Biology development - QA

q2-sample-classifier

😟 Autoremoval

😟 CI

😟 Migration

😟 Install/upgrade

Package marked for automatic removal:

Will be removed on: 2024-06-14
Dependencies leading to autoremoval: scikit-learn
Bugs in dependencies leading to autoremoval: #1070201

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Has been trying to migrate for 83 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-feature-table

Piuparts failed:

Version: 2024.2.0-1
Sections: sid

q2cli

😟 Autoremoval

😟 CI

😟 Migration

😟 Install/upgrade

Package marked for automatic removal:

Will be removed on: 2024-06-14
Dependencies leading to autoremoval: scikit-learn
Bugs in dependencies leading to autoremoval: #1070201

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Has been trying to migrate for 83 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-feature-table

Piuparts failed:

Version: 2024.2.0-1
Sections: sid

q2-cutadapt

😟 Autoremoval

😟 CI

😟 Migration

Package marked for automatic removal:

Will be removed on: 2024-06-14
Dependencies leading to autoremoval: scikit-learn
Bugs in dependencies leading to autoremoval: #1070201

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Has been trying to migrate for 83 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

q2-emperor

😟 Autoremoval

😟 CI

😟 Migration

Package marked for automatic removal:

Will be removed on: 2024-06-14
Dependencies leading to autoremoval: scikit-learn
Bugs in dependencies leading to autoremoval: #1070201

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Has been trying to migrate for 83 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

q2-feature-table

😟 Autoremoval

😟 CI

😟 Migration

Package marked for automatic removal:

Will be removed on: 2024-06-14
Dependencies leading to autoremoval: scikit-learn
Bugs in dependencies leading to autoremoval: #1070201

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Has been trying to migrate for 83 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

q2-fragment-insertion

😟 Autoremoval

😟 CI

😟 Migration

Package marked for automatic removal:

Will be removed on: 2024-06-14
Dependencies leading to autoremoval: scikit-learn
Bugs in dependencies leading to autoremoval: #1070201

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Has been trying to migrate for 83 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

q2-phylogeny

😟 Autoremoval

😟 CI

😟 Migration

Package marked for automatic removal:

Will be removed on: 2024-06-14
Dependencies leading to autoremoval: scikit-learn
Bugs in dependencies leading to autoremoval: #1070201

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Has been trying to migrate for 83 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

q2-quality-filter

😟 Autoremoval

😟 CI

😟 Migration

Package marked for automatic removal:

Will be removed on: 2024-06-14
Dependencies leading to autoremoval: scikit-learn
Bugs in dependencies leading to autoremoval: #1070201

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Has been trying to migrate for 83 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

python-freecontact

😟 Autoremoval

😟 CI

😟 Install/upgrade

Package marked for automatic removal:

Will be removed on: 2024-06-06
Dependencies leading to autoremoval: freecontact
Bugs in dependencies leading to autoremoval: #1069552

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

Piuparts failed:

Version: 1.1-2
Sections: jessie2stretch-rcmd jessie2Xstretch-rcmd

r-bioc-cummerbund

😟 Autoremoval

😟 CI

😟 Install/upgrade

Package marked for automatic removal:

Will be removed on: 2024-06-11
Dependencies leading to autoremoval: r-cran-data.table
Bugs in dependencies leading to autoremoval: #1070009

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

Piuparts failed:

Version: 2.6.1-1
Sections: jessie-rcmd wheezy2jessie-rcmd

python-cooler

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Will be removed on: 2024-05-19
Bugs leading to autoremoval: #1069359

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

python-ete3

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Will be removed on: 2024-06-14
Dependencies leading to autoremoval: scikit-learn
Bugs in dependencies leading to autoremoval: #1070201

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

python-skbio

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Will be removed on: 2024-06-14
Dependencies leading to autoremoval: scikit-learn
Bugs in dependencies leading to autoremoval: #1070201

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

q2-alignment

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Will be removed on: 2024-06-14
Dependencies leading to autoremoval: scikit-learn
Bugs in dependencies leading to autoremoval: #1070201

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

q2-taxa

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Will be removed on: 2024-06-14
Dependencies leading to autoremoval: scikit-learn
Bugs in dependencies leading to autoremoval: #1070201

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

q2-types

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Will be removed on: 2024-06-14
Dependencies leading to autoremoval: scikit-learn
Bugs in dependencies leading to autoremoval: #1070201

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

r-bioc-gviz

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Will be removed on: 2024-06-11
Dependencies leading to autoremoval: r-cran-data.table
Bugs in dependencies leading to autoremoval: #1070009

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-mofa

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Will be removed on: 2024-06-14
Dependencies leading to autoremoval: scikit-learn
Bugs in dependencies leading to autoremoval: #1070201

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-purecn

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Will be removed on: 2024-06-11
Dependencies leading to autoremoval: r-cran-data.table
Bugs in dependencies leading to autoremoval: #1070009

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-cran-metamix

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Will be removed on: 2024-05-19
Bugs leading to autoremoval: #1069509
Dependencies leading to autoremoval: r-cran-data.table
Bugs in dependencies leading to autoremoval: #1070009

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-cran-seurat

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Will be removed on: 2024-06-03
Dependencies leading to autoremoval: r-cran-data.table r-cran-irlba
Bugs in dependencies leading to autoremoval: #1069414 #1070009

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest, autopkgtest-pkg-r

toil

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Will be removed on: 2024-06-06
Dependencies leading to autoremoval: docker.io
Bugs in dependencies leading to autoremoval: #1068755

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

freecontact

😟 Autoremoval

😟 Install/upgrade

Package marked for automatic removal:

Will be removed on: 2024-06-06
Bugs leading to autoremoval: #1069552
Will result in removal of libfreecontact-perl python-freecontact with total popcon score of 0

Piuparts failed:

Version: 1.0.21-5
Sections: jessie2Xstretch-rcmd jessie-lts2stretch jessie2stretch jessie2stretch-rcmd jessie2Xstretch

q2-metadata

😟 Autoremoval

😟 Migration

Package marked for automatic removal:

Will be removed on: 2024-06-14
Dependencies leading to autoremoval: scikit-learn
Bugs in dependencies leading to autoremoval: #1070201

Migration from unstable to testing is blocked:

Has been trying to migrate for 83 days.
Verdict: Waiting for test results, another package or too young (no action required now - check later)
Reason: autopkgtest
Migrates after: q2-quality-filter

r-cran-haplo.stats

😟 Autoremoval

😟 Install/upgrade

Package marked for automatic removal:

Will be removed on: 2024-06-11
Dependencies leading to autoremoval: r-cran-data.table
Bugs in dependencies leading to autoremoval: #1070009

Piuparts failed:

Version: 1.7.7-1
Sections: jessie2Xstretch-rcmd

libfreecontact-perl

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2024-06-06
Dependencies leading to autoremoval: freecontact
Bugs in dependencies leading to autoremoval: #1069552

r-bioc-biovizbase

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2024-06-11
Dependencies leading to autoremoval: r-cran-data.table
Bugs in dependencies leading to autoremoval: #1070009

r-bioc-geoquery

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2024-06-11
Dependencies leading to autoremoval: r-cran-data.table
Bugs in dependencies leading to autoremoval: #1070009

r-bioc-gsva

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2024-06-03
Dependencies leading to autoremoval: r-cran-irlba
Bugs in dependencies leading to autoremoval: #1069414

r-bioc-phyloseq

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2024-06-11
Dependencies leading to autoremoval: r-cran-data.table
Bugs in dependencies leading to autoremoval: #1070009

r-bioc-titancna

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2024-06-11
Dependencies leading to autoremoval: r-cran-data.table
Bugs in dependencies leading to autoremoval: #1070009

r-cran-future.batchtools

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2024-06-11
Dependencies leading to autoremoval: r-cran-data.table
Bugs in dependencies leading to autoremoval: #1070009

r-cran-gprofiler2

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2024-06-11
Dependencies leading to autoremoval: r-cran-data.table
Bugs in dependencies leading to autoremoval: #1070009

r-cran-metap

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2024-06-11
Dependencies leading to autoremoval: r-cran-data.table
Bugs in dependencies leading to autoremoval: #1070009

unifrac

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2024-06-14
Dependencies leading to autoremoval: scikit-learn
Bugs in dependencies leading to autoremoval: #1070201

python-cogent

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest, autopkgtest-pkg-python

Migration from unstable to testing is blocked:

Not in testing for 117 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: numba

Piuparts failed:

Version: 1.9-9
Sections: jessie2Xstretch-rcmd jessie-lts2stretch jessie2stretch-rcmd jessie2stretch

q2-dada2

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 37 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

Piuparts failed:

Version: 2022.11.2-2
Sections: sid-merged-usr

q2-feature-classifier

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 71 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-feature-table, q2-quality-control

Piuparts failed:

Version: 2024.2.0-1
Sections: sid

genomicsdb

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 167 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest, depends

intake

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 40 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

libbio-tools-run-alignment-tcoffee-perl

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-perl

Migration from unstable to testing is blocked:

Not in testing for 65 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

python-anndata

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 84 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: python-array-api-compat

pytorch

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 118 days.
Verdict: Maybe temporary, maybe blocked but Britney is missing information
Reason: autopkgtest, missingbuild

q2-demux

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 71 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

q2-quality-control

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 71 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-feature-table

ssm

😟 Migration

😟 Install/upgrade

😑 Tests missing

Migration from unstable to testing is blocked:

Not in testing for 41 days.
Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
Reason: build-depends, depends
Invalidated by another package
Blocked by: libccp4

Piuparts failed:

Version: None
Sections: jessie2stretch jessie2stretch-rcmd jessie2Xstretch jessie2Xstretch-rcmd

Continuous integration (CI) tests are missing.

rdkit

😟 Migration

😟 Install/upgrade

Migration from unstable to testing is blocked:

Not in testing for 37 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

Piuparts failed:

Version: 202309.3-4~exp1
Sections: experimental

bcbio

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

Migration from unstable to testing is blocked:

Not in testing for 65 days.
Verdict: Waiting for test results, another package or too young (no action required now - check later)
Reason: autopkgtest
Migrates after: freebayes

bioperl

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-perl

Piuparts failed:

Version: 1.7.1-2
Sections: jessie-lts2stretch

bioperl-run

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-perl

Piuparts failed:

Version: 1.7.1-3
Sections: jessie-lts2stretch

consensuscore

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

Piuparts failed:

Version: 1.1.1+dfsg-7
Sections: oldstable222sid

ctdconverter

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 2.0-4~bpo9+1
Sections: stretch2bpo

golang-github-biogo-hts

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-go

Piuparts failed:

Version: 1.4.4+dfsg1-1
Sections: oldstable222sid oldstable22testing

htseq

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

Piuparts failed:

Version: 0.6.1p1-4~bpo8+1
Sections: jessie2bpo

htsjdk

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 4.1.0+dfsg-1
Sections: oldstable222sid

libace-perl

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-perl

Piuparts failed:

Version: 1.92-4
Sections: jessie-lts2stretch

libgff

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 2.0.0-3
Sections: oldstable22testing oldstable222sid

librcsb-core-wrapper

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

Piuparts failed:

Version: 1.005-4
Sections: jessie2Xstretch-rcmd jessie-lts2stretch jessie2stretch jessie2stretch-rcmd

libsbml

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 5.20.2+dfsg-7
Sections: oldstable222sid

python-biopython

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 1.83+dfsg1-2
Sections: sid-broken-symlinks oldstable222sid

python-biotools

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

Piuparts failed:

Version: 1.2.12-3~bpo9+1
Sections: stretch2bpo

python-pbcore

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 1.2.7+dfsg-2~bpo8+1
Sections: jessie2bpo

python-ruffus

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest, autopkgtest-pkg-python

Piuparts failed:

Version: 2.6.3+dfsg-4~bpo8+1
Sections: jessie2bpo

qiime

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: None
Sections: jessie-lts2stretch jessie2Xstretch-rcmd jessie2Xstretch jessie2stretch-rcmd jessie2stretch

r-bioc-biocgenerics

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

Piuparts failed:

Version: 0.10.0-1
Sections: jessie-rcmd jessie

r-bioc-genomeinfodb

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

Piuparts failed:

Version: 1.0.2-2
Sections: jessie jessie-rcmd

r-bioc-iranges

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

Piuparts failed:

Version: 2.8.1-1
Sections: jessie2Xstretch-rcmd

r-cran-nmf

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

Piuparts failed:

Version: 0.20.6-1~bpo8+1
Sections: jessie2bpo

seqan2

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 2.4.0+dfsg-8~bpo8+1
Sections: jessie2bpo

snakemake

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 3.9.0+dfsg-2~bpo8+1
Sections: jessie2bpo

sra-sdk

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 3.0.3+dfsg-7
Sections: sid-broken-symlinks

libmaus2

😟 Migration

😑 Tests missing

Migration from unstable to testing is blocked:

Has been trying to migrate for 24 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest, missingbuild

Continuous integration (CI) tests are missing.

biobambam2

😟 Migration

Migration from unstable to testing is blocked:

Has been trying to migrate for 22 days.
Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
Reason: build-depends, depends
Invalidated by another package
Blocked by: libmaus2

python-loompy

😟 Migration

Migration from unstable to testing is blocked:

Not in testing for 117 days.
Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
Reason: build-depends, depends
Invalidated by another package
Blocked by: numba

biomaj3

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

cwltest

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

gatb-core

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

gffread

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

joypy

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

libbio-asn1-entrezgene-perl

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-perl

libbio-cluster-perl

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-perl

libbio-db-biofetch-perl

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

libbio-db-embl-perl

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

libbio-db-ncbihelper-perl

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

libbio-eutilities-perl

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-perl

libbio-featureio-perl

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-perl

libbio-tools-run-alignment-clustalw-perl

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-perl

libbio-variation-perl

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-perl

libgoby-java

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

libzerg-perl

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-perl

nim-hts

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

pybel

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

pyranges

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

python-airr

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

python-alignlib

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

python-bel-resources

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

python-biom-format

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest, autopkgtest-pkg-python

python-cgecore

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

python-pangolearn

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

python-parasail

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

python-pybedtools

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

python-pyflow

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

r-bioc-annotationhub

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-biostrings

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-bsgenome

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-deseq2

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-ensembldb

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-genomicalignments

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-genomicfeatures

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-genomicranges

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-rtracklayer

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-s4vectors

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-shortread

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-structuralvariantannotation

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-cran-shazam

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

ruby-crb-blast

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-ruby

ruby-rgfa

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-ruby

seqan3

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

sumalibs

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

unifrac-tools

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

networkx

😟 Migration

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: python-contextily, python-momepy

bambamc

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 0.0.50-1
Sections: jessie-lts2stretch jessie-rcmd jessie2stretch jessie2Xstretch-rcmd jessie2Xstretch jessie2stretch-rcmd

Continuous integration (CI) tests are missing.

bio-tradis

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1.3.3+dfsg-3~bpo9+1
Sections: stretch2bpo

Continuous integration (CI) tests are missing.

biojava-live

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1:1.9.7+dfsg-1
Sections: oldstable222sid

Continuous integration (CI) tests are missing.

cdk

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1:1.2.10-6
Sections: wheezy2jessie-rcmd

Continuous integration (CI) tests are missing.

gatk-native-bindings

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1.0.0+dfsg-2
Sections: oldstable22testing oldstable222sid

Continuous integration (CI) tests are missing.

hdf5

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1.8.13+docs-15+deb8u1
Sections: jessie-rcmd jessie-security wheezy2jessie-rcmd

Continuous integration (CI) tests are missing.

jebl2

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 0.1+git20230701.b3c0f25-1
Sections: oldstable222sid

Continuous integration (CI) tests are missing.

libbio-mage-utils-perl

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 20030502.0-2
Sections: jessie-lts2stretch

Continuous integration (CI) tests are missing.

libbioparser-dev

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1.2.0-2~bpo9+1
Sections: stretch2bpo

Continuous integration (CI) tests are missing.

libbpp-core

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.2.0-3
Sections: jessie2stretch jessie2stretch-rcmd jessie2Xstretch-rcmd

Continuous integration (CI) tests are missing.

libbpp-phyl

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.2.0-1
Sections: jessie2Xstretch

Continuous integration (CI) tests are missing.

libbpp-phyl-omics

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.2.0-2
Sections: jessie2Xstretch-rcmd jessie2stretch-rcmd

Continuous integration (CI) tests are missing.

libbpp-popgen

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.2.0-1
Sections: jessie2stretch-rcmd jessie2Xstretch jessie2stretch jessie2Xstretch-rcmd

Continuous integration (CI) tests are missing.

libbpp-qt

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.2.0-1~bpo8+1
Sections: jessie2bpo

Continuous integration (CI) tests are missing.

libbpp-raa

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.2.0-2~bpo8+1
Sections: jessie2bpo

Continuous integration (CI) tests are missing.

libbpp-seq

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.2.0-1
Sections: jessie-lts2stretch jessie2stretch jessie2Xstretch

Continuous integration (CI) tests are missing.

libbpp-seq-omics

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.2.0-1
Sections: jessie2Xstretch

Continuous integration (CI) tests are missing.

libchado-perl

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1.23-2
Sections: jessie wheezy2jessie-rcmd

Continuous integration (CI) tests are missing.

libdivsufsort

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.0.1-2~bpo8+1
Sections: jessie2bpo

Continuous integration (CI) tests are missing.

libgenome

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1.3.1-9
Sections: jessie2Xstretch jessie2stretch-rcmd jessie2Xstretch-rcmd jessie-lts2stretch

Continuous integration (CI) tests are missing.

libhmsbeagle

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.1.2-1
Sections: wheezy2jessie-rcmd jessie jessie2lts jessie-rcmd

Continuous integration (CI) tests are missing.

libjloda-java

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.1-2
Sections: oldstable22testing

Continuous integration (CI) tests are missing.

libmems

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1.6.0+4725-1~bpo8+1
Sections: jessie2bpo

Continuous integration (CI) tests are missing.

libmuscle

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 3.7+4565-2~bpo8+1
Sections: jessie2bpo

Continuous integration (CI) tests are missing.

libpal-java

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1.5.1-2
Sections: jessie-rcmd

Continuous integration (CI) tests are missing.

libpsortb

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1.0+dfsg-2~bpo9+1
Sections: stretch2bpo

Continuous integration (CI) tests are missing.

libpwiz

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 3.0.9393-1
Sections: jessie2Xstretch jessie2stretch-rcmd jessie2stretch jessie-lts2stretch jessie2Xstretch-rcmd

Continuous integration (CI) tests are missing.

librdp-taxonomy-tree-java

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1.2.0-6
Sections: oldstable222sid oldstable22testing

Continuous integration (CI) tests are missing.

libseqlib

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1.1.2+dfsg-1~bpo9+1
Sections: stretch2bpo

Continuous integration (CI) tests are missing.

libstatgen

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1.0.15-7
Sections: oldstable222sid

Continuous integration (CI) tests are missing.

ncbi-vdb

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.8.1+dfsg-2~bpo8+1
Sections: jessie2bpo

Continuous integration (CI) tests are missing.

openms

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: None
Sections: jessie2Xstretch-rcmd jessie-lts2stretch jessie2stretch-rcmd jessie2Xstretch jessie2stretch

Continuous integration (CI) tests are missing.

pbcopper

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.3.0+dfsg-2
Sections: oldstable222sid

Continuous integration (CI) tests are missing.

pbseqlib

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 0~20161219-1~bpo8+1
Sections: jessie2bpo

Continuous integration (CI) tests are missing.

python-cgelib

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 0.7.3-2
Sections: bookworm-rcmd bookworm

Continuous integration (CI) tests are missing.

sbmltoolbox

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 4.1.0-1
Sections: jessie-rcmd

Continuous integration (CI) tests are missing.

srf

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 0.1+dfsg-7
Sections: oldstable22testing oldstable222sid

Continuous integration (CI) tests are missing.

bamtools

😟 Install/upgrade

Piuparts failed:

Version: 2.5.2+dfsg-5
Sections: oldstable222sid

biosquid

😟 Install/upgrade

Piuparts failed:

Version: 1.9g+cvs20050121-7
Sections: jessie-lts2stretch jessie2Xstretch jessie2stretch jessie2Xstretch-rcmd

ctdopts

😟 Install/upgrade

Piuparts failed:

Version: 1.2-3~bpo9+1
Sections: stretch2bpo

cwltool

😟 Install/upgrade

Piuparts failed:

Version: 1.0.20170114120503-1~bpo8+1
Sections: jessie2bpo

fast5

😟 Install/upgrade

Piuparts failed:

Version: 0.6.5-1~bpo9+1
Sections: stretch2bpo

fermi-lite

😟 Install/upgrade

Piuparts failed:

Version: 0.1-4~bpo9+1
Sections: stretch2bpo

ffindex

😟 Install/upgrade

Piuparts failed:

Version: 0.9.9.7-3
Sections: jessie2Xstretch-rcmd jessie-lts2stretch jessie2stretch-rcmd jessie2Xstretch jessie2stretch

genometools

😟 Install/upgrade

Piuparts failed:

Version: 1.6.5+ds-2.2
Sections: oldstable222sid

htslib

😟 Install/upgrade

Piuparts failed:

Version: 1.7-2~bpo9+1
Sections: stretch2bpo

kineticstools

😟 Install/upgrade

Piuparts failed:

Version: 0.6.1+git20220223.1326a4d+dfsg-2
Sections: oldstable222sid oldstable22testing

kmer

😟 Install/upgrade

Piuparts failed:

Version: 0~20150903+r2013-8
Sections: oldstable22testing stable22sid oldstable222sid stable2sid

libai-fann-perl

😟 Install/upgrade

Piuparts failed:

Version: 0.10-3
Sections: jessie2Xstretch

libbio-graphics-perl

😟 Install/upgrade

Piuparts failed:

Version: 2.39-2
Sections: wheezy2jessie-lts

libbio-mage-perl

😟 Install/upgrade

Piuparts failed:

Version: 20030502.3-3
Sections: jessie-lts2stretch

libdisorder

😟 Install/upgrade

Piuparts failed:

Version: 0.0.2-1~bpo8+1
Sections: jessie2bpo

libedlib

😟 Install/upgrade

Piuparts failed:

Version: 1.2.3-3~bpo9+1
Sections: stretch2bpo

libfastahack

😟 Install/upgrade

Piuparts failed:

Version: 0.0+20160702-1~bpo8+1
Sections: jessie2bpo

libgo-perl

😟 Install/upgrade

Piuparts failed:

Version: 0.15-5
Sections: jessie-lts2stretch

libnhgri-blastall-perl

😟 Install/upgrade

Piuparts failed:

Version: 0.66-2
Sections: jessie-lts2stretch jessie2stretch

libpdb-redo

😟 Migration

Migration from unstable to testing is blocked:

Not in testing for 41 days.
Verdict: Waiting for test results, another package or too young (no action required now - check later)
Reason: autopkgtest
Migrates after: clipper, libccp4

librostlab

😟 Install/upgrade

Piuparts failed:

Version: 1.0.20-6
Sections: jessie2Xstretch-rcmd jessie-lts2stretch jessie2stretch-rcmd jessie2Xstretch jessie2stretch

librostlab-blast

😟 Install/upgrade

Piuparts failed:

Version: 1.0.1-7
Sections: jessie2stretch jessie2Xstretch jessie2stretch-rcmd jessie-lts2stretch jessie2Xstretch-rcmd

libsmithwaterman

😟 Install/upgrade

Piuparts failed:

Version: 0.0+git20160702.2610e25-4~bpo9+1
Sections: stretch2bpo

libsort-key-top-perl

😟 Install/upgrade

Piuparts failed:

Version: 0.08-1
Sections: jessie2Xstretch wheezy2jessie-lts

libssw

😟 Install/upgrade

Piuparts failed:

Version: 1.0-3~bpo8+1
Sections: jessie2bpo

libtabixpp

😟 Install/upgrade

Piuparts failed:

Version: 1.0.0-2~bpo8+1
Sections: jessie2bpo

libthread-pool

😟 Install/upgrade

Piuparts failed:

Version: 1.0.0-1~bpo9+1
Sections: stretch2bpo

libvcflib

😟 Install/upgrade

Piuparts failed:

Version: 1.0.0~rc1+dfsg1-6~bpo9+1
Sections: stretch2bpo

libzerg

😟 Install/upgrade

Piuparts failed:

Version: 1.0.7-8
Sections: jessie2Xstretch jessie2stretch-rcmd jessie2stretch jessie2Xstretch-rcmd jessie-lts2stretch

mcl

😟 Install/upgrade

Piuparts failed:

Version: 1:22-282+ds-2
Sections: oldstable22testing oldstable222sid

minimap2

😟 Install/upgrade

Piuparts failed:

Version: 2.15+dfsg-1~bpo9+1
Sections: stretch2bpo

ncbi-tools6

😟 Install/upgrade

Piuparts failed:

Version: 6.1.20170106-2~bpo8+1
Sections: jessie2bpo

pbbam

😟 Install/upgrade

Piuparts failed:

Version: 0.7.4+ds-1~bpo8+1
Sections: jessie2bpo

pyfai

😟 Install/upgrade

Piuparts failed:

Version: 0.15.0+dfsg1-1~bpo9+1
Sections: stretch2bpo

python-cobra

😟 Install/upgrade

Piuparts failed:

Version: 0.5.9-1
Sections: jessie2bpo2stretch

python-csb

😟 Install/upgrade

Piuparts failed:

Version: 1.2.5+dfsg-8
Sections: oldstable22testing

python-cutadapt

😟 Install/upgrade

Piuparts failed:

Version: 1.12-2~bpo8+1
Sections: jessie2bpo

python-dendropy

😟 Install/upgrade

Piuparts failed:

Version: 4.2.0+dfsg-1~bpo8+1
Sections: jessie2bpo

python-pyfaidx

😟 Install/upgrade

Piuparts failed:

Version: 0.8.1.1-2
Sections: oldstable222sid

python-pymummer

😟 Install/upgrade

Piuparts failed:

Version: 0.10.3-1~bpo9+1
Sections: stretch2bpo

python-pysam

😟 Install/upgrade

Piuparts failed:

Version: 0.9.1.4+ds-1~bpo8+1
Sections: jessie2bpo

r-bioc-affy

😟 Install/upgrade

Piuparts failed:

Version: 1.52.0-1
Sections: jessie2Xstretch-rcmd

r-bioc-altcdfenvs

😟 Install/upgrade

Piuparts failed:

Version: 2.26.0-1
Sections: jessie-rcmd

r-bioc-graph

😟 Install/upgrade

Piuparts failed:

Version: 1.52.0-1
Sections: jessie2Xstretch-rcmd

r-bioc-limma

😟 Install/upgrade

Piuparts failed:

Version: 3.30.8+dfsg-1
Sections: jessie2Xstretch-rcmd

r-bioc-snpstats

😟 Install/upgrade

Piuparts failed:

Version: 1.24.0+dfsg-1
Sections: jessie2Xstretch-rcmd

r-cran-adegenet

😟 Install/upgrade

Piuparts failed:

Version: 2.0.1-1~bpo8+1
Sections: jessie2bpo

r-cran-adephylo

😟 Install/upgrade

Piuparts failed:

Version: 1.1-10-2~bpo8+1
Sections: jessie2bpo

r-cran-boolnet

😟 Install/upgrade

Piuparts failed:

Version: 2.1.3-1
Sections: jessie2Xstretch-rcmd

r-cran-distory

😟 Install/upgrade

Piuparts failed:

Version: 1.4.2-1~bpo8+1
Sections: jessie2bpo

r-cran-dt

😟 Install/upgrade

Piuparts failed:

Version: 0.5+dfsg-1~bpo9+1
Sections: stretch2bpo

r-cran-fastcluster

😟 Install/upgrade

Piuparts failed:

Version: 1.1.22-1
Sections: jessie2Xstretch-rcmd

r-cran-genetics

😟 Install/upgrade

Piuparts failed:

Version: 1.3.8.1-1
Sections: jessie-rcmd

r-cran-phylobase

😟 Install/upgrade

Piuparts failed:

Version: 0.8.2-1~bpo8+1
Sections: jessie2bpo

r-cran-rncl

😟 Install/upgrade

Piuparts failed:

Version: 0.8.2-1~bpo8+1
Sections: jessie2bpo

r-cran-rocr

😟 Install/upgrade

Piuparts failed:

Version: 1.0-5-1
Sections: jessie-rcmd

r-cran-seqinr

😟 Install/upgrade

Piuparts failed:

Version: 3.3-3-1~bpo8+1
Sections: jessie2bpo

reprof

😟 Install/upgrade

Piuparts failed:

Version: 1.0.1-4
Sections: jessie2stretch

ruby-bio

😟 Install/upgrade

Piuparts failed:

Version: 1.5.0-2
Sections: jessie-lts2stretch jessie2Xstretch-rcmd jessie2stretch-rcmd

samtools-legacy

😟 Install/upgrade

Piuparts failed:

Version: 0.1.19-2
Sections: jessie-rcmd jessie2Xstretch-rcmd jessie

snp-sites

😟 Install/upgrade

Piuparts failed:

Version: 2.3.2-1
Sections: jessie-lts2stretch jessie2Xstretch-rcmd jessie2stretch-rcmd jessie2stretch jessie2Xstretch

spoa

😟 Install/upgrade

Piuparts failed:

Version: 1.1.3-2~bpo9+1
Sections: stretch2bpo

staden-io-lib

😟 Install/upgrade

Piuparts failed:

Version: 1.15.0-1.1
Sections: oldstable222sid

biojava4-live

😑 Tests missing

Continuous integration (CI) tests are missing.

biojava6-live

😑 Tests missing

Continuous integration (CI) tests are missing.

btllib

😑 Tests missing

Continuous integration (CI) tests are missing.

capsule-maven-nextflow

😑 Tests missing

Continuous integration (CI) tests are missing.

cthreadpool

😑 Tests missing

Continuous integration (CI) tests are missing.

gatk-bwamem

😑 Tests missing

Continuous integration (CI) tests are missing.

gatk-fermilite

😑 Tests missing

Continuous integration (CI) tests are missing.

htscodecs

😑 Tests missing

Continuous integration (CI) tests are missing.

icb-utils

😑 Tests missing

Continuous integration (CI) tests are missing.

libbiosoup-dev

😑 Tests missing

Continuous integration (CI) tests are missing.

libgkarrays

😑 Tests missing

Continuous integration (CI) tests are missing.

libqes

😑 Tests missing

Continuous integration (CI) tests are missing.

libvbz-hdf-plugin

😑 Tests missing

Continuous integration (CI) tests are missing.

libwfa2

😑 Tests missing

Continuous integration (CI) tests are missing.

milib

😑 Tests missing

Continuous integration (CI) tests are missing.

python-seqcluster

😑 Tests missing

Continuous integration (CI) tests are missing.

savvy

😑 Tests missing

Continuous integration (CI) tests are missing.

xxsds-dynamic

😑 Tests missing

Continuous integration (CI) tests are missing.

Biology development - Quality Assurance

Summary