0+dfsg-11	1.0.0+dfsg-11	1.0.0+dfsg-11			1.0.0	bio bio-dev
libfreecontact-perl (PTS, VCS, UP)	0.08-10	0.08-11	0.08-11			0.No-Site	bio-dev
libgclib (PTS, VCS, UP)	0.12.7+ds-6	0.12.7+ds-6	0.12.7+ds-6			0.12.8	bio-dev covid-19
libgdf (PTS, VCS, UP)	0.1.3-11.1	0.1.3-13	0.1.3-13			0.1.3	imaging imaging-dev physics
libgenome (PTS, VCS, UP)	1.3.11+svn20110227.4616-6	1.3.11+svn20110227.4616-6	1.3.11+svn20110227.4616-6			0.No-Release	bio-dev
libgenome-model-tools-music-perl (PTS, VCS, UP)	0.04-5	0.04-5	0.04-5			0.04	bio-dev
libgenome-perl (PTS, VCS, UP)	0.06-7	0.06-7	0.06-7			0.06	bio-dev
libgff (PTS, VCS, UP)	2.0.0-3	2.0.0-3	2.0.0-3			2.0.0	bio-dev
libgkarrays (PTS, VCS, UP)	2.1.0+dfsg-4.2	2.1.0+dfsg-4.2	2.1.0+dfsg-4.2				bio-dev
libgo-perl (PTS, VCS, UP)	0.15-10	0.15-10	0.15-10			0.15	bio-dev
libgoby-java (PTS, VCS, UP)	3.3.1+dfsg2-11	3.3.1+dfsg2-12	3.3.1+dfsg2-12			3.3.1	bio-dev
libhmsbeagle (PTS, VCS, UP)	4.0.1+dfsg-3	4.0.1+dfsg-4	4.0.1+dfsg-4			4.0.1	bio-dev
libics (PTS, VCS, UP)	1.6.8-1	1.6.8-1	1.6.8-1			1.7.0	covid-19 imaging-dev
libjloda-java (PTS, VCS, UP)	2.1+ds-3	2.1+ds-3	2.1+ds-3			2.1	bio-dev
libmaus2 (PTS, VCS, UP)	2.0.813+ds-4	2.0.813+ds-5	2.0.813+ds-5				bio-dev covid-19
libmems (PTS, VCS, UP)	1.6.0+4725-11	1.6.0+4725-11	1.6.0+4725-11			0.No-Release	bio-dev
libmialm (PTS, VCS, UP)	1.0.9-4	1.0.9-4	1.0.9-4			1.0.9	imaging-dev
libminc (PTS, VCS, UP)	2.4.06-2.1	2.4.06-3	2.4.07-1			release.2.4.07	imaging-dev
libmuscle (PTS, VCS, UP)	3.7+4565-8	3.7+4565-8	3.7+4565-8			0.No-Release	bio-dev
libncl (PTS, VCS, UP)	2.1.21+git20210811.b1213a7-6	2.1.21+git20210811.b1213a7-6	2.1.21+git20210811.b1213a7-6			2.1.21+git20250926.e7d3a83	bio bio-dev
libnexml-java (VCS, UP)					0.1+dfsg-1		bio-dev
libnhgri-blastall-perl (PTS, VCS, UP)	0.66-4	0.66-4	0.66-4				bio-dev
libpal-java (PTS, VCS, UP)	1.5.1+dfsg-9	1.5.1+dfsg-9	1.5.1+dfsg-9			1.5.1	bio-dev
libpdb-redo (PTS, VCS, UP)	3.2.1-1	3.3.0-2	3.3.0-2			3.3.0	bio-dev
libpll (PTS, VCS, UP)	0.3.2-5	0.3.2-5	0.3.2-5			0.3.2	bio-dev
libpsortb (PTS, VCS, UP)	1.0+dfsg-7	1.0+dfsg-7	1.0+dfsg-7				bio-dev
libpwiz (PTS, VCS, UP)		3.0.18342-4.2	3.0.18342-4.2				bio bio-dev
libqes (PTS, VCS, UP)	0.2.8+ds-1	0.2.8+ds-2	0.2.8+ds-2			0.2.8	bio-dev
librcsb-core-wrapper (PTS, VCS, UP)	1.005-13	1.005-13	1.005-13			1.005	bio-dev
librdp-taxonomy-tree-java (PTS, VCS, UP)	1.2.0-6	1.2.0-6	1.2.0-6			1.2.0	bio-dev
librg-blast-parser-perl (PTS, VCS, UP)	0.03-9	0.03-9	0.03-9			0.No-Site	bio-dev
librg-utils-perl (PTS, VCS, UP)	1.0.43-9	1.0.43-9	1.0.43-9			0.No-Site	bio
librostlab (PTS, VCS, UP)	1.0.20-14	1.0.20-14	1.0.20-14			0.No-Site	bio-dev
librostlab-blast (PTS, VCS, UP)	1.0.1-14	1.0.1-14	1.0.1-14			0.No-Site	bio-dev
libsbml (PTS, VCS, UP)	5.20.4+dfsg-0.1		5.20.4+dfsg-0.1			5.20.5	bio-dev
libseqlib (PTS, VCS, UP)	1.2.0+dfsg-11	1.2.0+dfsg-11	1.2.0+dfsg-11			1.2.0	bio-dev
libslow5lib (PTS, VCS, UP)	0.7.0+dfsg-3	0.7.0+dfsg-3	0.7.0+dfsg-3			1.3.1	bio-dev
libsmithwaterman (PTS, VCS, UP)	0.0+git20160702.2610e25-12	0.0+git20160702.2610e25-12	0.0+git20160702.2610e25-12			0.0+git20160702.2610e25	bio bio-dev
libsort-key-top-perl (PTS, VCS, UP)	0.08-4	0.08-4	0.08-4			0.08	bio-dev
libssw (PTS, VCS, UP)	1.1-15	1.1-15	1.1-15	1.2.5-1		1.2.5	bio bio-dev
libstatgen (PTS, VCS, UP)	1.0.15-8	1.0.15-8	1.0.15-8			1.0.15	bio-dev
libtabixpp (PTS, VCS, UP)	1.1.2-2.1	1.1.2-2.1	1.1.2-2.1			1.1.2	bio-dev
libtfbs-perl (PTS, VCS, UP)	0.7.1+ds-4	0.7.1+ds-5	0.7.1+ds-5			0.7.1	bio-dev
libthread-pool (PTS, VCS, UP)	4.0.0-2	4.0.0-3	4.0.0-3			4.0.0	bio-dev
libvbz-hdf-plugin (PTS, VCS, UP)	1.0.2-3.1	1.0.2-3.1	1.0.2-3.1				bio-dev
libvcflib (PTS, VCS, UP)	1.0.12+dfsg-1	1.0.12+dfsg-1	1.0.12+dfsg-1			1.0.14	bio bio-dev bio-ngs
libvigraimpex (PTS, VCS, UP)	1.12.2+dfsg-2	1.12.2+dfsg-2	1.12.2+dfsg-2			1-12-2	imaging-dev
libvistaio (PTS, VCS, UP)	1.2.19-3	1.2.19-4	1.2.19-4			1.2.19	imaging-dev
libwfa2 (PTS, VCS, UP)	2.3.3-4	2.3.3-4	2.3.3-4			2.3.5	bio-dev
libxdf (PTS, VCS, UP)	0.99.8+dfsg-3	0.99.8+dfsg-3	0.99.8+dfsg-3			0.99.9	imaging-dev
libzerg (PTS, VCS, UP)	1.0.7-11	1.0.7-11	1.0.7-11			1.0.7	bio-dev
libzerg-perl (PTS, VCS, UP)	1.0.4-8	1.0.4-8	1.0.4-8			0.No-Site	bio-dev
lighter (PTS, VCS, UP)	1.1.3-1	1.1.3-1	1.1.3-1			1.1.3	bio covid-19
loki (PTS, VCS, UP)	2.4.7.4-12	2.4.7.4-12	2.4.7.4-12			0.No-Site	bio cloud
ltrsift (PTS, VCS, UP)	1.0.2-10	1.0.2-10	1.0.2-10			1.0.2	bio
lucy (PTS, VCS, UP)	1.20-6	1.20-6	1.20-6			1.20	bio
lumpy-sv (PTS, VCS, UP)	0.3.1+dfsg-7	0.3.1+dfsg-7	0.3.1+dfsg-7			0.3.1	bio covid-19
mach-haplotyper (VCS, UP)					1.0.18-1		bio
macromoleculebuilder (PTS, VCS, UP)	4.0.0+dfsg-5		4.0.0+dfsg-5	4.0.0+dfsg-3.1~exp1		4.2	bio bio-dev covid-19
macs (PTS, VCS, UP)	3.0.2-1	3.0.2-1	3.0.2-1			3.0.3	bio cloud
macsyfinder (PTS, VCS, UP)	2.1.4-1	2.1.4-1	2.1.4-1			2.1.5	bio
maffilter (PTS, VCS, UP)	1.3.1+dfsg-6	1.3.1+dfsg-7	1.3.1+dfsg-7			1.3.1	bio
mafft (PTS, VCS, UP)	7.505-1	7.525-1	7.525-1			7.525	bio cloud
mage2tab (VCS, UP)					0.9-1		bio
malt (PTS, VCS, UP)	0.5.2-3	0.5.2-3	0.5.2-3			0.5.2	bio
manta (VCS, UP)					1.6.0+dfsg-1		bio covid-19
mapdamage (PTS, VCS, UP)	2.2.2+dfsg-1	2.2.3+dfsg-1	2.2.3+dfsg-1			2.2.3	bio
mapsembler2 (PTS, VCS, UP)	2.2.4+dfsg1-4		2.2.4+dfsg1-5			2.2.4	bio cloud
maq (PTS, VCS, UP)	0.7.1-10	0.7.1-10	0.7.1-10			0.7.1	bio bio-ngs cloud
maqview (PTS, VCS, UP)	0.2.5-12	0.2.5-12	0.2.5-12			0.No-Site	bio
marginphase (VCS, UP)					0.0+git20181109.cdf139e-1		bio
martj (VCS, UP)					0.9+dfsg-1		bio
mash (PTS, VCS, UP)	2.3+dfsg-6	2.3+dfsg-6	2.3+dfsg-6			2.3	bio
massxpert2 (PTS, VCS, UP)	8.5.0-2		8.5.0-2				bio
maude (PTS, VCS, UP)	3.4-1	3.4-1	3.5.1-1			3.5.1	bio
mauve-aligner (PTS, VCS, UP)	2.4.0+4736-6	2.4.0+4736-6	2.4.0+4736-6			0.No-Release	bio
maxflow (PTS, VCS, UP)	3.0.5-4	3.0.5-5	3.0.5-5			3.0.5	imaging-dev
mayam (VCS, UP)					0.8-1		imaging
mcaller (PTS, VCS, UP)	1.0.3+git20210624.b415090-3	1.0.3+git20210624.b415090-3	1.0.3+git20210624.b415090-3			1.0.3+git20210624.b415090	bio
mcl (PTS, VCS, UP)	22-282+ds-4	22-282+ds-4	22-282+ds-4			22-282	bio-dev
mecat2 (PTS, VCS, UP)	0.0+git20200428.f54c542+ds-4	0.0+git20200428.f54c542+ds-4	0.0+git20200428.f54c542+ds-4			0.0+git20200428.f54c542	bio covid-19
medaka (VCS, UP)					1.0.3+dfsg-1		bio covid-19
medicalterms (PTS, VCS, UP)	20230905-2	20230905-2	20230905-2			20230905	tools
megadepth (PTS, VCS, UP)	1.2.0-4	1.2.0-4	1.2.0-5			1.2.0	bio
megahit (PTS, VCS, UP)	1.2.9-5	1.2.9-6	1.2.9-6			1.2.9	bio covid-19
megan-ce (PTS, VCS, UP)	6.21.1+dfsg-4	6.21.1+dfsg-4	6.21.1+dfsg-4			6.21.1	bio
melting (PTS, VCS, UP)	5.2.0-2	5.2.0-2	5.2.0-2			5.2.0	bio cloud
meme (VCS, UP)					5.5.5-1		bio
mencal (PTS, VCS, UP)	3.0-6	3.0-6	3.0-6			3.0	tools
mesquite (VCS, UP)					3.04+dfsg.1-1		bio
metabat (PTS, VCS, UP)	2.15-4		2.18-1			2.18	bio covid-19
metabit (VCS, UP)					0.0+git20170725.24cb3ee+dfsg-1		bio
metaeuk (PTS, VCS, UP)	7-bba0d80+ds-1	7-bba0d80+ds-2	7-bba0d80+ds-2			7-bba0d80	bio
metaphlan (PTS, VCS, UP)	4.0.4+ds-1	4.0.4+ds-1	4.0.4+ds-1			4.2.4	bio
metastudent (PTS, VCS, UP)	2.0.1-10	2.0.1-10	2.0.1-10			0.No-Site	bio
metastudent-data (PTS, VCS, UP)	2.0.1-8	2.0.1-8	2.0.1-8			0.No-Site	bio
metastudent-data-2 (PTS, VCS, UP)	1.0.0-6	1.0.0-6	1.0.0-6			0.No-Site	bio
mhap (PTS, VCS, UP)	2.1.3+dfsg-3	2.1.3+dfsg-3	2.1.3+dfsg-3			2.1.3	bio bio-ngs
mia (PTS, VCS, UP)			2.4.7-16			2.4.7	imaging imaging-dev
microbegps (PTS, VCS, UP)	1.0.0-7	1.0.0-7	1.0.0-7			1.0.0	bio
microbiomeutil (PTS, VCS, UP)	20101212+dfsg1-6	20101212+dfsg1-6	20101212+dfsg1-6			20101212	bio
micromanager (VCS, UP)					1.4.10-1		imaging
milib (PTS, VCS, UP)	2.2.0+dfsg-1	2.2.0+dfsg-1	2.2.0+dfsg-1				bio-dev covid-19
minc-tools (PTS, VCS, UP)	2.3.00+dfsg-12	2.3.00+dfsg-14	2.3.00+dfsg-14			2-3-00	imaging
mindthegap (PTS, VCS, UP)			2.3.0-5			2.3.0	bio
minexpert2 (PTS, VCS, UP)	9.6.0-1		9.6.0-1				bio
minia (PTS, VCS, UP)	3.2.6-4	3.2.6-5	3.2.6-5			3.2.6	bio cloud covid-19
miniasm (PTS, VCS, UP)	0.3+dfsg-4	0.3+dfsg-4	0.3+dfsg-4			0.3	bio
minimac4 (PTS, VCS, UP)	4.1.6-1	4.1.6-1	4.1.6-1			4.1.6	bio
minimap (PTS, VCS, UP)	0.2-8	0.2-8	0.2-8			0.2	bio bio-dev
minimap2 (PTS, VCS, UP)	2.27+dfsg-1	2.27+dfsg-1	2.27+dfsg-1			2.30	bio bio-dev covid-19
mipav (VCS, UP)					5.0.0.20100907-2		imaging
mipe (PTS, VCS, UP)	1.1-9	1.1-9	1.1-9			1.1	bio cloud
mira (PTS, VCS, UP)	4.9.6-11	4.9.6-11	4.9.6-11			4.9.6	bio cloud
mirtop (PTS, VCS, UP)	0.4.30-1	0.4.30-1	0.4.30-1			0.4.30	bio bio-dev
mlv-smile (PTS, VCS, UP)	1.47-10	1.47-10	1.47-10			1.47	bio cloud
mmseqs2 (PTS, VCS, UP)	15-6f452+ds-2	18-8cc5c+ds-1	18-8cc5c+ds-1			18-8cc5c	bio covid-19
mmtf-python (PTS, VCS, UP)	1.1.3-1	1.1.3-1	1.1.3-1				covid-19
mni-colin27 (VCS, UP)					1.1-2		imaging
modeller (VCS, UP)					9.19-1		bio
molekel (VCS, UP)					5.4-1		bio
mosaik-aligner (VCS, UP)					2.2.30+20140627-1		bio
mosdepth (PTS, VCS, UP)		0.3.11+ds-3	0.3.11+ds-3			0.3.11	bio
mothur (PTS, VCS, UP)	1.48.1-1	1.48.1-1	1.48.1-1			1.48.3	bio cloud
mpsqed (VCS, UP)					0.9.3-1		bio
mptp (PTS, VCS, UP)	0.2.5-1	0.2.5-2	0.2.5-2			0.2.5	bio
mrbayes (PTS, VCS, UP)	3.2.7a-7	3.2.7a-7	3.2.7a-7			3.2.7a	bio bio-phylogeny cloud
mricron (PTS, VCS, UP)	1.2.20211006+dfsg-6	1.2.20211006+dfsg-6	1.2.20211006+dfsg-6			1.2.20211006	imaging
mrs (VCS, UP)					6.0.5+dfsg-8		bio
mrtrix3 (PTS, VCS, UP)	3.0.4-1	3.0.4-1	3.0.4-1			3.0.8	imaging
mssstest (PTS, VCS, UP)	3.0-7	3.0-7	3.0-7			0.No-Release	tools
mugsy (VCS, UP)					1r2.3+dfsg-1		bio
multiqc (PTS, VCS, UP)	1.21+dfsg-2	1.21+dfsg-2	1.21+dfsg-2			1.31	bio covid-19
mummer (PTS, VCS, UP)	3.23+dfsg-8	3.23+dfsg-8	3.23+dfsg-8			4.0.0.beta5	bio cloud
murasaki (PTS, VCS, UP)	1.68.6-14	1.68.6-15	1.68.6-15			1.68.6	bio
muscle (PTS, VCS, UP)	5.1.0-1	5.1.0-1	5.1.0-1			5.3	bio bio-phylogeny cloud covid-19
muscle3 (PTS, VCS, UP)	3.8.1551-3	3.8.1551-3	3.8.1551-3			3.8.1551	bio bio-phylogeny cloud covid-19
mustang (PTS, VCS, UP)	3.2.4-1	3.2.4-1	3.2.4-1			3.2.4	bio bio-phylogeny cloud
mview (VCS, UP)					1.67+dfsg1-1		bio
nano-snakemake (VCS, UP)					1.0+git20200224.ff11b35-1		bio
nanocall (VCS, UP)					0.7.4-1		bio
nanocomp (VCS, UP)					1.12.0-1		bio
nanofilt (PTS, VCS, UP)	2.8.0-1	2.8.0-1	2.8.0-1			2.8.0	bio covid-19
nanolyse (PTS, VCS, UP)	1.2.0-4	1.2.0-4	1.2.0-4			1.2.0	bio covid-19
nanook (PTS, VCS, UP)			1.33+dfsg-6			1.33	bio covid-19
nanoplot (VCS, UP)					1.36.2-1		bio covid-19
nanopolish (PTS, VCS, UP)	0.14.0-1	0.14.0-2	0.14.0-2			0.14.0	bio covid-19
nanostat (PTS, VCS, UP)			1.4.0-4			1.4.0	bio
nanosv (PTS, VCS, UP)	1.2.4+git20190409.c1ae30c-7	1.2.4+git20190409.c1ae30c-7	1.2.4+git20190409.c1ae30c-7			1.2.4+git20190409.c1ae30c	bio covid-19
ncbi-acc-download (PTS, VCS, UP)	0.2.8-3	0.2.8-3	0.2.8-3			0.2.9	bio
ncbi-blast+ (PTS, VCS, UP)	2.16.0+ds-7	2.17.0+ds-6	2.17.0+ds-6			2.17.0	bio cloud covid-19
ncbi-entrez-direct (PTS, VCS, UP)	24.0.20250523+dfsg-1	24.0.20250523+dfsg-2	24.0.20250523+dfsg-2			24.7.20250910	bio
ncbi-igblast (PTS, VCS, UP)	1.20.0-2	1.20.0-3	1.20.0-3			1.22.0	bio
ncbi-magicblast (VCS, UP)					1.5.0+ds-1		bio covid-19
ncbi-seg (PTS, VCS, UP)	0.0.20000620-7	0.0.20000620-8	0.0.20000620-8				bio
ncbi-tools6 (PTS, VCS, UP)	6.1.20170106+dfsg2-6	6.1.20170106+dfsg2-6	6.1.20170106+dfsg2-6			20170106	bio bio-dev cloud
ncbi-vdb (PTS, VCS, UP)	3.2.1+dfsg-2	3.2.1+dfsg-2	3.2.1+dfsg-2			3.2.1	bio-dev
neobio (PTS, VCS, UP)	0.0.20030929-6	0.0.20030929-6	0.0.20030929-6			0.No-Release	bio cloud
netepi-analysis (VCS, UP)					0.9.0-2		epi
netepi-collection (VCS, UP)					1.8.4-2		epi
networkx (PTS, VCS, UP)	3.2.1-5	3.4.2-2	3.4.2-2			3.5	bio-dev
nextflow (VCS, UP)					23.10.1+dfsg-1		covid-19
nextstrain-ncov (VCS, UP)					0.0+git20200320.392dc1c-1		covid-19
nextsv (VCS, UP)					0.4.0-1		bio
nf-core-artic (VCS, UP)					0.0+git20200324.9edd884-1		covid-19
ngila (VCS, UP)					1.3-1		bio
ngmlr (PTS, VCS, UP)	0.2.7+git20210816.a2a31fb+dfsg-2	0.2.7+git20210816.a2a31fb+dfsg-3	0.2.7+git20210816.a2a31fb+dfsg-3	0.2.7+git20210816.a2a31fb+dfsg-4~0exp0simde		0.2.7+git20210816.a2a31fb	bio covid-19
ngsqctoolkit (VCS, UP)					2.3.3-1		bio
nibabel (PTS, VCS, UP)	5.3.2-2	5.3.2-3	5.3.2-3			5.3.2	imaging imaging-dev
nifticlib (PTS, VCS, UP)	3.0.1-9.1	3.0.1-9.1	3.0.1-9.1			3.0.1	imaging imaging-dev
nim-hts (PTS, VCS, UP)		0.3.25+ds-3	0.3.25+ds-3			0.3.26	bio-dev
nim-kexpr (PTS, VCS, UP)		0.0.2-3	0.0.2-3			0.0.2	bio-dev
nim-lapper (PTS, VCS, UP)		0.1.8-1	0.1.8-1			0.1.8	bio-dev
nipy (PTS, VCS, UP)	0.6.1-1	0.6.1-3	0.6.1-3			0.6.1	imaging imaging-dev
nipype (PTS, VCS, UP)	1.9.2-2		1.9.2-4			1.10.0	imaging imaging-dev
nitime (PTS, VCS, UP)	0.11-3	0.11-3	0.11-3			0.11	imaging imaging-dev
njplot (PTS, VCS, UP)	2.4-9	2.4-9	2.4-9				bio bio-phylogeny
node-shiny-server (PTS, VCS, UP)	1.5.20.1002-4	1.5.20.1002-4	1.5.20.1002-4			1.5.23.1030	covid-19 epi
norsnet (PTS, VCS, UP)	1.0.17-7	1.0.17-7	1.0.17-7			0.No-Site	bio
norsp (PTS, VCS, UP)	1.0.6-7	1.0.6-7	1.0.6-7			0.No-Site	bio
ntcard (PTS, VCS, UP)	1.2.2+dfsg-9	1.2.2+dfsg-10	1.2.2+dfsg-10			1.2.2	bio
nthash (PTS, VCS, UP)	2.3.0+dfsg-4	2.3.0+dfsg-4	2.3.0+dfsg-4			2.3.0	covid-19
nutsqlite (PTS, VCS, UP)	2.0.6-4	2.0.6-4	2.0.6-4			2.0.6	tools
nw-align (VCS, UP)					0.20100803-1		bio
nxtrim (PTS, VCS, UP)	0.4.3+dfsg-4	0.4.3+dfsg-4	0.4.3+dfsg-4			0.4.3	bio
oases (VCS, UP)					0.2.09-1		bio
obitools (PTS, VCS, UP)	3.0.1~b26+dfsg-4	3.0.1~b26+dfsg-4	3.0.1~b26+dfsg-4			3.0.1b26	bio
octave (PTS, VCS, UP)	9.4.0-1	10.3.0-2	10.3.0-2			10.3.0	physics
octave-dicom (PTS, VCS, UP)	0.6.1-1	0.6.1-2	0.6.1-2			0.6.1	imaging-dev
odil (PTS, VCS, UP)	0.12.2-5	0.13.0-1	0.13.0-1			0.13.0	covid-19 imaging imaging-dev
odin (PTS, VCS, UP)	2.0.5-7	2.0.5-8	2.0.5-8			2.0.5	imaging imaging-dev
omegamap (VCS, UP)					0.5-1		bio
oncofuse (VCS, UP)					1.1.1-1		bio covid-19
ont-fast5-api (PTS, VCS, UP)	4.1.3+dfsg-1	4.1.3+dfsg-1	4.1.3+dfsg-1			4.1.3	bio-dev
opencfu (PTS, VCS, UP)	4.0.0+dfsg-2	4.0.0+dfsg-2	4.0.0+dfsg-2			4.0.0	laboratory
opencv (PTS, VCS, UP)	4.10.0+dfsg-5	4.10.0+dfsg-6	4.10.0+dfsg-6			4.12.0	imaging-dev
openelectrophy (VCS, UP)					0.0.svn143		imaging
openemr (VCS, UP)					4.2.2+dfsg-1		practice
openfreezer (VCS, UP)					20131306-1		laboratory
openigtlink (PTS, VCS, UP)	1.11.0-6	3.0.0-3	3.0.0-3			3.0	imaging-dev
openmeeg (VCS, UP)					2.4.2-1		imaging imaging-dev
openmm (PTS, VCS, UP)	8.1.2+dfsg-11	8.1.2+dfsg-12	8.1.2+dfsg-12			8.3.1	bio-dev
openmrs (VCS, UP)					2.5-1		his
openms (PTS, VCS, UP)	2.6.0+cleaned1-4	2.6.0+cleaned1-4	2.6.0+cleaned1-4			2.4.0-src	bio bio-dev
openslide (PTS, VCS, UP)	3.4.1+dfsg-7	3.4.1+dfsg-7	3.4.1+dfsg-7			4.0.0	imaging imaging-dev
openslide-java (VCS, UP)					0.12.2-1		imaging-dev
openslide-python (PTS, VCS, UP)	1.4.1-1	1.4.1-1	1.4.1-1			1.4.2	imaging-dev
openwalnut (VCS, UP)							imaging
optimir (PTS, VCS, UP)	1.2-2	1.2-2	1.2-2			1.2	bio
optitype (VCS, UP)					1.3.2-1		bio covid-19
orthanc (PTS, VCS, UP)	1.12.7+dfsg-4	1.12.9+dfsg-2	1.12.9+dfsg-2			1.12.9	covid-19 imaging practice
orthanc-dicomweb (PTS, VCS, UP)	1.20+dfsg-1	1.21+dfsg-1	1.21+dfsg-1			1.21	covid-19 imaging
orthanc-gdcm (PTS, VCS, UP)	1.8+dfsg-1	1.8+dfsg-2	1.8+dfsg-2			1.8	imaging
orthanc-imagej (PTS, VCS, UP)	1.2+dfsg-4	1.2+dfsg-6	1.2+dfsg-6			1.2	imaging
orthanc-mysql (PTS, VCS, UP)	5.0+dfsg-1	5.0+dfsg-3	5.0+dfsg-3			5.2	imaging
orthanc-neuro (PTS, VCS, UP)	1.1+dfsg-1	1.1+dfsg-2	1.1+dfsg-2			1.1	imaging psychology
orthanc-postgresql (PTS, VCS, UP)	5.0+dfsg-3	5.0+dfsg-5	5.0+dfsg-5			9.0	imaging
orthanc-python (PTS, VCS, UP)	5.0+ds-3	6.0+ds-2	6.0+ds-2			6.0	covid-19
orthanc-webviewer (PTS, VCS, UP)	2.10+dfsg-1	2.10+dfsg-2	2.10+dfsg-2			2.10	imaging
orthanc-wsi (PTS, VCS, UP)	3.2+dfsg-7	3.2+dfsg-7	3.2+dfsg-7			3.2	covid-19 his imaging laboratory oncology practice
oscar (PTS, VCS, UP)	1.5.3-2	1.5.3-2	1.5.3-2			1.5.3	data practice tools
paipline (VCS, UP)					0.0+git20180416.062bce7-1		bio
pairtools (PTS, VCS, UP)	1.1.3-1	1.1.3-2	1.1.3-2			1.1.3	bio covid-19
pal2nal (PTS, VCS, UP)	14.1-3	14.1-3	14.1-3			14.1	bio
paleomix (PTS, VCS, UP)	1.3.8-2	1.3.8-2	1.3.8-2			1.3.10	bio covid-19
paml (PTS, VCS, UP)	4.9j+dfsg-6	4.9j+dfsg-6	4.9j+dfsg-6				bio
pangolin (VCS, UP)					4.3.1-1		bio covid-19
papyrus (PTS, VCS, UP)	3.7.1+dfsg-6	3.7.1+dfsg-6	3.7.1+dfsg-6			0.No-Site	imaging-dev
paraclu (PTS, VCS, UP)	10-1	10-1	10-1				bio cloud
parallel-fastq-dump (PTS, VCS, UP)	0.6.7-3	0.6.7-3	0.6.7-3			0.6.7	covid-19
parasail (PTS, VCS, UP)	2.6.2+dfsg-2	2.6.2+dfsg-2	2.6.2+dfsg-2			2.6.2	bio bio-dev covid-19
paraview (PTS, VCS, UP)	5.13.2+dfsg-3		5.13.2+dfsg-3			6.0.1	imaging
parsinsert (PTS, VCS, UP)	1.04-15	1.04-15	1.04-15			1.04	bio cloud
parsnp (PTS, VCS, UP)	2.1.3+dfsg-1	2.1.3+dfsg-1	2.1.3+dfsg-1			2.1.5	bio
partitionfinder (VCS, UP)					2.1.1+dfsg-1		bio
patman (PTS, VCS, UP)	1.2.2+dfsg-8	1.2.2+dfsg-8	1.2.2+dfsg-8			0.No-Track	bio
patristic (VCS, UP)					0.0.20100817-2		bio bio-phylogeny
pbbam (PTS, VCS, UP)	2.4.0+dfsg-1	2.4.0+dfsg-2	2.4.0+dfsg-2			2.4.0	bio-dev
pbcopper (PTS, VCS, UP)	2.3.0+dfsg-2	2.3.0+dfsg-4	2.3.0+dfsg-4			2.3.0	bio-dev
pbdagcon (PTS, VCS, UP)	0.3+git20180411.c14c422+dfsg-9	0.3+git20180411.c14c422+dfsg-9	0.3+git20180411.c14c422+dfsg-9				bio
pbseqlib (PTS, VCS, UP)	5.3.5+dfsg-10	5.3.5+dfsg-11	5.3.5+dfsg-11				bio-dev
pbsim (PTS, VCS, UP)	1.0.3+git20180330.e014b1d+dfsg-3	1.0.3+git20180330.e014b1d+dfsg-3	1.0.3+git20180330.e014b1d+dfsg-3			1.0.3+git20180330.e014b1d	bio
pbsuite (PTS, VCS, UP)			15.8.24+dfsg-8			15.8.24	bio
pcalendar (PTS, VCS, UP)	3.4.1-6	3.4.1-6	3.4.1-6			3.4.1	tools
pcma (VCS, UP)					2.0+20040626-1		bio
pdb2pqr (PTS, VCS, UP)	3.6.1+dfsg-1	3.6.1+dfsg-2	3.6.1+dfsg-2			3.7.1	bio cloud
peptidebuilder (PTS, VCS, UP)	1.1.0-3	1.1.0-3	1.1.0-3			1.1.0	bio-dev
perlprimer (PTS, VCS, UP)	1.2.4-2	1.2.4-2	1.2.4-2			1.1.21	bio
perm (PTS, VCS, UP)	0.4.0-8	0.4.0-8	0.4.0-8			0.No-Site	bio cloud
pesco (VCS, UP)					1.2-1		tools
pftools (PTS, VCS, UP)	3.2.12-1	3.2.12-2	3.2.12-2			3.2.13	bio
phast (PTS, VCS, UP)	1.7+dfsg-2	1.7+dfsg-3	1.7+dfsg-3			1.8	bio
phipack (PTS, VCS, UP)	0.0.20160614-5	0.0.20160614-5	0.0.20160614-5			0.No-Site	bio
phybin (PTS, VCS, UP)	0.3-6	0.3-7	0.3-7			0.3	bio
phylip (PTS, VCS, UP)	3.697+dfsg-4	3.697+dfsg-4	3.697+dfsg-4			3.698	bio bio-phylogeny
phylonium (PTS, VCS, UP)	1.7-3	1.7-3	1.7-3			1.7	bio
phylophlan (VCS, UP)					1.1.0-1		bio
phyloviz-core (VCS, UP)					0.0.20111121-1		bio
phyml (PTS, VCS, UP)	3.3.20220408-4	3.3.20220408-4	3.3.20220408-4			3.3.20250515	bio bio-phylogeny cloud
physamp (PTS, VCS, UP)	1.1.0-5	1.1.0-6	1.1.0-6			1.1.0	bio
phyutility (PTS, VCS, UP)	2.7.3+dfsg-4	2.7.3+dfsg-4	2.7.3+dfsg-4			2.7.3	bio cloud
phyx (PTS, VCS, UP)	1.3.2+ds-1	1.3.2+ds-1	1.3.2+ds-1			1.3.2	bio
picard-tools (PTS, VCS, UP)	3.3.0+dfsg-2	3.3.0+dfsg-2	3.3.0+dfsg-2			3.4.0	bio bio-ngs cloud covid-19
picopore (PTS, VCS, UP)	1.2.0-3	1.2.0-3	1.2.0-3			1.2.0	bio covid-19
pigx-rnaseq (PTS, VCS, UP)	0.1.1-1		0.1.1-1			0.1.1	bio covid-19
pigx-scrnaseq (VCS, UP)					1.1.7+ds-1		bio
piler (PTS, VCS, UP)	0~20140707-4	0~20140707-4	0~20140707-4			0.No-Release	bio
pilercr (PTS, VCS, UP)	1.06+dfsg-5	1.06+dfsg-5	1.06+dfsg-5			1.06	bio
pilon (PTS, VCS, UP)	1.24-4	1.24-4	1.24-4			1.24	bio
pinfish (PTS, VCS, UP)	0.1.0+ds-4	0.1.0+ds-4	0.1.0+ds-4			0.1.0	bio covid-19
pipasic (VCS, UP)					0.0.r15-1		bio
pique (PTS, VCS, UP)	1.1-1	1.1-1	1.1-1			1.1	bio
pirs (PTS, VCS, UP)	2.0.2+dfsg-12	2.0.2+dfsg-12	2.0.2+dfsg-12			2.0.2	bio
pixelmed (PTS, VCS, UP)	20250211+dfsg-2	20250211+dfsg-2	20250211+dfsg-2				imaging
pizzly (PTS, VCS, UP)	0.37.3+ds-9	0.37.3+ds-11	0.37.3+ds-11			0.37.3	bio
placnet (PTS, VCS, UP)	1.04-1	1.04-1	1.04-1			0.No-Track	bio
plasmidid (PTS, VCS, UP)	1.6.5+dfsg-2	1.6.5+dfsg-2	1.6.5+dfsg-2			1.6.5	bio covid-19
plasmidomics (PTS, VCS, UP)	0.2.0-10	0.2.0-10	0.2.0-10			0.No-Track	bio
plasmidseeker (PTS, VCS, UP)	1.3+dfsg-3	1.3+dfsg-3	1.3+dfsg-3			1.3	bio
plast (PTS, VCS, UP)	2.3.2+dfsg-10	2.3.2+dfsg-12	2.3.2+dfsg-12			2.3.2	bio
plastimatch (PTS, VCS, UP)	1.10.0+dfsg.1-1	1.10.0+dfsg.1-1	1.10.0+dfsg.1-1			1.10.0	imaging
plato (VCS, UP)					2.0.0-1		bio
plink (PTS, VCS, UP)	1.07+dfsg-4	1.07+dfsg-4	1.07+dfsg-4			1.07	bio cloud
plink1.9 (PTS, VCS, UP)	1.90~b7.7-241022-2	1.90~b7.7-241022-2	1.90~b7.7-241022-2			0.No-Track	bio cloud covid-19
plink2 (PTS, VCS, UP)	2.00~a6.9-250129+dfsg-1	2.00~a6.9-250129+dfsg-1	2.00~a6.9-250129+dfsg-1			251019	bio cloud covid-19
plip (PTS, VCS, UP)	2.4.0+dfsg-4	2.4.0+dfsg-4	2.4.0+dfsg-4			2.4.0	bio covid-19
pngquant (PTS, VCS, UP)	2.18.0-1	2.18.0-1	2.18.0-1			2.18.0	imaging
poa (PTS, VCS, UP)	2.0+20060928-10	2.0+20060928-10	2.0+20060928-10			2	bio bio-phylogeny cloud
pomoxis (VCS, UP)					0.3.4-1		bio covid-19
populations (PTS, VCS, UP)	1.2.33+svn0120106+dfsg-7	1.2.33+svn0120106+dfsg-8	1.2.33+svn0120106+dfsg-8			1.2.33	bio bio-phylogeny
porechop (PTS, VCS, UP)	0.2.4+dfsg-6	0.2.4+dfsg-6	0.2.4+dfsg-6	0.2.4+dfsg-8		0.2.4	bio covid-19
poretools (PTS, VCS, UP)	0.6.0+dfsg-7	0.6.0+dfsg-7	0.6.0+dfsg-7			0.6.0	bio covid-19
pplacer (PTS, VCS, UP)			1.1~alpha19-8			1.1.alpha20	bio bio-phylogeny covid-19
praat (PTS, VCS, UP)	6.4.27+dfsg-2	6.4.46+dfsg-1	6.4.46+dfsg-1			6.4.46	psychology
prank (PTS, VCS, UP)	0.0.170427+dfsg-3	250331-1	250331-1			170427	bio cloud
predictnls (PTS, VCS, UP)	1.0.20-8	1.0.20-8	1.0.20-8			0.No-Site	bio
presto (PTS, VCS, UP)	0.7.2-2	0.7.5-1	0.7.5-1			0.7.6	bio bio-dev covid-19
prime-phylo (PTS, VCS, UP)	1.0.11-13	1.0.11-14	1.0.11-14				bio cloud
primer3 (PTS, VCS, UP)	2.6.1-5	2.6.1-6	2.6.1-6			2.6.1	bio cloud
prinseq-lite (PTS, VCS, UP)	0.20.4-6	0.20.4-6	0.20.4-6			0.20.4	bio covid-19
proalign (PTS, VCS, UP)	0.603-6	0.603-6	0.603-6			0.No-Release	bio bio-phylogeny
probabel (PTS, VCS, UP)	0.5.0+dfsg-6	0.5.0+dfsg-6	0.5.0+dfsg-6			0.5.0	bio cloud
probalign (PTS, VCS, UP)	1.4-10	1.4-10	1.4-10			1.4	bio bio-phylogeny
probcons (PTS, VCS, UP)	1.12-14	1.12-15	1.12-15			1.12	bio bio-phylogeny cloud
proda (PTS, VCS, UP)	1.0-14	1.0-14	1.0-14			1_0	bio bio-phylogeny cloud
prodigal (PTS, VCS, UP)	2.6.3-6	2.6.3-6	2.6.3-6			2.6.3	bio cloud
profbval (PTS, VCS, UP)	1.0.22-8	1.0.22-8	1.0.22-8			0.No-Site	bio
profisis (PTS, VCS, UP)	1.0.11-7	1.0.11-7	1.0.11-7			0.No-Site	bio
profit (VCS, UP)					3.1-1		bio
profnet (PTS, VCS, UP)	1.0.22-8	1.0.22-8	1.0.22-8			0.No-Site	bio
profphd (VCS, UP)					1.0.42-4		bio
profphd-utils (PTS, VCS, UP)	1.0.10-7	1.0.10-7	1.0.10-7			0.No-Site	bio
proftmb (PTS, VCS, UP)	1.1.12-11	1.1.12-11	1.1.12-11			0.No-Site	bio
progressivemauve (PTS, VCS, UP)	1.2.0+4713+dfsg-5	1.2.0+4713+dfsg-5	1.2.0+4713+dfsg-5			0.No-Release	bio
prokka (PTS, VCS, UP)	1.14.6+dfsg-6	1.14.6+dfsg-6	1.14.6+dfsg-6			1.14.6	bio covid-19
propka (PTS, VCS, UP)	3.5.1-2	3.5.1-2	3.5.1-2			3.5.1	bio-dev
proteinortho (PTS, VCS, UP)	6.3.1+dfsg-1	6.3.1+dfsg-1	6.3.1+dfsg-1				bio covid-19
prottest (PTS, VCS, UP)	3.4.2+dfsg-8	3.4.2+dfsg-8	3.4.2+dfsg-8			3.4.2	bio bio-phylogeny
provean (PTS, VCS, UP)	1.1.5+ds-5	1.1.5+ds-5	1.1.5+ds-5			1.1.5	bio
pscan-chip (PTS, VCS, UP)	1.1-3	1.1-3	1.1-3			0.No-Release	bio
pscan-tfbs (PTS, VCS, UP)	1.2.2-4	1.2.2-4	1.2.2-4			0.No-Release	bio
psignifit (PTS, VCS, UP)	2.5.6-8	2.5.6-8	2.5.6-8			2-5-6	psychology
psipred (VCS, UP)					4.01-1		bio
psortb (PTS, VCS, UP)	3.0.6+dfsg-4	3.0.6+dfsg-4	3.0.6+dfsg-4				bio
pssh2 (VCS, UP)					0.6		bio
psychopy (PTS, VCS, UP)			2023.2.4+dfsg-4			2025.2.1	psychology
pufferfish (VCS, UP)					1.8.0+dfsg-1		bio
pullseq (PTS, VCS, UP)	1.0.2-5	1.0.2-5	1.0.2-5				bio
purple (VCS, UP)					0.4.1-1		bio
pybel (PTS, VCS, UP)	0.15.5-1	0.15.5-2	0.15.5-2			0.15.5	bio bio-dev
pybigwig (PTS, VCS, UP)	0.3.23+dfsg-1	0.3.23+dfsg-1	0.3.23+dfsg-1			0.3.24	bio-dev
pychopper (PTS, VCS, UP)			2.7.10-1			2.7.10	bio covid-19
pycoqc (PTS, VCS, UP)	2.5.2+dfsg-4	2.5.2+dfsg-4	2.5.2+dfsg-4			2.5.2	bio covid-19
pycorrfit (PTS, VCS, UP)	1.1.7+nopack-3	1.1.7+nopack-3	1.1.7+nopack-3			1.2.1	bio
pydicom (PTS, VCS, UP)	2.4.3-2	2.4.3-2	2.4.3-2			3.0.1	covid-19 imaging imaging-dev
pyensembl (PTS, VCS, UP)	2.3.13-2	2.3.13-2	2.3.13-3			2.3.13	bio
pyfai (PTS, VCS, UP)	2025.03-1	2025.03-1	2025.03-1			2025.03	bio-dev
pyfastx (PTS, VCS, UP)	2.2.0-1	2.2.0-1	2.2.0-1			2.2.0	bio bio-dev
pymia (PTS, VCS, UP)			0.1.9-3			0.1.9	imaging-dev
pymol (PTS, VCS, UP)	3.1.0+dfsg-1	3.1.0+dfsg-1	3.1.0+dfsg-1			3.1.0	bio
pynn (PTS, VCS, UP)	0.10.1-5	0.10.1-5	0.10.1-5			0.12.4	covid-19
pynwb (PTS, VCS, UP)	2.8.2-2	2.8.2-2	2.8.2-2			3.1.2	psychology
pyranges (PTS, VCS, UP)	0.0.111+ds-9	0.0.111+ds-9	0.0.111+ds-9			0.0.111	bio bio-dev
pyrle (PTS, VCS, UP)	0.0.33-4.1	0.0.33-4.1	0.0.33-4.1				bio
pyscanfcs (PTS, VCS, UP)	0.3.6+ds-5	0.3.6+ds-5	0.3.6+ds-5			0.3.6	bio
pysurfer (PTS, VCS, UP)			0.11.2-1			0.11.2	imaging
python-airr (PTS, VCS, UP)	1.5.1-1	1.5.1-1	1.5.1-1			1.5.1	bio-dev
python-alignlib (PTS, VCS, UP)	0.1.1+dfsg-2	0.1.1+dfsg-2	0.1.1+dfsg-2			0.1.1	bio bio-dev
python-anndata (PTS, VCS, UP)			0.12.0~rc1-1			0.12.3	bio bio-dev bio-ngs covid-19
python-bcbio-gff (PTS, VCS, UP)	0.7.1-2	0.7.1-2	0.7.1-2			0.7.1	bio-dev
python-bel-resources (PTS, VCS, UP)	0.0.3-4	0.0.3-4	0.0.3-4			0.0.3	bio-dev
python-bids-validator (PTS, VCS, UP)	1.14.6-1	1.14.6-1	1.14.6-1			1.14.6	psychology
python-bioblend (PTS, VCS, UP)	1.2.0-2	1.2.0-2	1.2.0-2			1.6.0	bio-dev
python-bioframe (PTS, VCS, UP)	0.4.1-2	0.4.1-2	0.4.1-2			0.8.0	bio-dev
python-biom-format (PTS, VCS, UP)	2.1.16-1	2.1.16-1	2.1.16-1			2.1.17	bio-dev covid-19
python-biopython (PTS, VCS, UP)	1.85+dfsg-4	1.85+dfsg-5	1.85+dfsg-5			185	bio-dev cloud covid-19
python-biotools (PTS, VCS, UP)	1.2.12-6	1.2.12-6	1.2.12-6			1.2.12	bio-dev
python-bx (PTS, VCS, UP)	0.13.0-1	0.13.0-2	0.13.0-2			0.14.0	bio-dev covid-19
python-cgecore (PTS, VCS, UP)	1.5.6+ds-2	1.5.6+ds-2	1.5.6+ds-2			2.0.1	bio bio-dev covid-19
python-cgelib (PTS, VCS, UP)	0.7.3-3	0.7.3-3	0.7.3-3			0.7.5	bio-dev
python-cigar (PTS, VCS, UP)	0.1.3-2	0.1.3-2	0.1.3-2			0.1.3	bio-dev
python-cobra (PTS, VCS, UP)			0.29.1-3			0.30.0	bio-dev
python-cogent (PTS, VCS, UP)			2024.5.7a1+dfsg-3			2025.9.8a5	bio bio-dev cloud covid-19
python-cooler (PTS, VCS, UP)	0.10.3-1	0.10.3-1	0.10.3-1			0.10.4	bio-dev covid-19
python-csb (PTS, VCS, UP)	1.2.5+dfsg-10	1.2.5+dfsg-10	1.2.5+dfsg-10			1.2.5	bio bio-dev
python-cutadapt (PTS, VCS, UP)	4.7-2	4.7-2	4.7-2			5.2	bio bio-dev covid-19
python-deeptools (PTS, VCS, UP)	3.5.6+dfsg-1	3.5.6+dfsg-1	3.5.6+dfsg-1			3.5.6	bio bio-dev
python-deeptoolsintervals (PTS, VCS, UP)	0.1.9-3	0.1.9-3	0.1.9-3			0.1.9	bio bio-dev
python-dendropy (PTS, VCS, UP)	4.6.1-2	4.6.1-2	4.6.1-2			5.0.8	bio bio-dev
python-depinfo (PTS, VCS, UP)	2.2.0-3	2.2.0-4	2.2.0-4			2.2.0rc3	covid-19
python-dicompylercore (PTS, VCS, UP)	0.5.6-3	0.5.6-3	0.5.6-3			0.5.6	oncology
python-dnaio (PTS, VCS, UP)	1.2.3-1	1.2.3-2	1.2.3-2			1.2.4	bio-dev
python-epimodels (PTS, VCS, UP)	0.4.0-4	0.4.0-4	0.4.0-4			0.5.2	epi
python-ete3 (PTS, VCS, UP)	3.1.3+dfsg-3	3.1.3+dfsg-3	3.1.3+dfsg-3			3.1.3	bio-dev
python-etelemetry (PTS, VCS, UP)	0.3.1-1		0.3.1-1			0.3.1	covid-19
python-fitbit (PTS, VCS, UP)	0.3.1-5	0.3.1-5	0.3.1-5			0.3.1	tools
python-freecontact (PTS, VCS, UP)	1.1-9	1.1-10	1.1-10			0.No-Site	bio-dev
python-geneimpacts (PTS, VCS, UP)	0.3.7-5	0.3.7-5	0.3.7-5			0.3.7	bio
python-gffutils (PTS, VCS, UP)	0.13-2	0.13-3	0.13-3			0.13	bio bio-dev covid-19
python-gtfparse (PTS, VCS, UP)	1.3.0+ds-2	1.3.0+ds-2	1.3.0+ds-2			2.5.0	bio-dev
python-hl7 (PTS, VCS, UP)	0.4.5-3	0.4.5-3	0.4.5-3			0.4.5	data
python-imageio (PTS, VCS, UP)	2.37.0-1	2.37.1-1	2.37.1-1			2.37.1	imaging-dev
python-intervaltree-bio (PTS, VCS, UP)	1.0.1-4	1.0.1-4	1.0.1-4			1.0.1	bio-dev
python-loompy (PTS, VCS, UP)	3.0.7+dfsg-4	3.0.7+dfsg-4	3.0.7+dfsg-4			3.0.8	bio bio-dev
python-misopy (VCS, UP)					0.5.4+dfsg-1		bio-dev
python-mne (PTS, VCS, UP)	1.9.0-2	1.9.0-2	1.9.0-2			1.10.2	imaging-dev
python-multipletau (PTS, VCS, UP)	0.4.1+ds-1	0.4.1+ds-1	0.4.1+ds-1			0.4.1	physics
python-nanoget (PTS, VCS, UP)	1.19.3-1	1.19.3-1	1.19.3-1			1.19.3	bio bio-dev covid-19
python-nanomath (PTS, VCS, UP)	1.2.1+ds-1	1.4.0+ds-1	1.4.0+ds-1			1.4.0	bio covid-19
python-ncls (PTS, VCS, UP)	0.0.63-hotfix+ds-1	0.0.63-hotfix+ds-1	0.0.63-hotfix+ds-1			0.0.63-hotfix	bio bio-dev
python-pairix (PTS, VCS, UP)	0.3.8-1	0.3.8-1	0.3.8-1			0.3.9	bio-dev covid-19
python-pangolearn (PTS, VCS, UP)	2022-07-09+dfsg-2	2022-07-09+dfsg-2	2022-07-09+dfsg-2			2022-07-09	bio-dev
python-parasail (PTS, VCS, UP)	1.3.3-1	1.3.3-1	1.3.3-1			1.3.3	bio-dev
python-pauvre (PTS, VCS, UP)	0.2.3-4	0.2.3-4	0.2.3-4			0.2.3	covid-19
python-pbcommand (PTS, VCS, UP)	2.1.1+git20231020.28d1635-1		2.1.1+git20231020.28d1635-2			2.1.1+git20231020.28d1635	bio-dev covid-19
python-pbcore (PTS, VCS, UP)	2.1.2+dfsg-11		2.1.2+dfsg-13			2.1.2	bio-dev covid-19
python-py2bit (PTS, VCS, UP)	0.3.3-1	0.3.3-1	0.3.3-1			0.3.3	bio bio-dev
python-pyani (PTS, VCS, UP)	0.2.13-1	0.2.13-1	0.2.13-1			0.2.13.1	bio-dev covid-19
python-pybedtools (PTS, VCS, UP)	0.10.0-4	0.10.0-5	0.10.0-5			0.12.0	bio bio-dev covid-19
python-pycosat (PTS, VCS, UP)	0.6.6+dfsg-2	0.6.6+dfsg-2	0.6.6+dfsg-2			0.6.6	bio-dev
python-pyfaidx (PTS, VCS, UP)	0.8.1.3-2	0.8.1.3-2	0.8.1.3-2			0.9.0.3	bio bio-dev covid-19
python-pymummer (PTS, VCS, UP)	0.11.0-5	0.11.0-5	0.11.0-5				bio-dev
python-pysam (PTS, VCS, UP)	0.23.0+ds-1	0.23.0+ds-1	0.23.0+ds-1			0.23.3	bio bio-dev covid-19
python-pyspoa (PTS, VCS, UP)	0.2.1-2	0.2.1-2	0.2.1-2			0.3.1	bio-dev
python-pyvcf (PTS, VCS, UP)	0.6.8+git20170215.476169c-11	0.6.8+git20170215.476169c-11	0.6.8+git20170215.476169c-11			0.6.8+git20170215.476169c	bio bio-dev covid-19
python-questplus (PTS, VCS, UP)	2023.1-3	2023.1-3	2023.1-3			2023.1	covid-19
python-ruffus (PTS, VCS, UP)	2.8.4-7	2.8.4-7	2.8.4-7			2.8.4	bio-dev
python-scanpy (VCS, UP)					1.9.6-1		bio-dev covid-19
python-scitrack (PTS, VCS, UP)	2024.10.8-1	2024.10.8-1	2024.10.8-1			2024.10.8	covid-19
python-screed (PTS, VCS, UP)	1.1.3-1	1.1.3-1	1.1.3-1			1.1.3	bio-dev covid-19
python-seqcluster (PTS, VCS, UP)	1.2.9+ds-5	1.2.9+ds-5	1.2.9+ds-5				bio bio-dev covid-19
python-skbio (PTS, VCS, UP)	0.6.2-4	0.6.3-1	0.6.3-1			0.7.0	bio-dev
python-sqt (PTS, VCS, UP)	0.8.0-9	0.8.0-9	0.8.0-9			0.8.0	bio bio-dev
python-streamz (PTS, VCS, UP)	0.6.4-2	0.6.4-3	0.6.4-3			0.6.4	bio-dev covid-19
python-tinyalign (PTS, VCS, UP)	0.2.2-1	0.2.2-1	0.2.2-1			0.2.2	bio bio-dev covid-19
python-tornado (PTS, VCS, UP)	6.4.2-3	6.5.2-3	6.5.2-3			6.5.2	covid-19
python-treetime (PTS, VCS, UP)	0.11.4-1	0.11.4-1	0.11.4-1			0.11.4	bio bio-dev bio-phylogeny covid-19 epi
python-wdlparse (PTS, VCS, UP)	0.1.0-3	0.1.0-3	0.1.0-3			0.1.0	bio-dev
pytorch (PTS, VCS, UP)	2.6.0+dfsg-7	2.6.0+dfsg-9	2.6.0+dfsg-9			2.9.0	bio-dev covid-19 epi
pytorch-vision (PTS, VCS, UP)	0.21.0-3	0.21.0-3	0.21.0-3			0.24.0	imaging-dev
pyxid (PTS, VCS, UP)	1.0-6	1.0-6	1.0-6			1.0	imaging
pyxnat (PTS, VCS, UP)	1.6.3-1	1.6.3-1	1.6.3-1			1.6.3	imaging-dev
q2-alignment (PTS, VCS, UP)			2024.5.0-1			2025.7.0	bio bio-dev
q2-composition (VCS, UP)					2021.8.0+ds-1		bio bio-dev
q2-cutadapt (PTS, VCS, UP)			2024.5.0-1			2025.7.0	bio bio-dev covid-19
q2-dada2 (PTS, VCS, UP)			2024.5.0-1			2025.7.0	bio bio-dev
q2-deblur (VCS, UP)					2023.9.0-1		bio bio-dev
q2-demux (PTS, VCS, UP)			2024.5.0+dfsg-1			2025.7.0	bio bio-dev
q2-diversity (VCS, UP)					2021.8.0-1		bio bio-dev
q2-emperor (PTS, VCS, UP)			2024.5.0-2			2025.7.0	bio bio-dev
q2-feature-classifier (PTS, VCS, UP)			2024.5.0-1			2025.7.0	bio bio-dev
q2-feature-table (PTS, VCS, UP)			2024.5.0+dfsg-1			2025.7.0	bio bio-dev covid-19
q2-fragment-insertion (PTS, VCS, UP)			2024.5.0-1			2025.7.0	bio bio-dev
q2-gneiss (VCS, UP)					2020.11.1-1		bio bio-dev
q2-longitudinal (VCS, UP)					2023.9.1+ds-1		bio bio-dev
q2-metadata (PTS, VCS, UP)			2024.5.0+dfsg-1			2025.7.0	bio bio-dev
q2-phylogeny (PTS, VCS, UP)			2024.5.0-1	2022.11.1-1		2025.7.0	bio bio-dev
q2-quality-control (PTS, VCS, UP)			2024.5.0-2			2025.7.0	bio bio-dev
q2-quality-filter (PTS, VCS, UP)			2024.5.0-1			2025.7.0	bio bio-dev covid-19
q2-sample-classifier (PTS, VCS, UP)			2024.5.0-2			2025.7.0	bio bio-dev
q2-taxa (PTS, VCS, UP)			2024.5.0+dfsg-1			2025.7.0	bio bio-dev
q2-types (PTS, VCS, UP)			2024.5.0-1			2025.7.0	bio bio-dev
q2-vsearch (VCS, UP)					2023.9.0-1		bio bio-dev
q2cli (PTS, VCS, UP)			2024.5.0-2			2025.7.0	bio bio-dev
q2templates (PTS, VCS, UP)	2024.5.0+ds-3	2024.5.0+ds-3	2024.5.0+ds-3				bio bio-dev
qcat (PTS, VCS, UP)	1.1.0-7	1.1.0-8	1.1.0-8			1.1.0	bio covid-19
qcumber (PTS, VCS, UP)	2.3.0-2	2.3.0-2	2.3.0-2				bio
qiime (PTS, VCS, UP)			2024.5.0-1			2025.7.0	bio bio-dev cloud
qrisk2 (PTS, VCS, UP)	0.1.20150729-7	0.1.20150729-7	0.1.20150729-7			0.No-Track	practice
qtlreaper (VCS, UP)					1.1.1-1		bio
qtltools (PTS, VCS, UP)	1.3.1+dfsg-4	1.3.1+dfsg-4	1.3.1+dfsg-4			1.3.1	bio
qualimap (VCS, UP)					2.2.1+dfsg-1		bio covid-19
quast (VCS, UP)					5.0.2+dfsg-1		bio covid-19
quicktree (PTS, VCS, UP)	2.5-6	2.5-6	2.5-6			2.5	bio bio-phylogeny covid-19
quitcount (PTS, VCS, UP)	3.1.4-4	3.1.4-4	3.1.4-4			3.1.4	tools
quorum (PTS, VCS, UP)	1.1.2-2	1.1.2-2	1.1.2-2			1.1.2	bio
qutemol (PTS, VCS, UP)	0.4.1~cvs20081111-15	0.4.1~cvs20081111-15	0.4.1~cvs20081111-15			0.4	bio
r-base (PTS, VCS, UP)	4.5.0-3	4.5.1-1	4.5.1-1			4.5.1	physics
r-bioc-affxparser (PTS, VCS, UP)	1.78.0-3	1.78.0-3	1.78.0-3			1.80.0	bio-dev
r-bioc-affy (PTS, VCS, UP)	1.84.0-2	1.84.0-2	1.84.0-2			1.86.0	bio-dev
r-bioc-affyio (PTS, VCS, UP)	1.76.0-2	1.76.0-2	1.76.0-2			1.78.0	bio-dev
r-bioc-altcdfenvs (PTS, VCS, UP)	2.68.0-2	2.68.0-2	2.68.0-2			2.70.0	bio-dev
r-bioc-annotate (PTS, VCS, UP)	1.84.0+dfsg-2	1.84.0+dfsg-2	1.84.0+dfsg-2			1.86.1	bio bio-dev
r-bioc-annotationdbi (PTS, VCS, UP)	1.68.0-2	1.68.0-2	1.68.0-2			1.70.0	bio-dev
r-bioc-annotationhub (PTS, VCS, UP)	3.14.0+dfsg-2	3.14.0+dfsg-2	3.14.0+dfsg-2			3.16.1	bio bio-dev
r-bioc-aroma.light (PTS, VCS, UP)	3.36.0-2	3.36.0-2	3.36.0-2			3.38.0	bio bio-dev
r-bioc-arrayexpress (PTS, VCS, UP)	1.66.0-2	1.66.0-2	1.66.0-2			1.68.0	bio-dev
r-bioc-beachmat (PTS, VCS, UP)	2.22.0+ds-2	2.22.0+ds-3	2.22.0+ds-3			2.24.0	bio
r-bioc-biobase (PTS, VCS, UP)	2.66.0-2	2.66.0-2	2.66.0-2			2.68.0	bio-dev
r-bioc-biocgenerics (PTS, VCS, UP)	0.52.0-2	0.52.0-2	0.52.0-2			0.54.1	bio-dev
r-bioc-biocneighbors (PTS, VCS, UP)	2.0.1+ds-2	2.0.1+ds-2	2.0.1+ds-2			2.2.0	bio bio-dev
r-bioc-biocsingular (PTS, VCS, UP)	1.22.0+ds-2	1.22.0+ds-2	1.22.0+ds-2			1.24.0	bio
r-bioc-biomart (PTS, VCS, UP)	2.62.1+dfsg-1	2.62.1+dfsg-1	2.62.1+dfsg-1			2.64.0	bio-dev
r-bioc-biomformat (PTS, VCS, UP)	1.34.0+dfsg-2	1.34.0+dfsg-2	1.34.0+dfsg-2			1.36.0	bio-dev
r-bioc-biostrings (PTS, VCS, UP)	2.74.1+dfsg-2	2.74.1+dfsg-2	2.74.1+dfsg-2			2.76.0	bio bio-dev
r-bioc-biovizbase (PTS, VCS, UP)	1.54.0-2	1.54.0-2	1.54.0-2			1.56.0	bio-dev
r-bioc-bridgedbr (VCS, UP)					2.4.0+dfsg-1		bio-dev
r-bioc-bsgenome (PTS, VCS, UP)	1.74.0-2	1.74.0-2	1.74.0-2			1.76.0	bio-dev
r-bioc-cner (PTS, VCS, UP)	1.42.0+dfsg-3	1.42.0+dfsg-3	1.42.0+dfsg-3			1.43.0	bio bio-dev
r-bioc-complexheatmap (PTS, VCS, UP)	2.22.0+dfsg-2	2.22.0+dfsg-2	2.22.0+dfsg-2			2.24.1	bio-dev
r-bioc-ctc (PTS, VCS, UP)	1.80.0-2	1.80.0-2	1.80.0-2			1.82.0	bio bio-dev
r-bioc-cummerbund (PTS, VCS, UP)	2.48.0-2	2.48.0-2	2.48.0-2			2.50.0	bio bio-dev
r-bioc-dada2 (PTS, VCS, UP)	1.34.0+dfsg-2	1.34.0+dfsg-2	1.34.0+dfsg-2			1.36.0	bio-dev
r-bioc-deseq2 (PTS, VCS, UP)	1.46.0+dfsg-2	1.46.0+dfsg-2	1.46.0+dfsg-2			1.48.2	bio bio-dev
r-bioc-dnacopy (PTS, VCS, UP)	1.80.0-2	1.80.0-2	1.80.0-2			1.82.0	bio bio-dev
r-bioc-ebseq (PTS, VCS, UP)	2.4.0-2	2.4.0-2	2.4.0-2			2.6.0	bio bio-dev
r-bioc-edger (PTS, VCS, UP)	4.4.2+dfsg-1	4.4.2+dfsg-1	4.4.2+dfsg-1			4.6.3	bio bio-ngs cloud statistics
r-bioc-ensembldb (PTS, VCS, UP)	2.30.0+dfsg-3	2.30.0+dfsg-3	2.30.0+dfsg-3			2.32.0	bio bio-dev
r-bioc-experimenthub (PTS, VCS, UP)	2.14.0+ds-2	2.14.0+ds-2	2.14.0+ds-2			2.16.1	bio
r-bioc-genefilter (PTS, VCS, UP)	1.88.0-2	1.88.0-2	1.88.0-2			1.90.0	bio bio-dev
r-bioc-geneplotter (PTS, VCS, UP)	1.84.0+dfsg-2	1.84.0+dfsg-2	1.84.0+dfsg-2			1.86.0	bio bio-dev
r-bioc-genomeinfodb (PTS, VCS, UP)	1.42.3+dfsg-1	1.42.3+dfsg-1	1.42.3+dfsg-1			1.44.3	bio-dev
r-bioc-genomicalignments (PTS, VCS, UP)	1.42.0-2	1.42.0-2	1.42.0-2			1.44.0	bio bio-dev
r-bioc-genomicfeatures (PTS, VCS, UP)	1.58.0+dfsg-2	1.58.0+dfsg-2	1.58.0+dfsg-2			1.60.0	bio-dev
r-bioc-genomicfiles (PTS, VCS, UP)	1.42.0+dfsg-2	1.42.0+dfsg-2	1.42.0+dfsg-2			1.44.1	bio
r-bioc-genomicranges (PTS, VCS, UP)	1.58.0+dfsg-2	1.58.0+dfsg-2	1.58.0+dfsg-2			1.60.0	bio bio-dev
r-bioc-geoquery (PTS, VCS, UP)	2.74.0+dfsg-2	2.74.0+dfsg-2	2.74.0+dfsg-2			2.76.0	bio bio-dev
r-bioc-go.db (PTS, VCS, UP)	3.20.0-2	3.20.0-2	3.20.0-2			3.21.0	bio bio-dev
r-bioc-graph (PTS, VCS, UP)	1.84.1-2	1.84.1-2	1.84.1-2			1.86.0	bio-dev
r-bioc-grohmm (PTS, VCS, UP)	1.40.3-3	1.40.3-3	1.40.3-3			1.42.0	bio
r-bioc-gseabase (PTS, VCS, UP)	1.68.0+ds-2	1.68.0+ds-2	1.68.0+ds-2			1.70.1	bio-dev
r-bioc-gsva (PTS, VCS, UP)	2.0.5+ds-1	2.0.5+ds-1	2.0.5+ds-1			2.2.1	bio-dev
r-bioc-gviz (PTS, VCS, UP)	1.50.0+dfsg-2	1.50.0+dfsg-2	1.50.0+dfsg-2			1.52.0	bio bio-dev
r-bioc-hilbertvis (PTS, VCS, UP)	1.64.0-2	1.64.0-2	1.64.0-2			1.66.1	bio bio-ngs cloud
r-bioc-htsfilter (PTS, VCS, UP)	1.46.0+dfsg-2	1.46.0+dfsg-2	1.46.0+dfsg-2			1.48.0	bio covid-19
r-bioc-hypergraph (PTS, VCS, UP)	1.78.0-2	1.78.0-2	1.78.0-2			1.80.0	bio-dev
r-bioc-impute (PTS, VCS, UP)	1.80.0-2	1.80.0-2	1.80.0-2			1.82.0	bio bio-dev
r-bioc-iranges (PTS, VCS, UP)	2.40.1-3	2.40.1-3	2.40.1-3			2.42.0	bio-dev
r-bioc-isoformswitchanalyzer (PTS, VCS, UP)	2.6.0+ds-2	2.6.0+ds-2	2.6.0+ds-2			2.8.0	bio
r-bioc-limma (PTS, VCS, UP)	3.62.2+dfsg-1	3.62.2+dfsg-1	3.62.2+dfsg-1			3.64.3	bio bio-dev covid-19 statistics
r-bioc-makecdfenv (PTS, VCS, UP)	1.82.0-2	1.82.0-2	1.82.0-2			1.84.0	bio-dev
r-bioc-megadepth (PTS, VCS, UP)	1.16.0+ds-2	1.16.0+ds-2	1.16.0+ds-2			1.18.0	bio
r-bioc-mergeomics (PTS, VCS, UP)	1.34.0-2	1.34.0-2	1.34.0-2			1.36.0	bio bio-dev
r-bioc-metagenomeseq (PTS, VCS, UP)	1.48.1-1	1.48.1-1	1.48.1-1			1.50.0	bio bio-dev
r-bioc-mofa (PTS, VCS, UP)	1.6.1+dfsg-15	1.6.1+dfsg-16	1.6.1+dfsg-16			0.No-Track	bio bio-dev
r-bioc-mofa2 (PTS, VCS, UP)		1.16.0+ds-4	1.16.0+ds-4			1.18.0	bio
r-bioc-multiassayexperiment (PTS, VCS, UP)	1.32.0+dfsg-2	1.32.0+dfsg-2	1.32.0+dfsg-2			1.34.0	bio bio-dev
r-bioc-multtest (PTS, VCS, UP)	2.62.0-2	2.62.0-2	2.62.0-2			2.64.0	statistics
r-bioc-mutationalpatterns (PTS, VCS, UP)	3.16.0+dfsg-2	3.16.0+dfsg-2	3.16.0+dfsg-2			3.18.0	bio covid-19
r-bioc-oligo (PTS, VCS, UP)	1.70.0+ds-3	1.70.0+ds-3	1.70.0+ds-3			1.72.0	bio-dev
r-bioc-oligoclasses (PTS, VCS, UP)	1.68.0-2	1.68.0-2	1.68.0-2			1.70.0	bio-dev
r-bioc-org.hs.eg.db (PTS, VCS, UP)	3.20.0-3	3.20.0-3	3.20.0-3			3.21.0	bio bio-dev
r-bioc-org.mm.eg.db (VCS, UP)					3.11.4-1		bio
r-bioc-pcamethods (PTS, VCS, UP)	1.98.0-2	1.98.0-2	1.98.0-2			2.0.0	bio bio-dev
r-bioc-phyloseq (PTS, VCS, UP)	1.50.0+dfsg-2	1.50.0+dfsg-2	1.50.0+dfsg-2			1.52.0	bio bio-dev
r-bioc-preprocesscore (PTS, VCS, UP)	1.68.0+ds-2	1.68.0+ds-2	1.68.0+ds-2			1.70.0	bio-dev
r-bioc-purecn (PTS, VCS, UP)	2.12.0+dfsg-2	2.12.0+dfsg-2	2.12.0+dfsg-2			2.14.1	bio-dev
r-bioc-pwmenrich (PTS, VCS, UP)	4.42.0-2	4.42.0-2	4.42.0-2			4.44.0	covid-19
r-bioc-qusage (PTS, VCS, UP)	2.40.0-2	2.40.0-2	2.40.0-2			2.42.0	bio bio-dev
r-bioc-qvalue (PTS, VCS, UP)	2.38.0-2	2.38.0-2	2.38.0-2			2.40.0	statistics
r-bioc-rbgl (PTS, VCS, UP)	1.82.0+dfsg-2	1.82.0+dfsg-2	1.82.0+dfsg-2			1.84.0	bio-dev
r-bioc-rcpi (PTS, VCS, UP)	1.42.0+ds-2	1.42.0+ds-2	1.42.0+ds-2			1.44.0	covid-19
r-bioc-rgsepd (PTS, VCS, UP)	1.38.0-2	1.38.0-2	1.38.0-2			1.40.0	covid-19
r-bioc-rsamtools (PTS, VCS, UP)	2.22.0+dfsg-2	2.22.0+dfsg-2	2.22.0+dfsg-2			2.24.1	bio-dev covid-19
r-bioc-rsubread (PTS, VCS, UP)	2.20.0-2	2.20.0-2	2.20.0-2			2.22.1	bio-ngs covid-19
r-bioc-rtracklayer (PTS, VCS, UP)	1.66.0-3	1.66.0-3	1.66.0-3			1.68.0	bio bio-dev
r-bioc-s4vectors (PTS, VCS, UP)	0.44.0+dfsg-2	0.44.0+dfsg-2	0.44.0+dfsg-2			0.46.0	bio-dev
r-bioc-savr (PTS, VCS, UP)	1.37.0-6	1.37.0-6	1.37.0-6			0.No-Track	bio bio-dev
r-bioc-scater (PTS, VCS, UP)	1.34.1+ds-1	1.34.1+ds-1	1.34.1+ds-1			1.36.0	bio
r-bioc-shortread (PTS, VCS, UP)	1.64.0-3	1.64.0-3	1.64.0-3			1.66.0	bio-dev
r-bioc-singlecellexperiment (PTS, VCS, UP)	1.28.1+ds-2	1.28.1+ds-2	1.28.1+ds-2			1.30.1	bio
r-bioc-snpstats (PTS, VCS, UP)	1.56.0+dfsg-2	1.56.0+dfsg-2	1.56.0+dfsg-2			1.58.0	bio-dev
r-bioc-structuralvariantannotation (PTS, VCS, UP)	1.22.0+ds-2	1.22.0+ds-2	1.22.0+ds-2			1.24.0	bio bio-dev
r-bioc-tcgabiolinks (PTS, VCS, UP)	2.34.1+dfsg-1	2.34.1+dfsg-1	2.34.1+dfsg-1			2.36.0	covid-19
r-bioc-tfbstools (PTS, VCS, UP)	1.44.0+dfsg-2	1.44.0+dfsg-2	1.44.0+dfsg-2			1.46.0	bio bio-dev
r-bioc-titancna (PTS, VCS, UP)	1.44.0-2	1.44.0-2	1.44.0-2			1.45.0	bio-dev
r-bioc-tximport (PTS, VCS, UP)	1.34.0+dfsg-2	1.34.0+dfsg-2	1.34.0+dfsg-2			1.36.1	bio bio-dev
r-bioc-variantannotation (PTS, VCS, UP)	1.52.0-2	1.52.0-2	1.52.0-2			1.54.1	bio-dev
r-bioc-xvector (PTS, VCS, UP)	0.46.0-2	0.46.0-2	0.46.0-2			0.48.0	bio-dev
r-cran-ade4 (PTS, VCS, UP)	1.7-23-1	1.7-23-1	1.7-23-1			1.7-23	statistics
r-cran-adegenet (PTS, VCS, UP)	2.1.11-1	2.1.11-1	2.1.11-1			2.1.11	bio bio-dev
r-cran-adephylo (PTS, VCS, UP)	1.1-17-1	1.1-17-1	1.1-17-1			1.1-17	bio bio-dev
r-cran-alakazam (PTS, VCS, UP)	1.3.0-1	1.3.0-1	1.3.0-1	1.3.0-2~0exp0		1.4.1	bio covid-19
r-cran-amap (PTS, VCS, UP)	0.8-20-2	0.8-20-2	0.8-20-2			0.8-20	bio bio-dev
r-cran-ape (PTS, VCS, UP)	5.8-1-1	5.8-1-1	5.8-1-1			5.8-1	bio
r-cran-beeswarm (PTS, VCS, UP)	0.4.0-1	0.4.0-1	0.4.0-1			0.4.0	statistics
r-cran-bio3d (PTS, VCS, UP)	2.4-5-1	2.4-5-1	2.4-5-1			2.4-5	bio
r-cran-biwt (PTS, VCS, UP)	1.0.1-1	1.0.1-1	1.0.1-1			1.0.1	bio bio-dev
r-cran-boolnet (PTS, VCS, UP)	2.1.9-1	2.1.9-1	2.1.9-1			2.1.9	bio bio-dev
r-cran-cmprsk (PTS, VCS, UP)	2.2-12-1	2.2-12-1	2.2-12-1			2.2-12	epi
r-cran-corrplot (PTS, VCS, UP)	0.95-1	0.95-1	0.95-1			0.95	bio bio-dev
r-cran-covid19 (VCS, UP)					0.2.1-1		covid-19 epi
r-cran-covid19us (PTS, VCS, UP)	0.1.9-1	0.1.9-1	0.1.9-1			0.1.9	covid-19 epi
r-cran-diagnosismed (PTS, VCS, UP)	0.2.3-7	0.2.3-7	0.2.3-7			0.2.3	covid-19 epi
r-cran-distory (PTS, VCS, UP)	1.4.5-1	1.4.5-1	1.4.5-1			1.4.5	bio bio-dev
r-cran-dosefinding (PTS, VCS, UP)	1.3-1-1	1.3-1-1	1.3-1-1			1.4-1	pharmacy
r-cran-drinsight (VCS, UP)					0.1.1-1		bio bio-dev
r-cran-dt (PTS, VCS, UP)	0.33+dfsg-1	0.33+dfsg-1	0.33+dfsg-1			0.34.0	bio-dev
r-cran-dynamictreecut (PTS, VCS, UP)	1.63-1-3	1.63-1-3	1.63-1-3			1.63-1	bio bio-dev
r-cran-epi (PTS, VCS, UP)	2.59-1	2.60-1	2.60-1			2.61	covid-19 epi
r-cran-epibasix (PTS, VCS, UP)	1.5-2	1.5-2	1.5-2			1.5	covid-19 epi
r-cran-epicalc (PTS, VCS, UP)	2.15.1.0-5	2.15.1.0-5	2.15.1.0-5			2.15.1.0	covid-19 epi
r-cran-epiestim (PTS, VCS, UP)	2.2-4+dfsg-1	2.2-4+dfsg-1	2.2-4+dfsg-1			2.2-5	covid-19 epi
r-cran-epir (PTS, VCS, UP)	2.0.80+dfsg-1	2.0.80+dfsg-1	2.0.80+dfsg-1				bio covid-19 epi
r-cran-epitools (PTS, VCS, UP)	0.5-10.1-2	0.5-10.1-2	0.5-10.1-2			0.5-10.1	covid-19 epi
r-cran-fastcluster (PTS, VCS, UP)	1.3.0-1	1.3.0-1	1.3.0-1			1.3.0	bio-dev
r-cran-fitbitscraper (PTS, VCS, UP)	0.1.8-6	0.1.8-6	0.1.8-6			0.1.8	tools
r-cran-fitcoach (PTS, VCS, UP)			1.0-4			1.0	tools
r-cran-fitdistrplus (PTS, VCS, UP)	1.2-2-1	1.2-2-1	1.2-2-1			1.2-4	bio bio-dev
r-cran-forecast (PTS, VCS, UP)	8.23.0-1	8.23.0-1	8.23.0-1			8.24.0	bio bio-dev
r-cran-future.apply (PTS, VCS, UP)	1.11.3+dfsg-1	1.11.3+dfsg-1	1.11.3+dfsg-1			1.20.0	bio-dev
r-cran-future.batchtools (PTS, VCS, UP)	0.12.1+dfsg-1	0.12.1+dfsg-1	0.12.1+dfsg-1			0.21.0	bio-dev
r-cran-genetics (PTS, VCS, UP)	1.3.8.1.3-1	1.3.8.1.3-1	1.3.8.1.3-1			1.3.8.1.3	bio-dev
r-cran-gprofiler2 (PTS, VCS, UP)	0.2.3+dfsg-1	0.2.3+dfsg-1	0.2.3+dfsg-1			0.2.3	bio bio-dev
r-cran-haplo.stats (PTS, VCS, UP)	1.9.7-1	1.9.7-1	1.9.7-1			1.9.7	bio-dev
r-cran-hms (PTS, VCS, UP)	1.1.3-1	1.1.3-1	1.1.3-1			1.1.4	covid-19
r-cran-ica (PTS, VCS, UP)	1.0-3-1	1.0-3-1	1.0-3-1			1.0-3	bio-dev
r-cran-incidence (PTS, VCS, UP)	1.7.5-1	1.7.5-1	1.7.5-1			1.7.6	covid-19 epi
r-cran-itertools (PTS, VCS, UP)	0.1-3-3	0.1-3-3	0.1-3-3			0.1-3	bio-dev
r-cran-kaos (PTS, VCS, UP)	0.1.2-2	0.1.2-2	0.1.2-2			0.1.2	bio bio-dev
r-cran-kernelheaping (PTS, VCS, UP)	2.3.0-1	2.3.0-1	2.3.0-1			2.3.0	covid-19 epi
r-cran-lexrankr (PTS, VCS, UP)	0.5.2-8	0.5.2-8	0.5.2-8			0.5.2	covid-19 epi
r-cran-medadherence (PTS, VCS, UP)	1.03-6	1.03-6	1.03-6			1.03	practice
r-cran-mediana (PTS, VCS, UP)	1.0.8-3	1.0.8-3	1.0.8-3			1.0.8	covid-19
r-cran-metap (PTS, VCS, UP)	1.12-1	1.12-1	1.12-1			1.12	bio-dev
r-cran-minerva (PTS, VCS, UP)	1.5.10-1	1.5.10-1	1.5.10-1			1.5.10	bio bio-dev
r-cran-msm (PTS, VCS, UP)	1.8.2-1	1.8.2-1	1.8.2-1			1.8.2	covid-19 epi
r-cran-natserv (PTS, VCS, UP)	1.0.0+dfsg-1	1.0.0+dfsg-1	1.0.0+dfsg-1			1.0.0	bio-dev
r-cran-nmf (PTS, VCS, UP)	0.28-1	0.28-1	0.28-1			0.28	bio-dev
r-cran-optimalcutpoints (PTS, VCS, UP)	1.1-5-1	1.1-5-1	1.1-5-1			1.1-5	bio bio-dev
r-cran-parmigene (PTS, VCS, UP)	1.1.1-1	1.1.1-1	1.1.1-1			1.1.1	bio bio-dev
r-cran-pcapp (PTS, VCS, UP)	2.0-5-1	2.0-5-1	2.0-5-1			2.0-5	bio-dev
r-cran-phangorn (PTS, VCS, UP)	2.12.1+dfsg-1	2.12.1+dfsg-1	2.12.1+dfsg-1			2.12.1	bio bio-dev
r-cran-pheatmap (PTS, VCS, UP)	1.0.12-2	1.0.12-2	1.0.12-2			1.0.13	bio bio-dev
r-cran-phylobase (PTS, VCS, UP)	0.8.12-1	0.8.12-1	0.8.12-1			0.8.12	bio-dev
r-cran-phytools (PTS, VCS, UP)	2.4-4-1	2.4-4-1	2.4-4-1				bio
r-cran-prevalence (PTS, VCS, UP)	0.4.1-1	0.4.1-1	0.4.1-1			0.4.1	epi
r-cran-proc (PTS, VCS, UP)	1.18.5-1	1.18.5-1	1.18.5-1			1.19.0.1	bio-dev
r-cran-pscbs (PTS, VCS, UP)	0.67.0-3	0.67.0-3	0.67.0-3			0.68.0	bio bio-dev
r-cran-psy (PTS, VCS, UP)	1.2-1	1.2-1	1.2-1			1.2	psychology
r-cran-psych (PTS, VCS, UP)	2.4.12-1	2.4.12-1	2.4.12-1			2.5.6	psychology
r-cran-psychometric (PTS, VCS, UP)	2.4-1	2.4-1	2.4-1			2.4	psychology
r-cran-psychotree (PTS, VCS, UP)	0.16-1-1	0.16-1-1	0.16-1-1			0.16-2	psychology
r-cran-psyphy (PTS, VCS, UP)	0.3-1	0.3-1	0.3-1			0.3	psychology
r-cran-pvclust (PTS, VCS, UP)	2.2-0-2	2.2-0-2	2.2-0-2			2.2-0	cloud statistics
r-cran-qqman (PTS, VCS, UP)	0.1.9+dfsg-1	0.1.9+dfsg-1	0.1.9+dfsg-1			0.1.9	bio bio-dev typesetting
r-cran-qtl (PTS, VCS, UP)	1.70-1	1.70-1	1.70-1			1.70	bio cloud covid-19
r-cran-randomforest (PTS, VCS, UP)	4.7-1.2-1	4.7-1.2-1	4.7-1.2-1			4.7-1.2	statistics
r-cran-rann (PTS, VCS, UP)	2.6.2-1	2.6.2-1	2.6.2-1			2.6.2	bio-dev
r-cran-rcpphnsw (PTS, VCS, UP)	0.6.0+ds-1	0.6.0+ds-1	0.6.0+ds-1			0.6.0	bio bio-dev
r-cran-rentrez (PTS, VCS, UP)	1.2.3+dfsg-1	1.2.3+dfsg-1	1.2.3+dfsg-1			1.2.4	bio bio-dev
r-cran-rncl (PTS, VCS, UP)	0.8.7-1	0.8.7-1	0.8.7-1			0.8.7	bio-dev
r-cran-rnexml (PTS, VCS, UP)	2.4.11+ds-1	2.4.11+ds-1	2.4.11+ds-1			2.4.11	bio-dev
r-cran-robustrankaggreg (PTS, VCS, UP)	1.2.1-1	1.2.1-1	1.2.1-1			1.2.1	bio-dev
r-cran-rocr (PTS, VCS, UP)	1.0-11-3	1.0-11-3	1.0-11-3			1.0-11	bio-dev
r-cran-rook (PTS, VCS, UP)	1.2+dfsg-1	1.2+dfsg-1	1.2+dfsg-1			1.2	bio-dev
r-cran-rotl (PTS, VCS, UP)	3.1.0-1	3.1.0-1	3.1.0-1			3.1.0	bio bio-dev
r-cran-rpact (PTS, VCS, UP)		4.2.0-1	4.2.0-1			4.2.1	pharmacy research
r-cran-rsvd (PTS, VCS, UP)	1.0.5-1	1.0.5-1	1.0.5-1			1.0.5	bio-dev
r-cran-rwave (PTS, VCS, UP)	2.6-5-1	2.6-5-1	2.6-5-1			2.6-5	statistics
r-cran-samr (PTS, VCS, UP)	3.0-2	3.0-2	3.0-2			3.0	bio bio-dev
r-cran-sctransform (PTS, VCS, UP)	0.4.1-1	0.4.1-1	0.4.1-1			0.4.2	bio bio-dev
r-cran-seqinr (PTS, VCS, UP)	4.2-36-1	4.2-36-1	4.2-36-1			4.2-36	bio bio-dev
r-cran-seroincidence (PTS, VCS, UP)	2.0.0-3	2.0.0-3	2.0.0-3			2.0.0	covid-19 epi
r-cran-seurat (PTS, VCS, UP)	5.2.1-5	5.2.1-5	5.2.1-5			5.3.0	bio bio-dev
r-cran-sf (PTS, VCS, UP)	1.0-19+dfsg-2	1.0-19+dfsg-2	1.0-19+dfsg-2			1.0-21	covid-19 epi
r-cran-shazam (PTS, VCS, UP)	1.2.0-1	1.2.0-1	1.2.0-1			1.3.0	bio bio-dev covid-19
r-cran-sitmo (PTS, VCS, UP)	2.0.2-1	2.0.2-1	2.0.2-1			2.0.2	bio-dev
r-cran-sjplot (PTS, VCS, UP)			2.8.17+dfsg-1			2.9.0	covid-19 epi
r-cran-snowfall (PTS, VCS, UP)	1.84-6.3-1	1.84-6.3-1	1.84-6.3-1			1.84-6.3	statistics
r-cran-spp (PTS, VCS, UP)	1.16.0-2						bio covid-19
r-cran-stringi (PTS, VCS, UP)	1.8.4-1	1.8.4-1	1.8.4-1			1.8.7	covid-19
r-cran-surveillance (PTS, VCS, UP)	1.24.1-1	1.24.1-1	1.24.1-1			1.25.0	covid-19 epi
r-cran-tigger (PTS, VCS, UP)	1.1.0-1	1.1.0-1	1.1.0-1			1.1.0	bio covid-19
r-cran-treespace (PTS, VCS, UP)	1.1.4.3+dfsg-1	1.1.4.3+dfsg-1	1.1.4.3+dfsg-1			1.1.4.4	bio
r-cran-tsne (PTS, VCS, UP)	0.1-3.1-1	0.1-3.1-1	0.1-3.1-1			0.1-3.1	bio bio-dev
r-cran-vegan (PTS, VCS, UP)	2.6-10+dfsg-3	2.6-10+dfsg-3	2.6-10+dfsg-3			2.7-2	bio bio-dev cloud
r-cran-venndiagram (PTS, VCS, UP)	1.7.3-1	1.7.3-1	1.7.3-1			1.7.3	bio-dev
r-cran-waveslim (PTS, VCS, UP)	1.8.5-1	1.8.5-1	1.8.5-1			1.8.5	statistics
r-cran-wavethresh (PTS, VCS, UP)	4.7.3-1	4.7.3-1	4.7.3-1			4.7.3	statistics
r-cran-webgestaltr (PTS, VCS, UP)	0.4.6-1	0.4.6-1	0.4.6-1			0.4.6	bio bio-dev
r-cran-wgcna (PTS, VCS, UP)	1.73-1	1.73-1	1.73-1			1.73	bio
r-other-apmswapp (VCS, UP)					1.0-1		bio bio-dev
r-other-ascat (PTS, VCS, UP)	3.2.0-1	3.2.0-1	3.2.0-1			3.2.0	bio covid-19
r-other-fastbaps (VCS, UP)					1.0.4-1		bio covid-19
r-other-mott-happy (PTS, VCS, UP)	2.4-5	2.4-5	2.4-5			0.No-Site	bio cloud
r-other-rajewsky-dropbead (PTS, VCS, UP)	0.3.1+git20180221.d746c6f+ds-3	0.3.1+git20180221.d746c6f+ds-3	0.3.1+git20180221.d746c6f+ds-3			0.3.1+git20180221.d746c6f	bio
racon (PTS, VCS, UP)	1.5.0-3	1.5.0-4	1.5.0-4			1.5.0	bio
radiant (PTS, VCS, UP)	2.8.1+dfsg-2	2.8.1+dfsg-2	2.8.1+dfsg-2			2.8.1	bio
ragout (PTS, VCS, UP)	2.3-5	2.3-5	2.3-5			2.3	bio covid-19
rambo-k (PTS, VCS, UP)	1.21+dfsg-5	1.21+dfsg-5	1.21+dfsg-5				bio
rampler (PTS, VCS, UP)	2.1.1-1	2.1.1-1	2.1.1-1			2.1.1	bio
rapmap (PTS, VCS, UP)	0.15.0+dfsg-4	0.15.0+dfsg-5	0.15.0+dfsg-5			0.15.0	bio
rasmol (PTS, VCS, UP)	2.7.6.0-4		2.7.6.0-4			2.7.6.0	bio
raster3d (PTS, VCS, UP)	3.0-7-2	3.0-8-1	3.0-8-1			3.0-8	bio cloud
rate4site (PTS, VCS, UP)	3.0.0-8	3.0.0-8	3.0.0-8			0.No-Site	bio
raxml (PTS, VCS, UP)	8.2.13+dfsg-2	8.2.13+dfsg-2	8.2.13+dfsg-2			8.2.13	bio
raxml-ng (VCS, UP)					1.0.1-1		bio
ray (PTS, VCS, UP)	2.3.1-9	2.3.1-9	2.3.1-9			2.3.1	bio
rdkit (PTS, VCS, UP)	202503.1-4		202503.6-3			2025_09_1	bio-dev
rdp-alignment (PTS, VCS, UP)	1.2.0-8	1.2.0-8	1.2.0-8			1.2.0	bio
rdp-classifier (PTS, VCS, UP)			2.10.2-7			2.10.2	bio
rdp-readseq (PTS, VCS, UP)	2.0.2-9	2.0.2-9	2.0.2-9			2.0.2	bio
readseq (PTS, VCS, UP)	1-15	1-16	1-16				bio cloud
readucks (PTS, VCS, UP)			0.0.3-6			0.0.3	bio covid-19
reapr (PTS, VCS, UP)	1.0.18+dfsg-7	1.0.18+dfsg-7	1.0.18+dfsg-7			1.0.18	bio
recan (PTS, VCS, UP)	0.5+dfsg-1	0.5+dfsg-1	0.5+dfsg-1			0.5	bio covid-19
relion (PTS, VCS, UP)	3.1.3-4		3.1.3-4			5.0.1	bio bio-dev
relion-cuda (PTS, VCS, UP)			3.1.3-2			5.0.1	bio
repeatmasker (VCS, UP)					4.0.7-1		bio
repeatmasker-recon (PTS, VCS, UP)	1.08-8	1.08-8	1.08-8				bio
reprof (PTS, VCS, UP)	1.0.1-9	1.0.1-9	1.0.1-9			0.No-Site	bio bio-dev
resfinder (PTS, VCS, UP)	4.4.2-2	4.4.2-2	4.4.2-2			4.7.2	bio
resfinder-db (PTS, VCS, UP)	0.0+git20220524.fa32d9a-1	0.0+git20220524.fa32d9a-1	0.0+git20220524.fa32d9a-1			0.0+git20250909.c0aa05c	bio
rna-star (PTS, VCS, UP)	2.7.11b+dfsg-2	2.7.11b+dfsg-2	2.7.11b+dfsg-2			2.7.11b	bio bio-ngs covid-19
rnahybrid (PTS, VCS, UP)	2.1.2-8	2.1.2-8	2.1.2-8			0.No-Track	bio cloud
roadtrips (VCS, UP)					2.0+dfsg-1		bio
roary (PTS, VCS, UP)	3.13.0+dfsg-2	3.13.0+dfsg-2	3.13.0+dfsg-2			3.13.0	bio
rockhopper (PTS, VCS, UP)	2.0.3+dfsg2-5	2.0.3+dfsg2-5	2.0.3+dfsg2-5			2.0.3	bio
roguenarok (PTS, VCS, UP)	1.0.1-3	1.0.1-3.1	1.0.1-3.1			1.0.1	bio
rosa (VCS, UP)					1.0-1		bio covid-19
rsat (VCS, UP)					2016-03-14+dfsg-1		bio
rsem (PTS, VCS, UP)	1.3.3+dfsg-3	1.3.3+dfsg-3	1.3.3+dfsg-3			1.3.3	bio covid-19
rstudio (VCS, UP)					2022.07.1+554-1		statistics
rtax (PTS, VCS, UP)	0.984-8	0.984-8	0.984-8				bio cloud
ruby-bio (PTS, VCS, UP)	2.0.5-1	2.0.6-1	2.0.6-1			2.0.6	bio-dev covid-19
ruby-crb-blast (PTS, VCS, UP)	0.6.9-5	0.6.9-5	0.6.9-5			0.6.9	bio-dev
ruby-rgfa (PTS, VCS, UP)	1.3.1+dfsg-3	1.3.1+dfsg-3	1.3.1+dfsg-3			1.3.1	bio-dev
runcircos-gui (PTS, VCS, UP)	0.0+git20200528.82dda8c-1	0.0+git20200528.82dda8c-1	0.0+git20200528.82dda8c-1			0.0+git20200528.82dda8c	bio
sailfish (VCS, UP)					0.10.1+dfsg-1		bio covid-19
saint (PTS, VCS, UP)	2.5.0+dfsg-4	2.5.0+dfsg-4	2.5.0+dfsg-4			2.5.0	bio
salmid (PTS, VCS, UP)	0.1.23-5	0.1.23-5	0.1.23-5			0.1.23	bio
salmon (PTS, VCS, UP)	1.10.2+ds1-1		1.10.2+ds1-1			1.10.3	bio covid-19
sambamba (PTS, VCS, UP)	1.0.1+dfsg-2	1.0.1+dfsg-2	1.0.1+dfsg-2			1.0.1	bio
samblaster (PTS, VCS, UP)	0.1.26-4	0.1.26-4	0.1.26-4			0.1.26	bio covid-19
samclip (PTS, VCS, UP)	0.4.0-4	0.4.0-4	0.4.0-4			0.4.0	bio covid-19
samtools (PTS, VCS, UP)	1.21-1	1.22.1-1	1.22.1-1			1.22.1	bio bio-dev bio-ngs cloud covid-19
samtools-legacy (PTS, VCS, UP)	0.1.19+dfsg-6	0.1.19+dfsg-6	0.1.19+dfsg-6			0.1.19	bio-dev
sap (VCS, UP)					1.1.3-1		bio
savvy (PTS, VCS, UP)	2.1.0-3	2.1.0-4	2.1.0-4			2.1.0	bio bio-dev
sbmltoolbox (PTS, VCS, UP)	4.1.0-5.1		4.1.0-5.1			4.1.0	bio-dev
scoary (PTS, VCS, UP)	1.6.16-10	1.6.16-10	1.6.16-10			1.6.16	bio
scrappie (PTS, VCS, UP)	1.4.2-8	1.4.2-9	1.4.2-9			1.4.2	bio covid-19
scrm (PTS, VCS, UP)	1.7.4-2	1.7.4-2	1.7.4-2			1.7.4	bio
scythe (PTS, VCS, UP)	0.994+git20141017.20d3cff-5	0.994+git20141017.20d3cff-5	0.994+git20141017.20d3cff-5			0.994+git20141017.20d3cff	bio
seaview (PTS, VCS, UP)	5.0.5-3	5.0.5-3	5.0.5-3				bio bio-phylogeny
seer (PTS, VCS, UP)	1.1.4-8	1.1.4-8	1.1.4-8			1.1.4	bio
segemehl (PTS, VCS, UP)	0.3.4-5	0.3.4-5	0.3.4-5			0.3.4	bio
seirsplus (PTS, VCS, UP)	1.0.9-2	1.0.9-2	1.0.9-2			1.0.9	covid-19 epi
sepp (PTS, VCS, UP)			4.5.5+dfsg-2			4.5.6	bio covid-19
seq-gen (PTS, VCS, UP)	1.3.4-2		1.3.4-2			1.3.5	bio
seq-seq-pan (VCS, UP)					1.0.1-1		bio
seqan-needle (PTS, VCS, UP)	1.0.3+ds-1	1.0.3+ds-1	1.0.3+ds-1			1.0.3	bio
seqan-raptor (PTS, VCS, UP)	3.0.1+ds-9	3.0.1+ds-10	3.0.1+ds-10			3.0.1	bio
seqan2 (PTS, VCS, UP)	2.4.0+dfsg-16	2.4.0+dfsg-16	2.4.0+dfsg-16	2.5.0~rc3+dfsg-1		2.5.1	bio bio-dev cloud
seqan3 (PTS, VCS, UP)	3.4.0~rc.3+ds-4	3.4.0+ds-1	3.4.0+ds-1			3.4.0	bio-dev covid-19
seqkit (PTS, VCS, UP)	2.9.0+ds-1	2.9.0+ds-1	2.10.1+ds-1			2.10.1	bio covid-19
seqmagick (PTS, VCS, UP)	0.8.6-3	0.8.6-4	0.8.6-4			0.8.6	bio covid-19
seqprep (PTS, VCS, UP)	1.3.2-9	1.3.2-9	1.3.2-10			1.3.2	bio
seqsero (PTS, VCS, UP)	1.0.1+dfsg-6	1.0.1+dfsg-6	1.0.1+dfsg-6			1.0.1	bio
seqtk (PTS, VCS, UP)	1.4-2	1.4-2	1.4-2			1.5	bio
seqtools (PTS, VCS, UP)	4.44.1+dfsg-7.1	4.44.1+dfsg-7.1	4.44.1+dfsg-7.1				bio
seqwish (VCS, UP)					0.7.1-1		bio covid-19
sga (PTS, VCS, UP)	0.10.15-7	0.10.15-7	0.10.15-7			0.10.15	bio
shapeit4 (PTS, VCS, UP)	4.2.2+dfsg-1	4.2.2+dfsg-1	4.2.2+dfsg-1			4.2.2	covid-19
shasta (PTS, VCS, UP)	0.12.0-1	0.12.0-1	0.12.0-1	0.12.0-2		0.14.0	bio bio-dev
shovill (PTS, VCS, UP)	1.1.0-9	1.1.0-9	1.1.0-9			1.1.0	bio covid-19
sibelia (PTS, VCS, UP)	3.0.7+dfsg-3	3.0.7+dfsg-5	3.0.7+dfsg-5			3.0.7	bio
sibsim4 (PTS, VCS, UP)	0.20-5	0.20-5	0.20-5			0.20	bio cloud
sickle (PTS, VCS, UP)	1.33+git20150314.f3d6ae3-2	1.33+git20150314.f3d6ae3-2	1.33+git20150314.f3d6ae3-2			1.33+git20150314.f3d6ae3	bio
sideretro (PTS, VCS, UP)	1.1.6-2	1.1.6-2	1.1.6-2			1.1.6	bio
sift (PTS, VCS, UP)	6.2.1-1	6.2.1-2	6.2.1-2			6.2.1	bio
sight (PTS, VCS, UP)	25.0.0-1	25.1.0-1	25.1.0-1			25.1.0	imaging imaging-dev
sigma-align (PTS, VCS, UP)	1.1.3-9	1.1.3-9	1.1.3-9				bio bio-phylogeny cloud
signalalign (VCS, UP)					0.0+git20170131.3293fad+dfsg-1		bio covid-19
sigviewer (PTS, VCS, UP)	0.6.4-3	0.6.4-3	0.6.4-3			0.6.4	imaging
sim4 (PTS, VCS, UP)	0.0.20121010-8	0.0.20121010-9	0.0.20121010-9			2012-10-10	bio cloud
simde (PTS, VCS, UP)	0.8.2-3	0.8.2-3	0.8.2-3	0.8.2~rc1-1			covid-19
simka (PTS, VCS, UP)	1.5.3-8	1.5.3-9	1.5.3-9			1.5.3	bio
simrisc (PTS, VCS, UP)	16.02.00-1	16.02.00-1	16.02.00-1				oncology
sina (VCS, UP)					1.6.1-1		bio
sistr (VCS, UP)					1.0.2-1		bio
situs (VCS, UP)					2.7.2-1		bio
ska (PTS, VCS, UP)	1.0+dfsg-4	1.0+dfsg-6	1.0+dfsg-6			1.0	bio
skesa (PTS, VCS, UP)	2.4.0-6	2.4.0-6	2.4.0-6			2.4.0	bio
skewer (PTS, VCS, UP)	0.2.2-6	0.2.2-6	0.2.2-6			0.2.2	bio
slicer (VCS, UP)					4.10.2-1		imaging
smalt (PTS, VCS, UP)	0.7.6-13	0.7.6-13	0.7.6-13			0.7.6	bio cloud
smrtanalysis (PTS, VCS, UP)	0~20210112		0~20210112				bio covid-19
snakemake (PTS, VCS, UP)	7.32.4-7	7.32.4-7	7.32.4-7			9.13.4	bio-dev covid-19
snap (PTS, VCS, UP)	2013-11-29-11	2013-11-29-11	2013-11-29-11				bio cloud
snap-aligner (PTS, VCS, UP)	2.0.3+dfsg-2	2.0.5+dfsg-1	2.0.5+dfsg-1			2.0.5	bio
sniffles (PTS, VCS, UP)	2.6.0-1	2.6.0-1	2.6.0-1			2.7.0	bio
snippy (PTS, VCS, UP)	4.6.0+dfsg-5	4.6.0+dfsg-5	4.6.0+dfsg-5			4.6.0	bio
snp-sites (PTS, VCS, UP)	2.5.1-2	2.5.1-2	2.5.1-2			2.5.1	bio bio-dev
snpeff (PTS, VCS, UP)	5.2.f+dfsg-1	5.2.f+dfsg-1	5.2.f+dfsg-1			5.2f	bio covid-19
snpomatic (PTS, VCS, UP)	1.0-7	1.0-7	1.0-7			1.0	bio
snpsift (PTS, VCS, UP)	5.2.e+dfsg-2	5.2.e+dfsg-2	5.2.e+dfsg-2			5.2f	bio covid-19
soapaligner (PTS, VCS, UP)	2.20-5		2.20-6				bio
soapdenovo (PTS, VCS, UP)	1.05-6	1.05-7	1.05-7				bio cloud
soapdenovo2 (PTS, VCS, UP)	242+dfsg-4	242+dfsg-5	242+dfsg-5			242	bio cloud
soapsnp (PTS, VCS, UP)	1.03-5	1.03-5	1.03-5			0.No-Site	bio
solvate (PTS, VCS, UP)	1.0-3	1.0-3	1.0-3			0.No-Site	bio
sortmerna (PTS, VCS, UP)	4.3.7-2	4.3.7-3	4.3.7-3			4.3.7	bio
sourmash (PTS, VCS, UP)	4.8.14-3	4.9.4-4	4.9.4-4			4.9.4	bio
spaced (PTS, VCS, UP)	1.2.0-201605+dfsg-4	1.2.0-201605+dfsg-4	1.2.0-201605+dfsg-4			0.No-Release	bio
spades (PTS, VCS, UP)	4.0.0+really3.15.5+dfsg-1	4.0.0+really3.15.5+dfsg-3	4.0.0+really3.15.5+dfsg-3			4.2.0	bio covid-19
spaln (PTS, VCS, UP)	3.0.2+dfsg-2	3.0.2+dfsg-2	3.0.2+dfsg-2			3.0.7	bio covid-19
sparta (VCS, UP)					1.01+dfsg-1		bio
spoa (PTS, VCS, UP)	4.1.4-2	4.1.5-1	4.1.5-1			4.1.5	bio bio-dev
sprai (PTS, VCS, UP)	0.9.9.23+dfsg1-3	0.9.9.23+dfsg1-3	0.9.9.23+dfsg1-3				bio
spread-phy (PTS, VCS, UP)	1.0.7+dfsg-5	1.0.7+dfsg-5	1.0.7+dfsg-5				bio bio-phylogeny
sra-sdk (PTS, VCS, UP)	3.2.1+dfsg-4	3.2.1+dfsg-5	3.2.1+dfsg-5			3.2.1	bio bio-dev bio-ngs cloud
srf (PTS, VCS, UP)	0.1+dfsg-7	0.1+dfsg-7	0.1+dfsg-7			0.1	bio-dev
srst2 (PTS, VCS, UP)	0.2.0-13	0.2.0-13	0.2.0-13			0.2.0	bio
ssaha (VCS, UP)					3.1c-1		bio
ssake (PTS, VCS, UP)	4.0.1-2	4.0.1-2	4.0.1-2			4.0.1	bio bio-ngs cloud
ssm (PTS, VCS, UP)	1.4.0-2	1.4.0-2	1.4.0-2				bio-dev
sspace (PTS, VCS, UP)	2.1.1+dfsg-7	2.1.1+dfsg-7	2.1.1+dfsg-7			2.1.1	bio
stacks (PTS, VCS, UP)	2.68+dfsg-2	2.68+dfsg-2	2.68+dfsg-2				bio
staden (PTS, VCS, UP)	2.0.0+b11-5	2.0.0+b11-7	2.0.0+b11-7			2.0.0b11	bio
staden-io-lib (PTS, VCS, UP)	1.15.0-1.1	1.15.0-1.1	1.15.0-1.1			1-15-1	bio bio-dev cloud covid-19
strap (VCS, UP)					1.1.3-1		bio
strap-base (VCS, UP)					1.1.3-1		bio
streamlit (VCS, UP)					0.56.0-1		covid-19
strelka (VCS, UP)					2.9.10+dfsg-1		bio covid-19
stringtie (PTS, VCS, UP)	2.2.1+ds-3	2.2.1+ds-3	2.2.1+ds-3				bio covid-19
subread (PTS, VCS, UP)	2.0.8+dfsg-1	2.0.8+dfsg-1	2.0.8+dfsg-1			2.1.1	bio
suitename (PTS, VCS, UP)	0.4.130509+git20210223.ebb1325-1	0.4.130509+git20210223.ebb1325-1	0.4.130509+git20210223.ebb1325-1			0.No-Release	bio
sumaclust (PTS, VCS, UP)	1.0.36+ds-4	1.0.36+ds-4	1.0.36+ds-4				bio covid-19
sumalibs (PTS, VCS, UP)	1.0.36-5	1.0.36-5	1.0.36-5				bio-dev
sumatra (PTS, VCS, UP)	1.0.36+ds-2	1.0.36+ds-2	1.0.36+ds-2				bio
surankco (PTS, VCS, UP)	0.0.r5+dfsg-4	0.0.r5+dfsg-4	0.0.r5+dfsg-4			r5	bio
surpyvor (PTS, VCS, UP)	0.5-2	0.5-2	0.5-2			0.5	bio
survivor (PTS, VCS, UP)	1.0.7-4	1.0.7-4	1.0.7-4			1.0.7	bio
svim (PTS, VCS, UP)	2.0.0-3	2.0.0-3	2.0.0-3			2.0.0	bio
swarm-cluster (PTS, VCS, UP)	3.1.5+dfsg-2	3.1.5+dfsg-2	3.1.5+dfsg-2			3.1.5	bio
sweed (PTS, VCS, UP)	3.2.1+dfsg-6	3.2.1+dfsg-7	3.2.1+dfsg-7			3.2.1	bio
swissknife (PTS, VCS, UP)	1.80-1	1.80-1	1.80-1				bio-dev
t-coffee (PTS, VCS, UP)	13.45.0.4846264+really13.41.0.28bdc39+dfsg-1	13.45.0.4846264+really13.41.0.28bdc39+dfsg-1	13.45.0.4846264+really13.41.0.28bdc39+dfsg-1				bio bio-phylogeny cloud
tab2mage (VCS, UP)					20080626-1		bio
tacg (VCS, UP)					4.1-1		bio
tandem-genotypes (VCS, UP)					1.8.3-1		bio
tantan (PTS, VCS, UP)	51-1	51-1	51-1			51	bio
teem (PTS, VCS, UP)	1.12.0~20160122-6	1.12.0~20160122-8	1.12.0~20160122-8			1.11.0	imaging imaging-dev
terraphast (PTS, VCS, UP)	0.0+git20200413.8af2e4c+dfsg-3		0.1.0+dfsg-1			0.1.0	bio bio-dev
texlive-extra (PTS, VCS, UP)	2024.20250309-2	2025.20250927-3	2025.20250927-3				covid-19 typesetting
thera-pi (VCS, UP)					0.0.0.20130429-1		practice
theseus (PTS, VCS, UP)	3.3.0-14	3.3.0-14	3.3.0-14				bio cloud
thesias (PTS, VCS, UP)	3.1.1-3	3.1.1-4	3.1.1-4			3.1.1	bio covid-19
tiddit (PTS, VCS, UP)	3.6.1+dfsg-2	3.6.1+dfsg-2	3.6.1+dfsg-2			3.9.3	bio covid-19
tide (VCS, UP)					0.0.r15918-1		bio
tigr-glimmer (PTS, VCS, UP)	3.02b-6	3.02b-6	3.02b-6			302b	bio cloud
tigr-glimmer-mg (VCS, UP)					0.3.2-1		bio
tipp (PTS, VCS, UP)			1.0+dfsg-3			1.0	bio covid-19
tm-align (PTS, VCS, UP)	20190822+dfsg-3	20190822+dfsg-3	20190822+dfsg-3			20190822	bio bio-phylogeny
tn-seqexplorer (VCS, UP)					1.5+dfsg-1		bio
tnseq-transit (PTS, VCS, UP)	3.3.12-1	3.3.12-1	3.3.12-1			3.3.19	bio covid-19
toil (PTS, VCS, UP)	8.0.0-5	9.1.0-1	9.1.0-1			9.1.2	bio bio-dev covid-19
tombo (PTS, VCS, UP)	1.5.1-7	1.5.1-8	1.5.1-8			1.5.1	bio covid-19
toolz (PTS, VCS, UP)	1.0.0-2	1.0.0-2	1.0.0-2			1.1.0	covid-19
tophat (VCS, UP)					2.1.1+dfsg1-3		bio
tophat-recondition (PTS, VCS, UP)	1.4-3	1.4-3	1.4-3			1.4	bio covid-19
toppred (PTS, VCS, UP)	1.10-10	1.10-10	1.10-10			1.10	bio
tortoize (PTS, VCS, UP)	2.0.15-1	2.0.15-1	2.0.15-1			2.0.15	bio
trace2dbest (PTS, VCS, UP)	3.0.1-2	3.0.1-2	3.0.1-2				bio
tracetuner (PTS, VCS, UP)	3.0.6~beta+dfsg-3	3.0.6~beta+dfsg-4	3.0.6~beta+dfsg-4			3.0.6beta	bio
transdecoder (PTS, VCS, UP)	5.7.1-2	5.7.1-2	5.7.1-2			5.7.1	bio
transrate-tools (PTS, VCS, UP)	1.0.0-5	1.0.0-6	1.0.0-6			1.0.0	bio
transtermhp (PTS, VCS, UP)	2.09-5	2.09-5	2.09-5			2.09	bio
tree-puzzle (PTS, VCS, UP)	5.3~rc16+dfsg-12	5.3~rc16+dfsg-12	5.3~rc16+dfsg-12			5.2	bio bio-phylogeny cloud
treeview (PTS, VCS, UP)	1.2.0+dfsg-2	1.2.0+dfsg-2	1.2.0+dfsg-2			1.2.1	bio bio-phylogeny
treeviewx (PTS, VCS, UP)	0.5.1+git20100823.7e4d0e9-4	0.5.1+git20100823.7e4d0e9-4	0.5.1+git20100823.7e4d0e9-4			0.5.1+git20100823.7e4d0e9	bio bio-phylogeny
trf (PTS, VCS, UP)	4.09.1-6	4.09.1-6	4.09.1-6			4.09.1	bio
trim-galore (PTS, VCS, UP)	0.6.10-1	0.6.10-1	0.6.10-1			0.6.10	bio
trimage (PTS, VCS, UP)		1.0.6.16.gad74684-1	1.0.6.16.gad74684-1			1.0.6.16.gad74684	imaging
trimmomatic (PTS, VCS, UP)	0.39+dfsg-2	0.39+dfsg-2	0.39+dfsg-2			0.39	bio
trinculo (PTS, VCS, UP)	0.96+dfsg-4	0.96+dfsg-4	0.96+dfsg-4			0.96	covid-19
trinityrnaseq (PTS, VCS, UP)	2.15.2+dfsg-1	2.15.2+dfsg-2	2.15.2+dfsg-2			2.15.2	bio
trnascan-se (PTS, VCS, UP)	2.0.12+ds-1		2.0.12+ds-1				bio
tryton-modules-health (VCS, UP)					3.0.8-1		his
tvc (PTS, VCS, UP)	5.0.3+git20151221.80e144e+dfsg-5						bio
twopaco (PTS, VCS, UP)	1.0.0+dfsg-1	1.0.0+dfsg-1	1.0.0+dfsg-1			1.1.0	bio
uc-echo (PTS, VCS, UP)	1.12-19	1.12-19	1.12-19			1_12	bio
ufasta (VCS, UP)					0.0.3+git20190131.85d60d1-1		bio covid-19
ugene (PTS, VCS, UP)	51.0+dfsg-3	52.1+dfsg-1	52.1+dfsg-1			52.1	bio
umap (VCS, UP)					1.0.0-1		bio
umap-learn (PTS, VCS, UP)			0.5.9.post2+dfsg-1			0.5.9.post2	bio covid-19
umis (PTS, VCS, UP)			1.0.9-2			1.0.9	bio covid-19
unanimity (VCS, UP)					3.4.1+git20180307.02aa264+dfsg-1		bio-dev
unc-fish (VCS, UP)					1.0+dfsg-1		bio
uncalled (PTS, VCS, UP)	2.3+ds-3	2.3+ds-3	2.3+ds-3			2.3	bio covid-19
unicycler (PTS, VCS, UP)	0.5.1+dfsg-3	0.5.1+dfsg-3	0.5.1+dfsg-3			0.5.1	bio covid-19
unifrac (PTS, VCS, UP)	1.3-4	1.3-4	1.3-4			1.5.1	bio-dev
unifrac-tools (PTS, VCS, UP)	1.4-3	1.4-3	1.4-3			1.5.1	bio-dev
unikmer (PTS, VCS, UP)	0.20.0-1	0.20.0-1	0.20.0-1			0.20.0	bio
ushahidi (VCS, UP)					2.7.4-1		epi
uw-prism (VCS, UP)					1.5-2-1		oncology
vadr (VCS, UP)					1.2.1-1		covid-19
varmatch (VCS, UP)					0+git20180126.5c6fed5+dfsg-1		bio
varna (PTS, VCS, UP)	3-93+ds-7	3-93+ds-7	3-93+ds-7			3-93	bio
varscan (PTS, VCS, UP)	2.4.3+dfsg-4	2.4.3+dfsg-4	2.4.3+dfsg-4				bio covid-19
vcfanno (PTS, VCS, UP)	0.3.5+ds-2	0.3.5+ds-3	0.3.7+ds-1			0.3.7	bio
vcftools (PTS, VCS, UP)	0.1.16-3	0.1.17-1	0.1.17-1			0.1.17	bio bio-ngs cloud
vdjtools (PTS, VCS, UP)	1.2.1+git20190311+repack-2	1.2.1+git20190311+repack-2	1.2.1+git20190311+repack-2			1.2.1	bio bio-dev
velvet (PTS, VCS, UP)	1.2.10+dfsg1-9	1.2.10+dfsg1-9	1.2.10+dfsg1-9			1.2.10	bio bio-ngs cloud
velvetoptimiser (PTS, VCS, UP)	2.2.6-5	2.2.6-5	2.2.6-5			2.2.6	bio
veryfasttree (PTS, VCS, UP)	4.0.4+dfsg-2	4.0.5+dfsg-1	4.0.5+dfsg-2			4.0.5	bio bio-phylogeny cloud
vg (PTS, VCS, UP)			1.59.0+ds-0.1			1.69.0	bio covid-19
via (VCS, UP)					1.6.0-3.1		imaging imaging-dev
vienna-rna (PTS, VCS, UP)	2.6.4+dfsg-1	2.7.0+dfsg-1	2.7.0+dfsg-1			2.7.0	bio covid-19
viewmol (VCS, UP)					2.4.1-26		bio
virulencefinder (PTS, VCS, UP)	2.0.5-2	2.0.5-2	2.0.5-2			3.2.0	bio
visit (VCS, UP)					2.9.1-1		imaging
vista-foia (VCS, UP)					0.20130405-1		his
vmatch (PTS, VCS, UP)	2.3.1+dfsg-9	2.3.1+dfsg-9	2.3.1+dfsg-9			2.3.1	bio
vmd (VCS, UP)					1.9.1-3		bio
volpack (PTS, VCS, UP)	1.0b3-10	1.0b3-11	1.0b3-11			1.0b3	imaging-dev
vsearch (PTS, VCS, UP)	2.30.0-1	2.30.0-1	2.30.0-1			2.30.1	bio covid-19
vt (PTS, VCS, UP)	0.57721+ds-3	0.57721+ds-3	0.57721+ds-3			0.57721	bio covid-19
vtk-dicom (PTS, VCS, UP)	0.8.17-1	0.8.17-1	0.8.17-1			0.8.17	imaging imaging-dev
vtk9 (PTS, VCS, UP)	9.3.0+dfsg1-4	9.5.2+dfsg2-1	9.5.2+dfsg2-3			9.5.2	imaging-dev
wham-align (PTS, VCS, UP)	0.1.5-8	0.1.5-8	0.1.5-8			0.1.5	bio bio-ngs
wise (PTS, VCS, UP)	2.4.1-27	2.4.1-27	2.4.1-27			2.4.1	bio cloud
workrave (PTS, VCS, UP)	1.10.53-2	1.10.54-1	1.10.54-2			1_10_54	covid-19 tools
wtdbg2 (PTS, VCS, UP)	2.5-10	2.5-11	2.5-11			2.5	covid-19
xdffileio (PTS, VCS, UP)	0.3-4	0.3-4	0.3-4			0.No-Release	imaging-dev
xmedcon (PTS, VCS, UP)	0.25.1-gtk3+dfsg-1	0.25.1-gtk3+dfsg-1	0.25.1-gtk3+dfsg-1			0.25.3-gtk3	imaging imaging-dev
xnat (VCS, UP)					1.7.5.1-1		cms imaging
xpore (PTS, VCS, UP)	2.1-2	2.1-2	2.1-2			2.1	bio
xxsds-dynamic (PTS, VCS, UP)	1.0~alpha.1+git20210426.548c6f7-2	1.0~alpha.1+git20210426.548c6f7-2	1.0~alpha.1+git20210426.548c6f7-2			1.0~alpha.1+git20240520.0540076	bio-dev
yaha (PTS, VCS, UP)	0.1.83-3	0.1.83-3	0.1.83-3			0.1.83	bio
yanagiba (PTS, VCS, UP)	1.0.0-5	1.0.0-5	1.0.0-5			1.0.0	bio covid-19
yanosim (PTS, VCS, UP)	0.1-6	0.1-6	0.1-6			0.1	bio covid-19
zodiac-zeden (VCS, UP)					0.6.5-1		bio

Debian Med Package Thermometer