Debian Med Project
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Summary
Practice
paquet Debian Med pour la gestion d'un cabinet

Ce méta-paquet dépend d'une collection de logiciels qui peuvent être utile pour gérer un cabinet médical.

Description

For a better overview of the project's availability as a Debian package, each head row has a color code according to this scheme:

If you discover a project which looks like a good candidate for Debian Med to you, or if you have prepared an unofficial Debian package, please do not hesitate to send a description of that project to the Debian Med mailing list

Links to other tasks

Debian Med Practice packages

Official Debian packages with high relevance

Entangle
contrôle et captures d’appareils photo numériques connectés
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uitoolkitgtk
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Entangle fournit une interface graphique pour des « prises de vue connectées », c'est-à-dire, photographier avec un appareil numérique entièrement contrôlé par ordinateur.

Trois manipulations faciles suffisent pour utiliser Entangle :

 – connecter l’appareil photo ;
 – lancer Entangle ;
 – prendre les clichés.

Avec un appareil photographique reflex mono-objectif muni de suffisamment de possibilités, Entangle permet de  :

 – ouvrir l’obturateur à partir de l’ordinateur ;
 – prévisualiser le cadre avant la prise de vue ;
 – télécharger automatiquement et afficher les photos au fur et à mesure ;
 – contrôler tous les réglages à partir de l’ordinateur.
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Freediams
assistant de prescription et gestionnaire d'interactions médicamenteuses
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Le projet FreeMedForms fournit un ensemble d'applications médicales pour aider les praticiens dans leur travail quotidien. Le projet est développé par une communauté internationale de médecins et d'informaticiens.

FreeDiams est un assistant de prescription médicamenteuse qui peut être utilisé pour créer des ordonnances complexes et rechercher des interactions médicamenteuses.

The package is enhanced by the following packages: freediams-doc-en freediams-doc-fr
Freemedforms-emr
gestionnaire de dossiers patients
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Le projet FreeMedForms fournit un ensemble d'applications médicales pour aider les praticiens dans leur travail quotidien. Le projet est développé par une communauté internationale de médecins et d'informaticiens.

L'objectif principal du gestionnaire de dossiers patients FreeMedForms est de gérer vos dossiers sur la base de votre pratique médicale ou de la pratique de groupes de recherche clinique.

The package is enhanced by the following packages: freemedforms-emr-doc-en freemedforms-emr-doc-fr
Ginkgocadx
logiciel d’imagerie médicale et visualisateur DICOM complet
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Ginkgo CADx fournit une solution de visualisation DICOM avec des capacités performantes et la prise en charge d’extensions :

 – interface simple et personnalisable à l’aide de profils ;
 – visualisation pleine de fonctionnalités d’image DICOM ;
 – ensemble d’outils complet (mesure, marquage, texte…) ;
 – prise en charge de plusieurs secteurs médicaux (neurologie, radiologie,
   dermatologie, ophtalmologie, échographie, endoscopie…) ;
 – prise en charge de la normalisation DICOM à partir de JPEG, PNG, GIF
   et TIFF ;
 – prise en charge entière de l’intégration du matériel (EMH) : flux
   produits conformes aux normes HL7 et IHE ;
 – station de travail PACS (système d'archivage et de transmission
   d'images), (C-FIND, C-MOVE, C-STORE…) ;
 – extensibilité à l’aide d’ajouts personnalisables :
   – composition mosaïquée d’image rétinienne,
   – diagnostic automatique à partir d’analyse rétinienne,
   – diagnostic automatique du psoriasis.
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Gnumed-client
medical practice management - Client
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This is the GNUmed Electronic Medical Record. Its purpose is to enable doctors to keep a medically sound record on their patients' health. It does not currently provide functionality for stock keeping. Clinical features are well-tested by real doctors in the field.

While the GNUmed team has taken the utmost care to make sure the medical records are safe at all times you still need to make sure you are taking appropriate steps to backup the medical data to a safe place at appropriate intervals. Do not forget to test your recovery procedures, too !

Protect your data! GNUmed itself comes without any warranty whatsoever. You have been warned.

This package contains the wxpython client.

The package is enhanced by the following packages: entangle gnumed-doc
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Gnumed-server
gestion de pratique médicale - serveur
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Il s'agit de l'enregistrement médical électronique GNUmed. Son objectif est de permettre aux médecins de conserver un enregistrement médical vocal de l'état de santé de leurs patients. Actuellement, il ne fournit pas de fonctionnalité de facturation et de gestion de stock. Les signes cliniques sont bien testés par de vrais médecins sur le terrain.

Alors que l'équipe GNUmed a pris le plus grand soin de s'assurer que les enregistrements médicaux sont en sûreté à chaque instant, vous devez toujours vous assurer que vous prenez des mesures appropriées pour sauvegarder les données médicales vers un endroit sûr à des intervalles adaptés. N'oubliez pas de tester également vos procédures de restauration⋅!

Protégez vos données ! GNUmed lui-même est fourni sans aucune garantie quelle qu'elle soit. Vous aurez été prévenu.

Ce paquet contient la partie serveur PostgreSQL.

Remarque⋅: Actuellement, le paquet ne construit PAS la base de données GNUmed mais installe uniquement les fichiers SQL nécessaires. Veuillez lire README.Debian.

Libchipcard-tools
outils pour accéder aux cartes à puce
Maintainer: Micha Lenk
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Libchipcard fournit une API pour l'accès aux cartes à puce. On peut citer comme exemple, les cartes mémoires, les cartes HBCI (banque à domicile), les GeldKarte allemandes (porte-monnaie électroniques) et les cartes KVK (cartes d'assurance maladie).

Ce paquet fournit des outils pour cartes à puce, par exemple des porte-monnaie électroniques.

Orthanc
Lightweight, RESTful DICOM server for medical imaging
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Orthanc aims at providing a simple, yet powerful DICOM server for medical imaging. Orthanc can turn any computer running Windows or Linux into a Vendor Neutral Archive (in other words, a mini-PACS system). Its architecture is lightweight, meaning that no complex database administration is required, nor the installation of third-party dependencies.

What makes Orthanc unique is the fact that it provides a RESTful API. Thanks to this major feature, it is possible to drive Orthanc from any computer language. The DICOM tags of the stored medical images can be downloaded in the JSON file format. Furthermore, standard PNG images can be generated on-the-fly from the DICOM instances by Orthanc.

Orthanc lets its users focus on the content of the DICOM files, hiding the complexity of the DICOM format and of the DICOM protocol.

Please cite: S. Jodogne, C. Bernard, M. Devillers, E. Lenaerts and P. Coucke: Orthanc -- A Lightweight, RESTful DICOM Server for Healthcare and Medical Research (2013)
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Orthanc-wsi
Whole-slide imaging support for Orthanc (digital pathology)
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Orthanc-WSI brings support of whole-slide imaging for digital pathology into Orthanc, the lightweight, RESTful Vendor Neutral Archive for medical imaging.

This package contains two command-line tools to convert whole-slide images to and from DICOM. Support for proprietary file formats is available through OpenSlide. The package also contains an Orthanc plugin to display such DICOM images by any standard Web browser. The implementation follows DICOM Supplement 145.

Please cite: S. Jodogne, E. Lenaerts, L. Marquet, C. Erpicum, R. Greimers, P. Gillet, R. Hustinx and P. Delvenne: Open Implementation of DICOM for Whole-Slide Microscopic Imaging (2017)
Qrisk2
calculateur de risque de maladies cardiovasculaires
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Ce calculateur peut être utilisé pour déterminer le risque d’attaque cardiaque ou d’accident vasculaire cérébral dans les dix prochaines années, en répondant à quelques questions simples. Il est indiqué pour les personnes n’ayant pas déjà eu de diagnostic de cardiopathies ou d’AVC.

L’algorithme QRISK®2 a été développé par des docteurs et universitaires du NHS (système de la santé publique du Royaume-Uni), et est basé sur des données collectées systématiquement par plusieurs milliers de médecins traitants de tout le royaume ayant contribué librement aux données de recherche médicale.

Même si QRISK2 a été développé pour un emploi au Royaume-Uni, il est utilisé partout. Pour un usage hors de cette région, si le champ du code postal est laissé vide, le résultat sera calculé en utilisant une valeur moyenne. Les utilisateurs doivent noter que les risques sont probablement sous-estimés dans les régions défavorisées et surestimés dans les régions prospères. Toutes les décisions médicales doivent être prises par le patient après une consultation médicale. Les auteurs rejettent toute responsabilité dans la bonne ou mauvaise utilisation clinique de ce résultat.

Please cite: Julia Hippisley-Cox, Carol Coupland, Yana Vinogradova, John Robson, Rubin Minhas, Aziz Sheikh and Peter Brindle: Predicting cardiovascular risk in England and Wales: prospective derivation and validation of QRISK2. (PubMed,eprint) British Medical Journal 336(7659):1475-82 (2008)
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R-cran-medadherence
GNU R Medication Adherence: Commonly Used Definitions
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Adherence is defined as "the extent to which a person's behavior coincides with medical or health advice", which is very important, for both clinical researchers and physicians, to identify the treatment effect of a specific medication(s).

A variety of measures have been developed to calculate the medication adherence. Definitions and methods to address adherence differ greatly in public literature. Choosing which definition should be determined by overall study goals. This package provides the functions to calculate medication adherence based on commonly used definitions.

Sleepyhead
logiciel de suivi de sommeil avec un focus sur le traitement de surveillance CPAP
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SleepyHead est un logiciel libre et multi-plateforme de recherche pour examiner les données produites par les machines CPAP (Continuous Positive Airway Pressure – ventilation en pression positive continue) et les équipements afférents, utilisés dans le traitement du syndrome d'apnées du sommeil ou d’autres troubles du sommeil.

SleepyHead gère les données de machines compatibles CPA des modèles suivants :

 – ResMed S9 ;
 – AirSense 10 ;
 – AirCurve 10 ;
 – Philips Respironics System One ;
 – Fisher & Paykel ICON & ICON+ ;
 – DeVilbiss IntelliPAP.

Ce logiciel prend en charge la série complète des oxymètres CMS50 de Contec, soit seuls ou synchronisés avec des données CPAP (bien qu’il soit nécessaire d’installer un pilote séparé pour les équipements de contact). Il prend en charge les attachements d’oxymètres de ResMed et PR System One et l’importation de fichiers à partir d’oxymètres MD300W1 de ChoiceMMed.

Official Debian packages with lower relevance

Libctapimkt1
Read German Krankenversichertenkarte and eGK
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roleshared-lib
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Library and program to read the German health insurance card (KVK) and the German electronic health card (eGK) from a certified card reading device on the serial port in Linux with kernel 2.6.x.

Packaging has started and developers might try the packaging code in VCS

Openemr
Comprehensive medical practice management
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Version: 4.2.2+dfsg-1

OpenEMR is a free medical practice management, electronic medical records, prescription writing, and medical billing application. These programs are also referred to as electronic health records. It is a free open source replacement for medical applications such as Medical Manager, Health Pro, and Misys. It features support for EDI billing to clearing houses such as MedAvant and ZirMED using ANSI X12. Medical claim and accounts receivable are accomplished through SQL-Ledger, which has been customized. Calendar features include categories for appointment types, colors associated with appointment types, repeating appointments, and the ability to restrict appointments based on type. There are customizable medical encounter forms, support for voice recognition software, and electronic or scanned digital document management for records.

The community is dedicated to guarding OpenEMR's status as a free, open source software solution for medical practices. Its members are comprised of software developers, as well as physicians and those with extensive medical and billing knowledge, all with the common goal of making OpenEMR a viable alternative to its proprietary counterparts.

The OpenEMR community strives to work together to create a high-quality electronic medical record and practice management system. Through open collaboration, the community is molding a stable, yet continuously improving product, thanks to the efforts of developers across the globe, brought together by their tenacity and the connectivity of the Internet.

Thera-pi
organization and management of outpatient clinics and rehabilitation-medicine companies
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Version: 0.0.0.20130429-1

This project targets at the German health care system.

Unofficial packages built by somebody else

Elementalclinic
Electronical Medical Health record system for mental health
Responsible: Hans Dieter Pearcey
License: GPL2+

Elemental Clinic is medical records management system for mental health professionals.

  • Implement an affordable web-based alternative to paper records keeping
  • Train and support clinicians to get the most from your EMR
  • Customize software to fit unique practice needs
Freemed
Electronic Medical Record and Practice Management system
License: GPL

Electronic Medical Record and Practice Management system for medical providers that runs in any web browser in multiple languages. It provides an XML-RPC backend and multiple import and export formats, as well as reporting and other features.

Freeshim
opensource electronic medical device interface
License: unknown

FreeSHIM is an opensource electronic medical device interface, which aims to allow any EMR/PM system to talk to any medical device attached to a workstation without having to install tons of pesky drivers or “reinvent the wheel” for each additional device manufacturer.

Remark of Debian Med team: Needs Java prerequisites

Missing Java prerequisites in Debian:

  • org.hsqldb:hsqldb:2.0.0
  • org.reflections:reflections:0.9.5-RC2
Tinyheb
billing system for midwives
License: GPL

This billing system enables midwives to exchange data with health insurances in Germany (compliant to §302 SGB V).

No known packages available but some record of interest (WNPP bug)

Elexis - wnpp
medical practice managemant system for use in Switzerland
Responsible: Niklaus Giger
License: Eclipse Public License
Debian package not available
Language: Java (Eclipse Rich Client Platform)

An Eclipse RCP program for all aspects of a medical practice: electronic medical record (EMR), laboratory findings etc., as well as accounting, billing (swiss TARMED-System, other systems to be developped) and other daily work.

Openrep - wnpp
software for homeopathic repertorization and viewing materia medicae
Responsible: Y Giridhar Appaji Nag
License: GPLv3 or later
Debian package not available

OpenRep is a Java desktop application designed to serve as a homeopathic software with capabilities to open and use multiple repertories, perform repertorizations and view its results, manage patients and view different materia medicae. It is also designed to save and load data in human readable xml format.

Remark of Debian Med team: scientific use?

Please read the thread about homeopathic software on the Debian Med mailing list starting at http://lists.debian.org/debian-med/2009/06/msg00028.html .

No known packages available

Clearhealth
Medical practice management system
License: GPL
Debian package not available

ClearHealth is a Ppractice Management System to address the big five features: Medical Billing, Medical Accounts Recievable, Scheduling, Access Control, and EMR.

Freeb
Medical Bill formating module
License: GPL
Debian package not available

FreeB is Medical Bill formating module. It is designed to be used with any EHR system that tracks basic demographics, procedure codes and diagnosis codes. An EHR sends the basic billing data to FreeB using a simple XML-based interface (XML-RPC or SOAP as needed). FreeB then handles the bill formating and bill revision. FreeB has standard templates for X12 837, HFCA 1500 (now the NPI modified CMS-1500) and UB-92 series formats. FreeB is designed so that it can send bills to a printer, to a payers web interface, or to a clearinghouse. FreeB also performs bill revision, as you modify the claim data in order to meet the payor requirements, FreeB keeps track of those changes over time so that you can easily see the progression of the claim over time. The current version of FreeB is written in PHP and uses the Smarty template language for bill templates. FreeB has a web interface that allows users to modify any aspect of a claim, and send groups of claims in different directions.

FreeB 1.0 (Perl) is still used by the OpenEMR project. FreeB 1.0 was rewritten as REMITT which used by the FreeMED project.

Medintux
Medical practice management system
License: CeCILL (free)
Debian package not available

MedinTux is a powerful medical software, multiuser (using MySQL for data storage), easy-to-use, complete, working from the GP to the hospital.

Help wanted: Unfortunately, MedinTux is written in french, closing its use to many countries in the world. Help is wanted to translate

  • The GUI (directly in the source code, which will be reverse translated later to french, using Qt Linguist)
  • The documentation and installation instructions

Any person with real french to english skill is wellcome. Please, contact Gérard Delafond : gerard-at-delafond.org

Mirrormed
EHR and practice management system
License: GPL
Debian package not available

MirrorMed is a free and open source EHR and practice management system written in PHP. MirrorMed is a web-based application that is capable of running a healthcare practice. MirrorMed shares code with FreeMED, and OpenEMR. MirrorMed is primarily sponsored by SynSeer.

Mirth
HL7 integration engine
License: MPL 1.1
Debian package not available

"Swiss army knife" HL7 integration engine. Specifically designed for HL7 message integration, Mirth provides the necessary tools for developing, deploying, and monitoring interfaces.

Filtering can be performed on incoming messages using the default message filters that are included with Mirth, or your own custom filtering scripts. Mirth's web interface makes it easy to write new scripts by proving a template and editing field that allows you to validate your script code. Mirth also supports filters written in Java if you require more complex filtering options.

Openpms
medical billing, scheduling, and account management system
License: GPL
Debian package not available

HIPAA compliant medical billing, scheduling, and account management system. Integrated with x12 standard electronic transactions, OpenBilling XML standards, and hcfa-1500 legacy support. Complete cross platform performance with java 2 standards.

Remark of Debian Med team: Status of this software

This project has not issued any release since March 2004 and thus might be considered dead. There are some chances to cherry pick some code from SourceForge repository.

Proteus
clinical decision support guidelines model
License: EPL
Debian package not available

Proteus is a software technology that allows creating clinical executable decision support guidelines with little effort. Once a guideline for a condition has been created, it can be executed to provide stepwise advice for any patient having that condition.

Remitt
preparing and submitting medical billing data
License: GPL
Debian package not available

Medical information translation and transmission system, which is primarily used for preparing and submitting medical billing data.

REMITT works independent of any specific electronic medical record (EMR) or practice management (PM) system, and can interface with any EMR or PM system which implements its application programming interface (API). The first system to do so has been FreeMED.

Resmedicinae
comprising software solution for use in medicine
License: GPL:
Debian package not available

Res Medicinae is to become a comprising software solution for use in Medicine which combines intuitive ease of use with great flexibility, reached through the usage of CYBOP technology. It wants to adhere to common standards for medical software, wherever useful, and will thus be open to other systems. Using the CYBOL language, users are enabled to, themselves, modify applications.

Res Medicinae is the attempt to overcome high pricing in the realm of Medical Information Systems and to provide users with a free, stable, secure, platform-independent, extensive system.

This project does not provide a complete solution for medical practice. It will take another couple of years before being so far.

Sqlclinic
intranet solution for Saint Vincents Catholic Medical Centers of New York
License: GPL
Debian package not available

This is a complete clinical and administrative application for providers of psychiatric housing, although the software is designed to accommodate an entire Community Mental Health Care Center (CMHC) or private practitioners (both clinical social workers and psychiatrists) working in behavioral health. Technical support is free via mailing lists. Support contracts are available from Saint Vincent Catholic Medical Centers of New York.

Features:

  • Administrative Tools
  • Built In DBA Utilities
  • Complete Clinical Chart
  • Email Alerts, Reports and Reminders
  • Intake and Placement Tracking
  • Integrated DSM IV
  • Quality Assurance Instruments
  • Purchase Orders
  • Unit (Shift) Logs
  • Work Orders
*Popularitycontest results: number of people who use this package regularly (number of people who upgraded this package recently) out of 201342