Debian Med Project
Help us to see Debian used by medical practitioners and biomedical researchers! Join us on the Salsa page.
Summary
A Debian Pure Blend is a Debian internal project which assembles a set of packages that might help users to solve certain tasks of their work. The list on the right shows the tasks of debian-med.
Links
Debian Med
Ubuntu Thermometer
Tasks of Debian Med
Package list
Bugs of Debian Med
Color legend
Up to date
Debian stable behind unstable
Ubuntu behind Debian unstable
Waiting in NEW
Not packaged
Obsolete
Upstream behind unstable
Unstable fits upstream
Unstable behind upstream

Debian Med Package Thermometer
Package stabletestingunstablestable-bpoexperimentalNEWUNRELEASEDupstreamtasks
abacas (PTS, VCS, UP) 1.3.1-91.3.1-91.3.1-91.3.1covid-19 bio
abpoa (PTS, VCS, UP) 1.4.1-31.5.3-11.5.3-11.5.3bio bio-dev
abyss (PTS, VCS, UP) 2.3.5+dfsg-22.3.10-12.3.10-12.3.10covid-19 cloud bio
acacia (VCS, UP) 1.53-0biolinux3bio
acedb (PTS, VCS, UP) 4.9.39+dfsg.02-74.9.39+dfsg.02-94.9.39cloud bio
adapterremoval (PTS, VCS, UP) 2.3.3-22.3.4-12.3.4-12.3.4bio
adun.app (PTS, VCS, UP) 0.81-140.81-150.81-150.No-Sitebio
aegean (PTS, VCS, UP) 0.16.0+dfsg-20.16.0+dfsg-40.16.0+dfsg-40.16.0bio
aevol (PTS, VCS, UP) 5.0+ds-35.0+ds-45.0+ds-45.0cloud bio
agat (VCS, UP) 0.5.0-1bio
aghermann (PTS, VCS, UP) 1.1.2-31.1.2-51.1.2-51.1.2rehabilitation
alien-hunter (PTS, VCS, UP) 1.7-101.7-101.7-100.No-Releasecloud bio
allelecount (PTS, VCS, UP) 4.3.0-24.3.0-34.3.0-34.3.0covid-19
alter-sequence-alignment (PTS, VCS, UP) 1.3.4-61.3.4-81.3.4-81.3.4bio
altree (PTS, VCS, UP) 1.3.2-11.3.2-21.3.2-2bio-phylogeny bio cloud
amap-align (PTS, VCS, UP) 2.2+git20080214.600fc29+dfsg-22.2+git20080214.600fc29+dfsg-22.2+git20080214.600fc29+dfsg-22.2+git20080214.600fc29cloud bio
amide (PTS, VCS, UP) 1.0.6-11.0.6-51.0.6-51.0.6imaging
amos (VCS, UP) 3.1.0-1bio
ampliconnoise (PTS, VCS, UP) 1.29-101.29-151.29-151.29cloud bio
andi (PTS, VCS, UP) 0.14-20.14-30.14-30.14bio
anfo (PTS, VCS, UP) 0.98-90.No-Trackbio cloud
ants (PTS, VCS, UP) 2.5.4+dfsg-12.5.4+dfsg-12.5.4imaging
any2fasta (PTS, VCS, UP) 0.4.2-20.4.2-20.4.2-20.4.2bio
apollo (VCS, UP) 2.3.1-1bio
aragorn (PTS, VCS, UP) 1.2.38-41.2.41-31.2.41-31.2.41cloud bio
arb (PTS, VCS, UP) 6.0.6-56.0.6-86.0.6-87.0bio
arden (PTS, VCS, UP) 1.0-51.0-61.0-60.No-Releasecloud bio
ariba (PTS, VCS, UP) 2.14.6+ds-52.14.7+ds-72.14.7+ds-72.14.7bio
art-nextgen-simulation-tools (PTS, VCS, UP) 20160605+dfsg-420160605+dfsg-520160605+dfsg-5bio
artemis (PTS, VCS, UP) 18.2.0+dfsg-318.2.0+dfsg-418.2.0+dfsg-418.2.0bio
artfastqgenerator (PTS, VCS, UP) 0.0.20150519-40.0.20150519-50.0.20150519-50.0.20150519bio
arvados (VCS, UP) 2.0.3-1bio covid-19
assembly-stats (PTS, VCS, UP) 1.0.1+ds-61.0.1+ds-61.0.1+ds-61.0.1bio covid-19
assemblytics (PTS, VCS, UP) 1.2.1+dfsg-11.2.1+dfsg-21.2.1+dfsg-21.2.1bio
ataqv (PTS, VCS, UP) 1.3.0+ds-21.3.1+ds-21.3.1+ds-21.3.1bio
atropos (PTS, VCS, UP) 1.1.31+dfsg-31.1.32+dfsg-21.1.32+dfsg-21.1.32bio
augur (PTS, VCS, UP) 20.0.0-124.4.0-124.4.0-129.0.0covid-19 bio
augustus (PTS, VCS, UP) 3.5.0+dfsg-23.5.0+dfsg-43.5.0+dfsg-43.5.0bio
auspice (VCS, UP) 2.10.0-1covid-19
autodock-vina (PTS, VCS, UP) 1.2.3-21.2.5-21.2.7-11.2.7cloud bio
autodocksuite (PTS, VCS, UP) 4.2.6-94.2.6-94.2.6-94.2.6cloud bio
avogadro (PTS, VCS, UP) 1.97.0-11.100.0-21.100.0-21.100.0bio
axe-demultiplexer (PTS, VCS, UP) 0.3.3+dfsg-30.3.3+dfsg-40.3.3+dfsg-40.3.3bio
axparafit (VCS, UP) 1.0-1bio
axpcoords (VCS, UP) 1.0-1bio
bagpipe (VCS, UP) 2012.02.15-1cloud bio
baitfisher (PTS, VCS, UP) 1.2.7+git20211020.de26d5c+dfsg-11.2.7+git20211020.de26d5c+dfsg-21.2.7+git20211020.de26d5c+dfsg-21.2.7+git20211020.de26d5cbio
bali-phy (PTS, VCS, UP) 3.6.1+dfsg-13.6.1+dfsg-34.0-14.0~beta16+dfsg-14.0-alpha-16.3bio
ball (PTS, VCS, UP) 1.5.0+git20180813.37fc53c-111.5.0+git20180813.37fc53c-111.5.0+git20220524.d85d2ddbio
bambamc (PTS, VCS, UP) 0.0.50-60.0.50-60.0.50-60.0.50bio-dev
bamclipper (PTS, VCS, UP) 1.0.0-31.0.0-31.0.0-31.0.0covid-19 bio
bamkit (PTS, VCS, UP) 0.0.1+git20170413.ccd079d-30.0.1+git20170413.ccd079d-30.0.1+git20170413.ccd079d-30.0.1+git20170413.ccd079dbio covid-19
bamtools (PTS, VCS, UP) 2.5.2+dfsg-42.5.2+dfsg-62.5.2+dfsg-62.5.2bio cloud bio-dev
bandage (PTS, VCS, UP) 0.9.0-20.9.0-20.9.0-20.9.0bio
barrnap (PTS, VCS, UP) 0.9+dfsg-30.9+dfsg-40.9+dfsg-40.9bio
bart (PTS, VCS, UP) 0.8.00-30.9.00-30.9.00-30.9.00imaging-dev imaging
bart-cuda (PTS, VCS, UP) 0.8.00-20.8.00-20.9.00imaging
bart-view (PTS, VCS, UP) 0.2.00-10.3.00-10.3.00-10.3.00imaging
bax2bam (VCS, UP) 0.0.9-1bio
bbhash (PTS, VCS, UP) 1.0.0-51.0.0-61.0.0-61.0.0covid-19 bio-dev
bbmap (PTS, VCS, UP) 39.01+dfsg-239.15+dfsg-139.18+dfsg-139.18covid-19 bio
bcalm (PTS, VCS, UP) 2.2.3-42.2.3-52.2.3-52.2.3bio covid-19
bcbio (PTS, VCS, UP) 1.2.9-21.2.9-31.2.9bio covid-19 bio-dev
bcftools (PTS, VCS, UP) 1.16-11.21-11.21-11.21bio-ngs bio covid-19
beads (PTS, VCS, UP) 1.1.22-11.1.22-11.1.22-1bio
beagle (PTS, VCS, UP) 220722-1241217-3241217-3250227bio
beast-mcmc (PTS, VCS, UP) 1.10.4+dfsg-51.10.4+dfsg-61.10.4+dfsg-61.10.4bio bio-phylogeny
beast2-mcmc (PTS, VCS, UP) 2.7.3+dfsg-12.7.6+dfsg-12.7.6+dfsg-12.7.7bio
bedops (PTS, VCS, UP) 2.4.41+dfsg-12.4.41+dfsg-32.4.41+dfsg-32.4.41bio
bedtools (PTS, VCS, UP) 2.30.0+dfsg-32.31.1+dfsg-22.31.1+dfsg-22.31.1cloud bio-ngs bio covid-19
berkeley-express (PTS, VCS, UP) 1.5.3+dfsg-31.5.3+dfsg-31.5.3+dfsg-31.5.3bio
biber (PTS, VCS, UP) 2.18-12.20-22.20-22.20typesetting
biceps (VCS, UP) 0.0.201401-1bio
bifrost (PTS, VCS, UP) 1.3.1-11.3.1-11.3.5bio-dev bio
bigsdb (VCS, UP) 1.18.1-1bio
bio-eagle (PTS, VCS, UP) 2.4.1-32.4.1-32.4.1-32.4.1bio
bio-formats (VCS, UP) 6.0.1+dfsg-1imaging-dev
bio-rainbow (PTS, VCS, UP) 2.0.4+dfsg-22.0.4+dfsg-22.0.4+dfsg-22.0.4bio
bio-tradis (PTS, VCS, UP) 1.4.5+dfsg2-11.4.5+dfsg2-21.4.5+dfsg2-21.4.5bio bio-dev
bio-vcf (PTS, VCS, UP) 0.9.5-30.9.5-30.9.5-30.9.5bio
bioawk (PTS, VCS, UP) 1.0-4+deb12u11.0-51.0-51.0bio
biobambam2 (PTS, VCS, UP) 2.0.185+ds-12.0.185+ds-22.0.185+ds-22.0.185-release-20221211202123bio covid-19 bio-dev
bioimagesuite (VCS, UP) 2.0-1imaging
bioimagexd (VCS, UP) 1.0-r1799-1imaging
biojava-live (PTS, VCS, UP) 1.9.5+dfsg-31.9.7+dfsg-21.9.7+dfsg-21.9.7bio-dev
biojava4-live (PTS, VCS, UP) 4.2.12+dfsg-84.2.12+dfsg-84.2.12+dfsg-84.2.12bio-dev
biojava6-live (PTS, VCS, UP) 6.1.0+dfsg-46.1.0+dfsg-56.1.0+dfsg-56.1.0bio-dev
biomaj3 (PTS, VCS, UP) 3.1.23-13.1.24-23.1.24-23.1.24bio-dev
biomaj3-cli (PTS, VCS, UP) 3.1.11-43.1.11-53.1.11-53.1.11cloud
biomaj3-daemon (PTS, VCS, UP) 3.0.24-23.0.24-33.0.24-33.0.24bio
bioperl (PTS, VCS, UP) 1.7.8-11.7.8-11.7.8-11.7.8bio-dev cloud
bioperl-run (PTS, VCS, UP) 1.7.3-91.7.3-131.7.3-131.7.3cloud bio-dev
biosig (PTS, VCS, UP) 2.5.0-12.6.1-12.6.1-12.6.1imaging physics imaging-dev
biosquid (PTS, VCS, UP) 1.9g+cvs20050121-121.9g+cvs20050121-15.11.9g+cvs20050121-15.11.9gbio-dev cloud
biosyntax (PTS, VCS, UP) 1.0.0b-41.0.0b-61.0.0b-61.0.0bio
bioxtasraw (PTS, VCS, UP) 2.1.1-42.3.0-22.3.0imaging-dev psychology bio
bismark (VCS, UP) 0.22.3-1bio
bitseq (PTS, VCS, UP) 0.7.5+dfsg-60.7.5+dfsg-60.7.5+dfsg-60.7.5bio
blasr (PTS, VCS, UP) 5.3.5+dfsg-65.3.5+dfsg-75.3.5+dfsg-70.No-Sitebio bio-ngs
blat (VCS, UP) 35-1covid-19 bio
blimps (PTS, VCS, UP) 3.9+ds-13.9+ds-43.9+ds-43.9bio
blobology (VCS, UP) 0.0+20151216-1bio
bmtk (PTS, VCS, UP) 1.0.6+ds-11.1.1+ds-41.1.1+ds-41.1.1psychology
bolt-lmm (PTS, VCS, UP) 2.4.0+dfsg-12.4.1+dfsg-22.4.1+dfsg-22.4.1bio
bowtie (PTS, VCS, UP) 1.3.1-11.3.1-31.3.1-31.3.1bio-ngs bio cloud
bowtie2 (PTS, VCS, UP) 2.5.0-32.5.4-12.5.4-12.5.4bio covid-19 cloud
boxshade (PTS, VCS, UP) 3.3.1-143.3.1-143.3.1-140.No-Releasecloud bio
bppphyview (PTS, VCS, UP) 0.6.1-40.6.1-50.6.1-50.6.1bio
bppsuite (PTS, VCS, UP) 2.4.1-62.4.1-72.4.1-72.4.1bio
braker (VCS, UP) 2.1.2+dfsg-1bio
brian (PTS, VCS, UP) 2.5.1-32.8.0.4-12.8.0.4-12.8.0.4imaging-dev
brig (PTS, VCS, UP) 0.95+dfsg-30.95+dfsg-30.95+dfsg-30.95bio
btllib (PTS, VCS, UP) 1.4.10+dfsg-11.4.10+dfsg-11.4.10+dfsg-11.7.5bio-dev bio
busco (PTS, VCS, UP) 5.4.4-15.5.0-35.5.0-3covid-19 bio
bustools (PTS, VCS, UP) 0.42.0+dfsg-10.43.2+dfsg-10.43.2+dfsg-10.44.1covid-19 bio
bwa (PTS, VCS, UP) 0.7.17-70.7.18-10.7.18-10.7.18covid-19 bio bio-ngs cloud
camitk (PTS, VCS, UP) 5.2.0-2imaging imaging-dev
camp (PTS, VCS, UP) 0.8.4-40.8.4-4.10.8.4-4.10.8.4imaging-dev
canu (PTS, VCS, UP) 2.0+dfsg-22.2+dfsg-52.3bio
capsule-maven-nextflow (PTS, VCS, UP) 1.0.3.1+dfsg-51.0.3.1+dfsg-51.0.3.1+dfsg-51.0.3.1bio-dev
capsule-nextflow (PTS, VCS, UP) 1.1.1+dfsg-11.1.1+dfsg-11.1.1+dfsg-11.1.1bio-dev
card-rgi (VCS, UP) 4.2.2-1bio
care2x (VCS, UP) 2.5~rc2-1his
cassiopee (PTS, VCS, UP) 1.0.9-31.0.9-41.0.9-41.0.9cloud bio
cat-bat (PTS, VCS, UP) 5.2.3-25.3-25.3-26.0.1covid-19 bio
catfishq (PTS, VCS, UP) 1.4.0+ds-11.4.0+ds-11.4.0+ds-11.4.0bio
cct (PTS, VCS, UP) 1.0.3-11.0.3-11.0.3-11.0.3bio
cd-hit (PTS, VCS, UP) 4.8.1-44.8.1-44.8.1-44.8.1bio cloud
cdbfasta (PTS, VCS, UP) 1.00+git20181005.014498c+dfsg-41.00+git20230710.da8f5ba+dfsg-11.00+git20230710.da8f5ba+dfsg-11.00+git20230710.da8f5bacloud bio
cdk (PTS, VCS, UP) 2.8-22.10-12.10-12.10bio-dev
cellprofiler (VCS, UP) 3.0.0-1imaging bio
centrifuge (PTS, VCS, UP) 1.0.3-111.0.4.2-11.0.4.2-11.0.4.2bio covid-19
cgview (PTS, VCS, UP) 0.0.20100111-70.0.20100111-70.0.20100111-70.No-Releasebio
changeo (PTS, VCS, UP) 1.3.0-11.3.0-31.3.0-31.3.0bio covid-19
chemtool (PTS, VCS, UP) 1.6.14-61.6.14-61.6.14-61.6.14pharmacy
chime (VCS, UP) 0.2.1-1epi covid-19
chip-seq (PTS, VCS, UP) 1.5.5-31.5.5-31.5.5-31.5.5covid-19
chromhmm (PTS, VCS, UP) 1.24+dfsg-11.26+dfsg-31.26+dfsg-31.26bio
chromimpute (PTS, VCS, UP) 1.0.3+dfsg-41.0.3+dfsg-51.0.3+dfsg-51.0.3bio
cif-tools (PTS, VCS, UP) 1.0.7-11.0.12-41.0.12-41.0.12bio
ciftilib (PTS, VCS, UP) 1.6.0-21.6.0-2.11.6.0-2.11.6.0imaging-dev
cimg (PTS, VCS, UP) 3.2.1+dfsg-13.5.2+dfsg-13.5.2+dfsg-13.5.2imaging-dev
cinema (VCS, UP) 3.0.23-1bio
circlator (PTS, VCS, UP) 1.5.6-71.5.6-131.5.5bio
circos (PTS, VCS, UP) 0.69.9+dfsg-20.69.9+dfsg-20.69.9+dfsg-2cloud bio
clearcut (PTS, VCS, UP) 1.0.9+git20211013.b799afe-11.0.9+git20211013.b799afe-11.0.9+git20211013.b799afe-11.0.9+git20211013.b799afebio cloud
clonalframe (PTS, VCS, UP) 1.2-111.2-111.2-111.2bio cloud
clonalframeml (PTS, VCS, UP) 1.12-31.13-11.13-11.13covid-19 bio
clonalorigin (PTS, VCS, UP) 1.0-61.0-81.0-81.0bio
clustalo (PTS, VCS, UP) 1.2.4-71.2.4-81.2.4-81.2.4bio cloud
clustalw (PTS, VCS, UP) 2.1+lgpl-72.1+lgpl-72.1+lgpl-72.1cloud bio bio-phylogeny
clustalx (PTS, VCS, UP) 2.1+lgpl-92.1+lgpl-92.1+lgpl-92.1bio bio-phylogeny
cluster3 (PTS, VCS, UP) 1.59+ds-5bio
cmtk (PTS, VCS, UP) 3.3.1p2+dfsg-23.3.1p2+dfsg-33.3.1p2+dfsg-33.4.0imaging
cnvkit (PTS, VCS, UP) 0.9.9-20.9.12-10.9.12-10.9.12bio
codonw (PTS, VCS, UP) 1.4.4-71.4.4-81.4.4-81.4.4bio
coils (PTS, VCS, UP) 2002-92002-92002-90.No-Releasebio cloud
comet-ms (PTS, VCS, UP) 2019015+cleaned1-32019015+cleaned1-4.12019015+cleaned1-4.12021010bio
compclust (VCS, UP) 1.3+dfsg-1bio-dev
concavity (PTS, VCS, UP) 0.1+dfsg.1-50.1+dfsg.1-60.1+dfsg.1-60.No-Releasecloud bio
concurrentqueue (PTS, VCS, UP) 1.0.3+ds-11.0.4+ds-21.0.4+ds-21.0.4bio-dev
conda-package-handling (PTS, VCS, UP) 2.0.1-22.3.0-12.3.0-12.4.0bio bio-dev
conda-package-streaming (PTS, VCS, UP) 0.7.0-40.10.0-10.10.0-10.11.0bio-dev
condetri (VCS, UP) 2.3-1bio
consensuscore (PTS, VCS, UP) 1.1.1+dfsg-41.1.1+dfsg-7.11.1.1+dfsg-7.10.No-Releasebio-dev
consensuscore2 (VCS, UP) 0.13.0+20160719-2bio-dev
conservation-code (PTS, VCS, UP) 20110309.0-820110309.0-820110309.0-80.No-Releasecloud bio
contrafold (VCS, UP) 2.02-1bio
coot (PTS, VCS, UP) 1.1.09+dfsg-41.1.13bio
covpipe (VCS, UP) 3.0.6-1bio covid-19
covtobed (PTS, VCS, UP) 1.3.5+dfsg-11.3.5+dfsg-21.3.5+dfsg-21.3.5bio
crac (PTS, VCS, UP) 2.5.2+dfsg-52.5.2+dfsg-62.5.2+dfsg-6bio
crea (VCS, UP) 0.0.20131107-1imaging
cronometer (PTS, VCS, UP) 0.9.9+dfsg1-10.9.9+dfsg1-10.9.9+dfsg1-10.9.9tools
crossbow (VCS, UP) 1.2.0-1bio
crux (VCS, UP) 3.1-1bio
ctdconverter (PTS, VCS, UP) 2.1-52.1-82.1-83.0a1bio-dev
ctdopts (PTS, VCS, UP) 1.5-21.5-51.5-51.5bio-dev
ctffind (PTS, VCS, UP) 4.1.14-34.1.14-35.0.2bio
cthreadpool (PTS, VCS, UP) 0.0+git20201207.b259a6e-10.0+git20231218.4eb5a69-10.0+git20231218.4eb5a69-10.0+git20231218.4eb5a69bio-dev
ctk (VCS, UP) 0.1.0+git20160903~cdb75ce-1imaging-dev
ctn (PTS, VCS, UP) 3.2.0~dfsg-73.2.0~dfsg-83.2.0~dfsg-83.2.0imaging imaging-dev
ctsim (PTS, VCS, UP) 6.0.2-66.0.2-66.0.2-66.0.2imaging
cufflinks (PTS, VCS, UP) 2.2.1+dfsg.1-92.2.1+dfsg.1-102.2.1+dfsg.1-102.2.1bio cloud
cutesv (PTS, VCS, UP) 2.0.2-12.1.1-12.1.1-12.1.1bio
cwlformat (PTS, VCS, UP) 2022.02.18-22022.02.18-32022.02.18-32022.02.18bio-dev
cwltest (PTS, VCS, UP) 2.5.20241122133319-12.5.20241122133319-12.5.20241122133319bio-dev
cwltool (PTS, VCS, UP) 3.1.20230209161050-13.1.20250110105449-33.1.20250110105449-33.1.20250110105449bio-dev covid-19
cycle (PTS, VCS, UP) 0.3.2-20.3.3-20.3.3-20.3.3tools
cytoscape (VCS, UP) 3.1.0-1bio
cyvcf2 (PTS, VCS, UP) 0.30.18-10.31.1-20.31.1-20.31.1bio covid-19 bio-dev
daligner (PTS, VCS, UP) 1.0+git20221215.bd26967-11.0+git20240119.335105d-31.0+git20240119.335105d-31.0+git20240119.335105dbio bio-ngs
damapper (PTS, VCS, UP) 0.0+git20210330.ab45103-10.0+git20240314.b025cf9-10.0+git20240314.b025cf9-10.0+git20240314.b025cf9bio
dascrubber (PTS, VCS, UP) 1.1-41.1-41.1-41.1bio
datamash (PTS, VCS, UP) 1.7-21.8-11.8-11.8bio cloud
dawg (PTS, VCS, UP) 1.2-41.2-41.2-41.2bio
dazzdb (PTS, VCS, UP) 1.0+git20221215.aad3a46-11.0+git20240115.be65e59-11.0+git20250217.a3eefd4-11.0+git20250217.a3eefd4bio
dazzle (VCS, UP) 1.01r3643-1bio
dcm2niix (PTS, VCS, UP) 1.0.20220720-1+deb12u11.0.20241211-11.0.20241211-11.0.20241211imaging
dcm4che (VCS, UP) 5.10.6-1imaging
dcmstack (PTS, VCS, UP) 0.9-10.9-30.9-30.9imaging-dev
dcmtk (PTS, VCS, UP) 3.6.7-9~deb12u13.6.9-43.6.9-43.6.9covid-19 imaging
debian-science (PTS, VCS, UP) 1.14.51.14.71.14.7psychology imaging bio statistics
deblur (PTS, VCS, UP) 1.1.1-41.1.1-41.1.1bio
deepbinner (VCS, UP) 0.2.0-1bio
delly (PTS, VCS, UP) 1.1.6-11.1.8-11.1.8-11.3.3bio covid-19
dendroscope (VCS, UP) 3.0+git20190219.a00d9b9+dfsg-1bio
density-fitness (PTS, VCS, UP) 1.0.8-41.1.2-11.1.2-11.1.3bio
dextractor (PTS, VCS, UP) 1.0-61.0-61.0-61.0bio covid-19
dialign (PTS, VCS, UP) 2.2.1-112.2.1-132.2.1-132.2.1bio-phylogeny bio cloud
dialign-t (PTS, VCS, UP) 1.0.2-141.0.2-151.0.2-15bio cloud bio-phylogeny
diamond-aligner (PTS, VCS, UP) 2.1.3-12.1.9-22.1.9-22.1.11bio covid-19
diann (VCS, UP) 1.8+dfsg-1bio
dicom3tools (PTS, VCS, UP) 1.00~20220618093127-21.00~20240118131615-11.00~20240118131615-11.00~20250128115421imaging
dicomscope (PTS, VCS, UP) 3.6.0-253.6.0-273.6.0-273.6.0imaging
dicoogle (VCS, UP) 2.5.0-1imaging
dipy (PTS, VCS, UP) 1.6.0-11.10.0-21.10.0-21.10.0imaging imaging-dev
discosnp (PTS, VCS, UP) 2.6.2-22.6.2-42.6.2-42.6.2covid-19 cloud bio
disulfinder (PTS, VCS, UP) 1.2.11-121.2.11-121.2.11-120.No-Sitebio cloud
dnaclust (PTS, VCS, UP) 3-73-73-73bio cloud
dnapi (PTS, VCS, UP) 1.1-31.1-31.1-31.1bio
dnarrange (PTS, VCS, UP) 1.5.3-11.5.3-1.11.5.3-1.11.6.3bio
drmaa (PTS, VCS, UP) 0.7.9-30.7.9-30.7.9covid-19
drop-seq (PTS, VCS, UP) 2.5.2+dfsg-13.0.2+dfsg-13.0.2+dfsg-13.0.2bio covid-19
dssp (PTS, VCS, UP) 4.2.2-24.4.10-14.4.10-14.4.11bio cloud
dwgsim (PTS, VCS, UP) 0.1.14-20.1.14-30.1.14-30.1.14bio
e-mem (PTS, VCS, UP) 1.0.1-51.0.1-51.0.1-51.0.1bio
ea-utils (PTS, VCS, UP) 1.1.2+dfsg-91.1.2+dfsg-91.1.2+dfsg-90.No-Trackbio
ecell (VCS, UP) 3.2.2-1bio
ecopcr (PTS, VCS, UP) 1.0.1+dfsg-41.0.1+dfsg-51.0.1+dfsg-5bio
edfbrowser (PTS, VCS, UP) 2.00+dfsg-12.12+dfsg-12.12+dfsg-12.12tools
edflib (PTS, VCS, UP) 1.23-11.27-11.27-11.27imaging-dev
edtsurf (PTS, VCS, UP) 0.2009-100.2009-100.2009-100.No-Releasebio
eegdev (PTS, VCS, UP) 0.2-60.2-100.2-100.2imaging-dev
eigensoft (PTS, VCS, UP) 8.0.0+dfsg-18.0.0+dfsg-28.0.0+dfsg-28.0.0bio
elastix (PTS, VCS, UP) 5.0.1-45.2.0-25.2.0-25.2.0imaging
elph (PTS, VCS, UP) 1.0.1-51.0.1-51.0.1-51.0.1bio
embassy-domainatrix (PTS, VCS, UP) 0.1.660-40.1.660-50.1.660-50.1.660cloud bio
embassy-domalign (PTS, VCS, UP) 0.1.660-40.1.660-50.1.660-50.1.660cloud bio
embassy-domsearch (PTS, VCS, UP) 0.1.660-30.1.660-40.1.660-40.1.660bio cloud
emboss (PTS, VCS, UP) 6.6.0+dfsg-126.6.0+dfsg-156.6.0+dfsg-156.6.0cloud bio
emboss-explorer (PTS, VCS, UP) 2.2.0-112.2.0-122.2.0-122.2.0bio
emmax (PTS, VCS, UP) 0~beta.20100307-30~beta.20100307-50~beta.20100307-50.No-Releasebio
emperor (PTS, VCS, UP) 1.0.3+ds-71.0.4+ds-11.0.4+ds-11.0.4bio
ensembl (VCS, UP) 98+git20190619.e98e194-1bio
ensembl-vep (VCS, UP) 100.2-1bio covid-19
entangle (PTS, VCS, UP) 3.0-33.0-43.0-43.0dental tools practice
epcr (PTS, VCS, UP) 2.3.12-1-92.3.12-1-102.3.12-1-100.No-Releasebio cloud
epifire (VCS, UP) 3.34.0+dfsg-1epi
estscan (PTS, VCS, UP) 3.0.3-63.0.3-63.0.3-63.0.3bio
euler-sr (VCS, UP) 1.1.2-1bio
euler2 (VCS, UP) 2.0-1bio
exabayes (VCS, UP) 1.5+dfsg-1bio
examl (PTS, VCS, UP) 3.0.22-33.0.22-63.0.22-63.0.22bio
exonerate (PTS, VCS, UP) 2.4.0-52.4.0-52.4.0-5cloud bio-phylogeny bio
fast5 (PTS, VCS, UP) 0.6.5-70.6.5-90.6.5-90.6.5bio-dev
fasta3 (PTS, VCS, UP) 36.3.8i.14-Nov-2020-136.3.8i.14-Nov-2020-336.3.8i.14-Nov-2020-336.3.8i.14-Nov-2020covid-19 bio
fastani (PTS, VCS, UP) 1.33-21.33-31.33-3bio covid-19
fastaq (PTS, VCS, UP) 3.17.0-53.17.0-93.17.0-93.17.0bio
fastdnaml (PTS, VCS, UP) 1.2.2-151.2.2-171.2.2-181.2.2cloud bio-phylogeny bio
fastlink (PTS, VCS, UP) 4.1P-fix100+dfsg-44.1P-fix100+dfsg-54.1P-fix100+dfsg-50.No-Releasecloud bio
fastml (PTS, VCS, UP) 3.11-33.11-43.11-40.No-Sitebio
fastp (PTS, VCS, UP) 0.23.2+dfsg-20.24.0+dfsg-10.24.0+dfsg-10.24.0bio covid-19
fastq-pair (PTS, VCS, UP) 1.0-31.0-31.0-31.0bio
fastqc (PTS, VCS, UP) 0.11.9+dfsg-60.12.1+dfsg-40.12.1+dfsg-40.12.1cloud covid-19 bio
fastqtl (PTS, VCS, UP) 2.184+v7+dfsg-32.184+v7+dfsg-42.184+v7+dfsg-47bio
fasttree (PTS, VCS, UP) 2.1.11-22.1.11-22.1.11-2bio-phylogeny bio cloud
fermi-lite (PTS, VCS, UP) 0.1+git20190320.b499514-10.1+git20221215.85f159e-10.1+git20221215.85f159e-10.1+git20221215.85f159ebio bio-dev
ffindex (PTS, VCS, UP) 0.9.9.9-60.9.9.9-70.9.9.9-70.9.9.9bio-dev bio
ffp (VCS, UP) 3.19-1bio
fieldbioinformatics (VCS, UP) 1.1.3-1covid-19 bio
figtree (PTS, VCS, UP) 1.4.4-51.4.4-61.4.4-61.4.4bio bio-phylogeny
fiji (VCS, UP) 2.3.1-1imaging
filtlong (PTS, VCS, UP) 0.2.1-30.2.1-40.2.1-40.2.1covid-19 bio
fis-gtm (PTS, VCS, UP) 7.0-005-17.1-006-17.1-006-17.1-006his
fitgcp (PTS, VCS, UP) 0.0.20150429-50.0.20150429-50.0.20150429-50.No-Releasecloud bio
flappie (VCS, UP) 2.1.3+ds-1bio covid-19
flash (PTS, VCS, UP) 1.2.11-21.2.11-21.2.11-21.2.11covid-19 bio
flexbar (PTS, VCS, UP) 3.5.0-53.5.0-53.5.0-53.5.0-63.5.0bio cloud
flye (PTS, VCS, UP) 2.9.1+dfsg-12.9.5+dfsg-12.9.5+dfsg-12.9.5bio covid-19
foreign (PTS, VCS, UP) 0.8.84-10.8.88-10.8.88-10.8.88psychology
forester (VCS, UP) 0.0+20180205-1bio bio-phylogeny bio-dev
freebayes (PTS, VCS, UP) 1.3.6-21.3.9-11.3.9-11.3.7-1~exp1.3.9covid-19 bio
freecontact (PTS, VCS, UP) 1.0.21-131.0.21-141.0.21-140.No-Sitebio-dev bio cloud
freeimage (PTS, VCS, UP) 3.18.0+ds2-9+deb12u13.18.0+ds2-113.18.0+ds2-11imaging-dev
freeshim (VCS, UP) 0.1.1+20110502-1practice
freesurfer (VCS, UP) 5.1.0+dev+cvs20120104-1imaging
fsa (PTS, VCS, UP) 1.15.9+dfsg-61.15.9+dfsg-61.15.9+dfsg-61.15.9bio
fsm-lite (PTS, VCS, UP) 1.0-81.0-81.0-81.0bio
galaxy (VCS, UP) 16.10-1bio
galaxy-lib (VCS, UP) 19.5.2-1bio-dev
galileo (PTS, VCS, UP) 0.5.1-9.10.5.1-110.5.1-110.5.1tools
gamgi (PTS, VCS, UP) 0.17.5-10.17.5-10.17.5bio
garli (PTS, VCS, UP) 2.1-72.1-92.1-92.1bio
garlic (PTS, VCS, UP) 1.6-31.6-31.6-31.6bio
gasic (PTS, VCS, UP) 0.0.r19-80.0.r19-80.0.r19-80.0.r16bio cloud
gatb-core (PTS, VCS, UP) 1.4.2+dfsg-111.4.2+dfsg-131.4.2+dfsg-131.4.2bio bio-dev
gatk (VCS, UP) 4.2.0.0+dfsg-1bio
gatk-bwamem (PTS, VCS, UP) 1.0.4+dfsg2-21.0.4+dfsg2-31.0.4+dfsg2-31.0.4bio-dev
gatk-fermilite (PTS, VCS, UP) 1.2.1+dfsg-21.2.1+dfsg-21.2.1+dfsg-21.2.1bio-dev
gatk-native-bindings (PTS, VCS, UP) 1.0.0+dfsg-21.0.0+dfsg-21.0.0+dfsg-21.0.0bio-dev
gbrowse (PTS, VCS, UP) 2.56+dfsg-112.56+dfsg-122.56+dfsg-122.56bio
gdcm (PTS, VCS, UP) 3.0.21-13.0.24-53.0.24-53.0.25covid-19 imaging-dev imaging
gdpc (PTS, VCS, UP) 2.2.5-152.2.5-162.2.5-160.No-Releasebio
gemma (PTS, VCS, UP) 0.98.5+dfsg-20.98.5+dfsg-30.98.5+dfsg-30.98.5bio
genometester (PTS, VCS, UP) 4.0+git20200511.91cecb5+dfsg-14.0+git20200511.91cecb5+dfsg-14.0+git20200511.91cecb5+dfsg-14.0+git20221122.71e6625bio
genomethreader (PTS, VCS, UP) 1.7.3+dfsg-71.7.3+dfsg-101.7.3+dfsg-101.7.3bio
genometools (PTS, VCS, UP) 1.6.2+ds-31.6.5+ds-2.21.6.5+ds-2.21.6.5+ds-2~bpo12+11.6.5bio-dev covid-19 cloud bio
genomicsdb (PTS, VCS, UP) 1.4.4-31.5.4-51.5.4-51.5.5bio-dev bio
gentle (PTS, VCS, UP) 1.9+cvs20100605+dfsg1-101.9.5~alpha2+dfsg1-21.9.5~alpha2+dfsg1-21.9.5~alpha2bio
gerp++ (VCS, UP) 2.1-1bio
getdata (PTS, VCS, UP) 0.2-40.2-40.2-40.No-Trackbio
gfapy (PTS, VCS, UP) 1.2.3+dfsg-21.2.3+dfsg-31.2.3+dfsg-31.2.3bio-dev
gff2aplot (PTS, VCS, UP) 2.0-142.0-152.0-152.0cloud bio
gff2ps (PTS, VCS, UP) 0.98l-60.98l-60.98l-60.98lbio cloud
gffread (PTS, VCS, UP) 0.12.7-30.12.7-80.12.7-80.12.7covid-19 bio-dev bio
ggd-utils (PTS, VCS, UP) 1.0.0+ds-11.0.0+ds-11.0.0+ds-11.0.0bio
ghemical (PTS, VCS, UP) 3.0.0-53.0.0-5bio
ghmm (PTS, VCS, UP) 0.9~rc3-40.9~rc3-110.9~rc3-110.9~rc3bio
gifticlib (PTS, VCS, UP) 1.0.9-61.0.9-61.0.9-61.0.9imaging-dev
glam2 (PTS, VCS, UP) 1064-91064-101064-100.No-Sitebio cloud
gmap (PTS, VCS, UP) 2021-12-17+ds-32024-11-20+ds-22024-11-20+ds-22024-11-20bio cloud bio-phylogeny
gmic (PTS, VCS, UP) 2.9.4-42.9.4-4.12.9.4-4.13.5.2imaging-dev
gnumed-client (PTS, VCS, UP) 1.8.9+dfsg-11.8.19+dfsg-11.8.19+dfsg-11.8.19covid-19 practice
gnumed-server (PTS, VCS, UP) 22.19-122.28-122.28-122.29covid-19 practice
golang-github-biogo-hts (PTS, VCS, UP) 1.4.4+dfsg1-11.4.5+dfsg1-21.4.5+dfsg1-21.4.5bio-dev
goldencheetah (PTS, VCS, UP) 3.5-1.13.5-73.5-73.7~DEV2412tools
grabix (PTS, VCS, UP) 0.1.7-40.1.7-50.1.7-50.1.7bio
gramalign (VCS, UP) 3.0-1bio
graphbin (VCS, UP) 1.1-1bio
graphlan (PTS, VCS, UP) 1.1.3-41.1.3-61.1.3-61.1.3bio
graphmap2 (VCS, UP) 0.6.4-1bio covid-19
grinder (PTS, VCS, UP) 0.5.4-60.5.4-60.5.4-60.5.4cloud bio
gromacs (PTS, VCS, UP) 2022.5-22025.0-22025.0-22025.0covid-19 bio cloud
gsort (PTS, VCS, UP) 0.1.4-30.1.4-30.1.4-30.1.4bio
gubbins (PTS, VCS, UP) 2.4.1-53.4-23.4-23.4covid-19 bio
gwama (PTS, VCS, UP) 2.2.2+dfsg-52.2.2+dfsg-62.2.2+dfsg-6bio
gwyddion (PTS, VCS, UP) 2.62-12.67-12.67-13.0imaging
haploview (VCS, UP) 4.1-1bio
harvest-tools (PTS, VCS, UP) 1.3-81.3-81.3-81.3bio
hdf5 (PTS, VCS, UP) 1.10.8+repack1-11.14.5+repack-31.14.5+repack-31.14.6bio bio-dev
heudiconv (PTS, VCS, UP) 0.11.6-11.3.2-11.3.2imaging
hhsuite (PTS, VCS, UP) 3.3.0+ds-73.3.0+ds-83.3.0+ds-83.3.0bio cloud
hilive (PTS, VCS, UP) 2.0a-32.0a-42.0a-52.0abio
hinge (PTS, VCS, UP) 0.5.0-70.5.0-70.5.0bio
hisat2 (PTS, VCS, UP) 2.2.1-42.2.1-52.2.1-52.2.1bio cloud
hmmer (PTS, VCS, UP) 3.3.2+dfsg-13.4+dfsg-23.4+dfsg-23.4bio cloud bio-phylogeny
hmmer2 (PTS, VCS, UP) 2.3.2+dfsg-82.3.2+dfsg-122.3.2+dfsg-122.3.2bio
hnswlib (PTS, VCS, UP) 0.6.2-2+deb12u10.8.0-10.8.0-10.8.0bio
htqc (VCS, UP) 1.92.3-1bio
hts-nim-tools (PTS, VCS, UP) 0.2.1-10.2.1-20.2.1bio
htscodecs (PTS, VCS, UP) 1.3.0-41.6.1-21.6.1-21.6.1bio-dev covid-19
htseq (PTS, VCS, UP) 1.99.2-12.0.9+dfsg-12.0.9+dfsg-12.0.9bio-dev bio covid-19
htsjdk (PTS, VCS, UP) 3.0.4+dfsg-24.1.3+dfsg-24.1.3+dfsg-24.1.3bio-dev
htslib (PTS, VCS, UP) 1.16+ds-31.21+ds-11.21+ds-11.21bio-ngs bio cloud bio-dev
hunspell-en-med (PTS, VCS, UP) 0.0.20140410-40.0.20140410-60.0.20140410-60.0.20140410tools
hyphy (PTS, VCS, UP) 2.5.47+dfsg-12.5.63+dfsg-12.5.68+dfsg-12.5.68bio
icb-utils (PTS, VCS, UP) 2.0.1+git20161002.afee1d9-52.0.1+git20161002.afee1d9-52.0.1+git20161002.afee1d9-52.0.1+git20161002.afee1d9bio-dev
idba (PTS, VCS, UP) 1.1.3-81.1.3-81.1.3-81.1.3bio cloud
idefix (VCS, UP) 1.3-1bio
idseq-bench (PTS, VCS, UP) 0.0~git20210602.27fb6dc-10.0~git20210602.27fb6dc-1bio
idseq-dag (VCS, UP) 4.2.3-1covid-19
igor (PTS, VCS, UP) 1.4.0+dfsg-41.4.0+dfsg-51.4.0+dfsg-51.4.0bio
igv (PTS, VCS, UP) 2.16.0+dfsg-12.18.5+dfsg-12.18.5+dfsg-12.19.2bio
illustrate (PTS, VCS, UP) 0.0+git20200923.217db48-20.0+git20200923.217db48-20.0+git20200923.217db48-20.0+git20240817.e469df4imaging bio
imagej (PTS, VCS, UP) 1.53t-11.54g-11.54g-1covid-19 imaging
imagemagick (PTS, VCS, UP) 6.9.11.60+dfsg-1.6+deb12u27.1.1.43+dfsg1-17.1.1.43+dfsg1-17.1.1.44imaging
imagetooth (PTS, VCS, UP) 2.0.1-32.0.1-42.0.1-42.0.1dental
imview (PTS, VCS, UP) 1.1.9h-41.1.9h-41.1.9h-40.No-Releaseimaging
indelible (PTS, VCS, UP) 1.03-51.03-61.03-60.No-Sitebio
infernal (PTS, VCS, UP) 1.1.4-11.1.5-31.1.5-31.1.5bio cloud
insightapplications (VCS, UP) 3.20.0-1.1imaging
insighttoolkit5 (PTS, VCS, UP) 5.2.1-55.4.0-25.4.0-25.4.0imaging-dev
insilicoseq (PTS, VCS, UP) 1.5.4-62.0.1-12.0.1-12.0.1bio
inspect (VCS, UP) 0.0.20120109-1bio
intake (PTS, VCS, UP) 0.6.6-10.6.6-32.0.8bio bio-dev
invesalius (PTS, VCS, UP) 3.1.99998-43.1.99998-73.1.99998-73.1.99998imaging
ipig (PTS, VCS, UP) 0.0.r5-40.0.r5-50.0.r5-50.0.r5bio
iqtree (PTS, VCS, UP) 2.0.7+dfsg-12.0.7+dfsg-12.0.7+dfsg-12.0.7bio bio-phylogeny
ismrmrd (PTS, VCS, UP) 1.8.0-21.8.0-21.8.0-21.14.2imaging imaging-dev
iva (PTS, VCS, UP) 1.0.11+ds-31.0.11+ds-61.0.11+ds-61.0.11bio
ivar (PTS, VCS, UP) 1.3.1+dfsg-71.4.3+dfsg-21.4.4+dfsg-11.4.4covid-19
jaligner (PTS, VCS, UP) 1.0+dfsg-101.0+dfsg-111.0+dfsg-111.0bio
jalview (PTS, VCS, UP) 2.11.2.5+dfsg-32.11.4.1+dfsg-12.11.4.1+dfsg-12.11.4.1bio
jbrowse (VCS, UP) 1.2.3-1bio
jebl2 (PTS, VCS, UP) 0.1+git20201011.969bd4b-10.1+git20230701.b3c0f25-10.1+git20230701.b3c0f25-10.1+git20231105.51da3b1bio-dev
jellyfish (PTS, VCS, UP) 2.3.0-152.3.1-42.3.1-42.3.1cloud bio
jellyfish1 (PTS, VCS, UP) 1.1.11-81.1.11-101.1.11-101.1.11bio
jist (VCS, UP) 2.0.20100907.dfsg1-1imaging
jmodeltest (PTS, VCS, UP) 2.1.10+dfsg-122.1.10+dfsg-122.1.10+dfsg-122.1.10bio bio-phylogeny
jmol (PTS, VCS, UP) 14.32.83+dfsg-216.2.33+dfsg-116.2.33+dfsg-116.2.37bio
joypy (PTS, VCS, UP) 0.2.6-10.2.6-10.2.6-10.2.6bio-dev
kalign (PTS, VCS, UP) 3.3.5-13.4.0-13.4.0-13.4.0bio cloud bio-phylogeny covid-19
kallisto (PTS, VCS, UP) 0.48.0+dfsg-30.48.0+dfsg-40.48.0+dfsg-40.51.1covid-19 bio
kaptive (PTS, VCS, UP) 2.0.4-12.0.8-12.0.8-13.0.0b6bio
kbibtex (PTS, VCS, UP) 0.9.90-1.10.10.0-40.10.0-40.10.0typesetting
kempbasu (VCS, UP) 0.9.1-1bio
khmer (PTS, VCS, UP) 3.0.0~a3+dfsg-43.0.0~a3+dfsg-9~0expbio
kineticstools (PTS, VCS, UP) 0.6.1+git20220223.1326a4d+dfsg-20.6.1+git20220223.1326a4d+dfsg-60.6.1+git20220223.1326a4dbio bio-dev
king (PTS, VCS, UP) 2.24+dfsg2-12.24+dfsg2-22.24+dfsg2-22.24imaging typesetting
king-probe (PTS, VCS, UP) 02.21-102.21-102.21-102.26bio
kissplice (PTS, VCS, UP) 2.6.2-22.6.7-12.6.7-12.6.7bio cloud
kleborate (PTS, VCS, UP) 2.3.1-22.4.1-32.4.1-43.1.3bio
kma (PTS, VCS, UP) 1.4.11-11.4.19-11.4.19-11.4.20bio
kmc (PTS, VCS, UP) 3.2.1+dfsg-13.2.4+dfsg-13.2.4+dfsg-13.2.4bio
kmer (PTS, VCS, UP) 0~20150903+r2013-80~20150903+r2013-90~20150903+r2013-90.No-Releasebio-dev bio
kmerresistance (PTS, VCS, UP) 2.2.0-42.2.0-42.2.0-42.2.0bio
kradview (VCS, UP) 1.1.0-2imaging
kraken (PTS, VCS, UP) 1.1.1-41.1.1-41.1.1-41.1.1bio
kraken2 (PTS, VCS, UP) 2.1.2-22.1.3-12.1.3-12.14covid-19 bio
lagan (PTS, VCS, UP) 2.0-92.0-102.0-10bio
lamarc (PTS, VCS, UP) 2.1.10.1+dfsg-72.1.10.1+dfsg-72.1.10.1+dfsg-7bio
lamassemble (PTS, VCS, UP) 1.4.2-51.7.2-21.7.2-21.7.2bio
lambda-align (PTS, VCS, UP) 1.0.3-61.0.3-61.0.3-61.0.3-71.0.3bio
lambda-align2 (PTS, VCS, UP) 2.0.0-92.0.1-32.0.1-32.0.1bio
last-align (PTS, VCS, UP) 1447-11542-11609-11611cloud bio bio-ngs
lastz (PTS, VCS, UP) 1.04.22-21.04.22-21.04.22-21.04.45covid-19 bio
lefse (PTS, VCS, UP) 1.1.2-11.1.2-21.1.2-21.1.2bio
libace-perl (PTS, VCS, UP) 1.92-111.92-121.92-121.92bio-dev
libai-fann-perl (PTS, VCS, UP) 0.10-50.10-50.10-50.10bio-dev
libargs (PTS, VCS, UP) 6.4.1-16.4.1-16.4.1-16.4.6bio-dev
libatomicqueue (VCS, UP) 0.0+git20200609.b6da4a9-1bio-dev
libbigwig (PTS, VCS, UP) 0.4.7+dfsg-30.4.7+dfsg-3.10.4.7+dfsg-3.10.4.8bio-dev
libbio-alignio-stockholm-perl (PTS, VCS, UP) 1.7.3-21.7.3-21.7.3-21.7.3bio-dev
libbio-asn1-entrezgene-perl (PTS, VCS, UP) 1.730-21.730-31.730-31.730bio-dev
libbio-chado-schema-perl (PTS, VCS, UP) 0.20000-30.20000-30.20000-30.20000bio-dev
libbio-cluster-perl (PTS, VCS, UP) 1.7.3-61.7.3-61.7.3-61.7.3bio-dev
libbio-coordinate-perl (PTS, VCS, UP) 1.7.1-41.7.1-41.7.1-41.7.1bio-dev
libbio-das-lite-perl (PTS, VCS, UP) 2.11-82.11-92.11-92.11bio-dev
libbio-db-biofetch-perl (PTS, VCS, UP) 1.7.3-41.7.3-41.7.3-41.7.3bio-dev
libbio-db-embl-perl (PTS, VCS, UP) 1.7.4-41.7.4-41.7.4-41.7.4bio-dev
libbio-db-hts-perl (PTS, VCS, UP) 3.01-43.01-53.01-53.01bio-dev
libbio-db-ncbihelper-perl (PTS, VCS, UP) 1.7.7-11.7.8-11.7.8-11.7.8bio-dev
libbio-db-seqfeature-perl (PTS, VCS, UP) 1.7.4-21.7.5-11.7.5-11.7.5bio-dev
libbio-eutilities-perl (PTS, VCS, UP) 1.77-21.77-31.77-31.77bio-dev
libbio-featureio-perl (PTS, VCS, UP) 1.6.905-21.6.905-21.6.905-21.6.905bio-dev
libbio-graphics-perl (PTS, VCS, UP) 2.40-62.40-62.40-62.40bio-dev
libbio-mage-perl (PTS, VCS, UP) 20030502.3-620030502.3-620030502.3-6bio-dev
libbio-mage-utils-perl (PTS, VCS, UP) 20030502.0-520030502.0-520030502.0-5bio-dev
libbio-primerdesigner-perl (PTS, VCS, UP) 0.07-80.07-80.07-80.07bio-dev
libbio-samtools-perl (PTS, VCS, UP) 1.43-31.43-51.43-51.43bio-dev
libbio-scf-perl (PTS, VCS, UP) 1.03-61.03-71.03-71.03bio-dev
libbio-tools-phylo-paml-perl (PTS, VCS, UP) 1.7.3-41.7.3-41.7.3-41.7.3bio-dev
libbio-tools-run-alignment-clustalw-perl (PTS, VCS, UP) 1.7.4-31.7.4-41.7.4-41.7.4bio-dev
libbio-tools-run-alignment-tcoffee-perl (PTS, VCS, UP) 1.7.4-31.7.4-31.7.4bio-dev
libbio-tools-run-remoteblast-perl (PTS, VCS, UP) 1.7.3-31.7.3-31.7.3-31.7.3bio-dev
libbio-variation-perl (PTS, VCS, UP) 1.7.5-31.7.5-31.7.5-31.7.5bio-dev
libbioparser-dev (PTS, VCS, UP) 3.0.15-33.1.0-13.1.0-13.1.0bio-dev
libbiosoup-dev (PTS, VCS, UP) 0.10.0-40.11.0-20.11.0-20.11.0bio-dev
libbpp-core (PTS, VCS, UP) 2.4.1-92.4.1-132.4.1-132.4.1bio-dev
libbpp-phyl (PTS, VCS, UP) 2.4.1-82.4.1-112.4.1-112.4.1bio-dev
libbpp-phyl-omics (PTS, VCS, UP) 2.4.1-42.4.1-72.4.1-72.4.1bio-dev
libbpp-popgen (PTS, VCS, UP) 2.4.1-82.4.1-112.4.1-112.4.1bio-dev
libbpp-qt (PTS, VCS, UP) 2.4.1-82.4.1-122.4.1-122.4.1bio-dev
libbpp-raa (PTS, VCS, UP) 2.4.1-72.4.1-92.4.1-92.4.1bio-dev
libbpp-seq (PTS, VCS, UP) 2.4.1-92.4.1-132.4.1-132.4.1bio-dev
libbpp-seq-omics (PTS, VCS, UP) 2.4.1-92.4.1-122.4.1-122.4.1bio-dev
libchado-perl (PTS, VCS, UP) 1.31-61.31-61.31-61.31bio-dev
libchipcard (PTS, VCS, UP) 5.1.6-15.1.6-25.1.6-25.99.1beta-25.99.1betapractice covid-19
libcifpp (PTS, VCS, UP) 5.0.7.1-17.0.9-17.0.9-17.0.9bio-dev
libctapimkt (PTS, VCS, UP) 1.0.5~rc1-91.0.5~rc1-91.0.5~rc1-90.No-Trackpractice
libdisorder (PTS, VCS, UP) 0.0.2+git20130809.8062ee1-40.0.2+git20130809.8062ee1-40.0.2+git20130809.8062ee1-40.0.2+git20130809.8062ee1bio-dev
libdivsufsort (PTS, VCS, UP) 2.0.1-52.0.1-62.0.1-62.0.1bio-dev
libedlib (PTS, VCS, UP) 1.2.7-41.2.7-61.2.7-61.2.7bio-dev
libfast-perl (VCS, UP) 1.7+dfsg-1bio-dev
libfastahack (PTS, VCS, UP) 1.0.0+dfsg-101.0.0+dfsg-111.0.0+dfsg-111.0.0bio-dev bio
libfreecontact-perl (PTS, VCS, UP) 0.08-90.08-90.08-90.No-Sitebio-dev
libgclib (PTS, VCS, UP) 0.12.7+ds-50.12.7+ds-60.12.7+ds-60.12.7covid-19 bio-dev
libgdf (PTS, VCS, UP) 0.1.3-110.1.3-11.10.1.3-11.10.1.3imaging physics imaging-dev
libgenome (PTS, VCS, UP) 1.3.11+svn20110227.4616-51.3.11+svn20110227.4616-61.3.11+svn20110227.4616-60.No-Releasebio-dev
libgenome-model-tools-music-perl (PTS, VCS, UP) 0.04-50.04-50.04-50.04bio-dev
libgenome-perl (PTS, VCS, UP) 0.06-70.06-70.06-70.06bio-dev
libgff (PTS, VCS, UP) 2.0.0-32.0.0-32.0.0-32.0.0bio-dev
libgkarrays (PTS, VCS, UP) 2.1.0+dfsg-42.1.0+dfsg-4.22.1.0+dfsg-4.2bio-dev
libgo-perl (PTS, VCS, UP) 0.15-90.15-100.15-100.15bio-dev
libgoby-java (PTS, VCS, UP) 3.3.1+dfsg2-93.3.1+dfsg2-113.3.1+dfsg2-113.3.1bio-dev
libhmsbeagle (PTS, VCS, UP) 3.1.2+dfsg-134.0.1+dfsg-34.0.1+dfsg-34.0.1bio-dev
libics (PTS, VCS, UP) 1.6.6-11.6.8-11.6.8-11.6.8covid-19 imaging-dev
libjloda-java (PTS, VCS, UP) 2.1-22.1+ds-32.1+ds-32.1bio-dev
libmaus2 (PTS, VCS, UP) 2.0.813+ds-12.0.813+ds-32.0.813+ds-42.0.813covid-19 bio-dev
libmems (PTS, VCS, UP) 1.6.0+4725-91.6.0+4725-111.6.0+4725-110.No-Releasebio-dev
libmialm (PTS, VCS, UP) 1.0.9-31.0.9-41.0.9-41.0.9imaging-dev
libminc (PTS, VCS, UP) 2.4.05-42.4.06-2.12.4.06-2.12.4.06imaging-dev
libmuscle (PTS, VCS, UP) 3.7+4565-73.7+4565-83.7+4565-80.No-Releasebio-dev
libncl (PTS, VCS, UP) 2.1.21+git20210811.b1213a7-42.1.21+git20210811.b1213a7-62.1.21+git20210811.b1213a7-62.1.21+git20231019.f845ec2bio bio-dev
libnexml-java (VCS, UP) 0.1+dfsg-1bio-dev
libnhgri-blastall-perl (PTS, VCS, UP) 0.66-40.66-40.66-40.66bio-dev
libpal-java (PTS, VCS, UP) 1.5.1+dfsg-81.5.1+dfsg-91.5.1+dfsg-91.5.1bio-dev
libpdb-redo (PTS, VCS, UP) 3.0.5-23.2.1-13.2.1-13.2.1bio-dev
libpll (PTS, VCS, UP) 0.3.2-40.3.2-50.3.2-50.3.2bio-dev
libpsortb (PTS, VCS, UP) 1.0+dfsg-51.0+dfsg-71.0+dfsg-71.0bio-dev
libpwiz (PTS, VCS, UP) 3.0.18342-43.0.18342-4.1bio-dev bio
libqes (PTS, VCS, UP) 0.2.8+ds-10.2.8+ds-10.2.8+ds-10.2.8bio-dev
librcsb-core-wrapper (PTS, VCS, UP) 1.005-111.005-131.005-131.005bio-dev
librdp-taxonomy-tree-java (PTS, VCS, UP) 1.2.0-61.2.0-61.2.0-61.2.0bio-dev
librg-blast-parser-perl (PTS, VCS, UP) 0.03-90.03-90.03-90.No-Sitebio-dev
librg-utils-perl (PTS, VCS, UP) 1.0.43-81.0.43-91.0.43-90.No-Sitebio
librostlab (PTS, VCS, UP) 1.0.20-121.0.20-141.0.20-140.No-Sitebio-dev
librostlab-blast (PTS, VCS, UP) 1.0.1-131.0.1-141.0.1-140.No-Sitebio-dev
libsbml (PTS, VCS, UP) 5.19.7+dfsg-25.20.4+dfsg-0.15.20.4+dfsg-0.15.20.4bio-dev
libseqlib (PTS, VCS, UP) 1.2.0+dfsg-91.2.0+dfsg-111.2.0+dfsg-111.2.0bio-dev
libslow5lib (PTS, VCS, UP) 0.7.0+dfsg-20.7.0+dfsg-30.7.0+dfsg-31.3.0bio-dev
libsmithwaterman (PTS, VCS, UP) 0.0+git20160702.2610e25-120.0+git20160702.2610e25-120.0+git20160702.2610e25-120.0+git20160702.2610e25bio-dev bio
libsort-key-top-perl (PTS, VCS, UP) 0.08-40.08-40.08-40.08bio-dev
libssw (PTS, VCS, UP) 1.1-131.1-151.1-151.2.5-11.2.5bio bio-dev
libstatgen (PTS, VCS, UP) 1.0.15-61.0.15-81.0.15-81.0.15bio-dev
libtabixpp (PTS, VCS, UP) 1.1.2-11.1.2-2.11.1.2-2.11.1.2bio-dev
libtfbs-perl (PTS, VCS, UP) 0.7.1+ds-20.7.1+ds-40.7.1+ds-40.7.1bio-dev
libthread-pool (PTS, VCS, UP) 4.0.0-14.0.0-24.0.0-24.0.0bio-dev
libvbz-hdf-plugin (PTS, VCS, UP) 1.0.2-21.0.2-3.11.0.2-3.1bio-dev
libvcflib (PTS, VCS, UP) 1.0.3+dfsg-21.0.12+dfsg-11.0.12+dfsg-11.0.12bio bio-ngs bio-dev
libvigraimpex (PTS, VCS, UP) 1.11.1+dfsg-111.12.1+dfsg-31.12.1+dfsg-31.12.1imaging-dev
libvistaio (PTS, VCS, UP) 1.2.19-31.2.19-31.2.19-31.2.19imaging-dev
libwfa2 (PTS, VCS, UP) 2.3.3-12.3.3-42.3.3-42.3.5bio-dev
libxdf (PTS, VCS, UP) 0.99.8+dfsg-20.99.8+dfsg-30.99.8+dfsg-30.99.9imaging-dev
libzerg (PTS, VCS, UP) 1.0.7-111.0.7-111.0.7-111.0.7bio-dev
libzerg-perl (PTS, VCS, UP) 1.0.4-81.0.4-81.0.4-80.No-Sitebio-dev
lighter (PTS, VCS, UP) 1.1.2-71.1.3-11.1.3-11.1.3bio covid-19
loki (PTS, VCS, UP) 2.4.7.4-102.4.7.4-122.4.7.4-120.No-Sitecloud bio
ltrsift (PTS, VCS, UP) 1.0.2-91.0.2-101.0.2-101.0.2bio
lucy (PTS, VCS, UP) 1.20-31.20-51.20-61.20bio
lumpy-sv (PTS, VCS, UP) 0.3.1+dfsg-70.3.1+dfsg-70.3.1+dfsg-70.3.1covid-19 bio
mach-haplotyper (VCS, UP) 1.0.18-1bio
macromoleculebuilder (PTS, VCS, UP) 4.0.0+dfsg-24.0.0+dfsg-54.0.0+dfsg-54.0.0+dfsg-3.1~exp14.2bio-dev bio covid-19
macs (PTS, VCS, UP) 2.2.7.1-63.0.2-13.0.2-13.0.3cloud bio
macsyfinder (PTS, VCS, UP) 2.0-22.1.4-12.1.4-12.1.4bio
maffilter (PTS, VCS, UP) 1.3.1+dfsg-41.3.1+dfsg-61.3.1+dfsg-61.3.1bio
mafft (PTS, VCS, UP) 7.505-17.505-17.505-17.525bio cloud
mage2tab (VCS, UP) 0.9-1bio
malt (PTS, VCS, UP) 0.5.2-20.5.2-30.5.2-30.5.2bio
manta (VCS, UP) 1.6.0+dfsg-1covid-19 bio
mapdamage (PTS, VCS, UP) 2.2.1+dfsg-32.2.2+dfsg-12.2.2+dfsg-12.2.2bio
mapsembler2 (PTS, VCS, UP) 2.2.4+dfsg1-42.2.4+dfsg1-42.2.4+dfsg1-42.2.4bio cloud
maq (PTS, VCS, UP) 0.7.1-90.7.1-100.7.1-100.7.1bio bio-ngs cloud
maqview (PTS, VCS, UP) 0.2.5-110.2.5-120.2.5-120.No-Sitebio
marginphase (VCS, UP) 0.0+git20181109.cdf139e-1bio
martj (VCS, UP) 0.9+dfsg-1bio
mash (PTS, VCS, UP) 2.3+dfsg-32.3+dfsg-62.3+dfsg-62.3bio
massxpert (PTS, VCS, UP) 7.0.0-25.8.2bio
massxpert2 (PTS, VCS, UP) 8.5.0-28.5.0-2bio
maude (PTS, VCS, UP) 3.2-23.4-13.4-13.5bio
mauve-aligner (PTS, VCS, UP) 2.4.0+4736-62.4.0+4736-62.4.0+4736-60.No-Releasebio
maxflow (PTS, VCS, UP) 3.0.5-33.0.5-43.0.5-43.0.5imaging-dev
mayam (VCS, UP) 0.8-1imaging
mcaller (PTS, VCS, UP) 1.0.3+git20210624.b415090-31.0.3+git20210624.b415090-31.0.3+git20210624.b415090-31.0.3+git20210624.b415090bio
mcl (PTS, VCS, UP) 22-282+ds-222-282+ds-422-282+ds-422-282bio-dev
mecat2 (PTS, VCS, UP) 0.0+git20200428.f54c542+ds-30.0+git20200428.f54c542+ds-40.0+git20200428.f54c542+ds-40.0+git20200428.f54c542covid-19 bio
medaka (VCS, UP) 1.0.3+dfsg-1covid-19 bio
medicalterms (PTS, VCS, UP) 20220425-120230905-120230905-120230905tools
megadepth (PTS, VCS, UP) 1.2.0-41.2.0-41.2.0-41.2.0bio
megahit (PTS, VCS, UP) 1.2.9-41.2.9-51.2.9-51.2.9covid-19 bio
megan-ce (PTS, VCS, UP) 6.21.1+dfsg-26.21.1+dfsg-46.21.1+dfsg-46.21.1bio
melting (PTS, VCS, UP) 5.2.0-25.2.0-25.2.0-25.2.0cloud bio
meme (VCS, UP) 5.5.5-1bio
mencal (PTS, VCS, UP) 3.0-63.0-63.0-63.0tools
mesquite (VCS, UP) 3.04+dfsg.1-1bio
metabat (PTS, VCS, UP) 2.15-42.15-42.15-42.17covid-19 bio
metabit (VCS, UP) 0.0+git20170725.24cb3ee+dfsg-1bio
metaeuk (PTS, VCS, UP) 7-bba0d80+ds-17-bba0d80+ds-17-bba0d80bio
metaphlan (PTS, VCS, UP) 4.0.4-14.0.4-14.0.4-14.1.1bio
metastudent (PTS, VCS, UP) 2.0.1-92.0.1-102.0.1-100.No-Sitebio
metastudent-data (PTS, VCS, UP) 2.0.1-82.0.1-82.0.1-80.No-Sitebio
metastudent-data-2 (PTS, VCS, UP) 1.0.0-61.0.0-61.0.0-60.No-Sitebio
mhap (PTS, VCS, UP) 2.1.3+dfsg-32.1.3+dfsg-32.1.3+dfsg-32.1.3bio bio-ngs
mia (PTS, VCS, UP) 2.4.7-112.4.7-132.4.7imaging imaging-dev
mialmpick (PTS, VCS, UP) 0.2.15-20.2.15-20.2.15imaging
miaviewit (PTS, VCS, UP) 1.0.5-3imaging
microbegps (PTS, VCS, UP) 1.0.0-51.0.0-71.0.0-71.0.0bio
microbiomeutil (PTS, VCS, UP) 20101212+dfsg1-520101212+dfsg1-620101212+dfsg1-620101212bio
micromanager (VCS, UP) 1.4.10-1imaging
milib (PTS, VCS, UP) 2.2.0+dfsg-12.2.0+dfsg-12.2.0+dfsg-1covid-19 bio-dev
minc-tools (PTS, VCS, UP) 2.3.00+dfsg-102.3.00+dfsg-122.3.00+dfsg-122.3.00imaging
mindthegap (PTS, VCS, UP) 2.3.0-22.3.0-42.3.0bio
minexpert2 (PTS, VCS, UP) 8.6.3-19.6.0-19.6.0-1bio
minia (PTS, VCS, UP) 3.2.6-33.2.6-43.2.6-43.2.6covid-19 bio cloud
miniasm (PTS, VCS, UP) 0.3+dfsg-40.3+dfsg-40.3+dfsg-40.3bio
minimac4 (PTS, VCS, UP) 4.1.2-14.1.6-14.1.6-14.1.6bio
minimap (PTS, VCS, UP) 0.2-70.2-80.2-80.2bio-dev bio
minimap2 (PTS, VCS, UP) 2.24+dfsg-32.27+dfsg-12.27+dfsg-12.28bio bio-dev covid-19
mipav (VCS, UP) 5.0.0.20100907-2imaging
mipe (PTS, VCS, UP) 1.1-91.1-91.1-91.1bio cloud
mira (PTS, VCS, UP) 4.9.6-74.9.6-114.9.6-114.9.6cloud bio
mirtop (PTS, VCS, UP) 0.4.25-20.4.28-30.4.28-30.4.28bio-dev bio
mlv-smile (PTS, VCS, UP) 1.47-81.47-81.47bio cloud
mmseqs2 (PTS, VCS, UP) 14-7e284+ds-115-6f452+ds-215-6f452+ds-217-b804fcovid-19 bio
mmtf-python (PTS, VCS, UP) 1.1.3-11.1.3-11.1.3-1covid-19
mni-colin27 (VCS, UP) 1.1-2imaging
modeller (VCS, UP) 9.19-1bio
molekel (VCS, UP) 5.4-1bio
mosaik-aligner (VCS, UP) 2.2.30+20140627-1bio
mosdepth (PTS, VCS, UP) 0.3.3+ds-20.3.10+ds-10.3.11bio
mothur (PTS, VCS, UP) 1.48.0-21.48.1-11.48.1-11.48.2cloud bio
mpsqed (VCS, UP) 0.9.3-1bio
mptp (PTS, VCS, UP) 0.2.4-30.2.5-10.2.5-10.2.5bio
mrbayes (PTS, VCS, UP) 3.2.7a-63.2.7a-73.2.7a-73.2.7acloud bio bio-phylogeny
mricron (PTS, VCS, UP) 1.2.20211006+dfsg-41.2.20211006+dfsg-61.2.20211006+dfsg-61.2.20211006imaging
mrtrix3 (PTS, VCS, UP) 3.0.3-33.0.4-13.0.4-13.0.4imaging
mssstest (PTS, VCS, UP) 3.0-73.0-73.0-70.No-Releasetools
mugsy (VCS, UP) 1r2.3+dfsg-1bio
multiqc (PTS, VCS, UP) 1.14+dfsg-11.21+dfsg-21.21+dfsg-21.27.1covid-19 bio
mummer (PTS, VCS, UP) 3.23+dfsg-83.23+dfsg-83.23+dfsg-84.0.0.~beta5cloud bio
murasaki (PTS, VCS, UP) 1.68.6-131.68.6-141.68.6-141.68.6bio
muscle (PTS, VCS, UP) 5.1.0-15.1.0-15.1.0-15.3bio-phylogeny cloud bio covid-19
muscle3 (PTS, VCS, UP) 3.8.1551-23.8.1551-33.8.1551-33.8.1551bio bio-phylogeny cloud covid-19
mustang (PTS, VCS, UP) 3.2.4-13.2.4-13.2.4-13.2.4cloud bio-phylogeny bio
mview (VCS, UP) 1.67+dfsg1-1bio
nano-snakemake (VCS, UP) 1.0+git20200224.ff11b35-1bio
nanocall (VCS, UP) 0.7.4-1bio
nanocomp (VCS, UP) 1.12.0-1bio
nanofilt (PTS, VCS, UP) 2.8.0-12.8.0-12.8.0-12.8.0covid-19 bio
nanolyse (PTS, VCS, UP) 1.2.0-41.2.0-41.2.0-41.2.0bio covid-19
nanook (PTS, VCS, UP) 1.33+dfsg-51.33+dfsg-61.33+dfsg-61.33covid-19 bio
nanoplot (VCS, UP) 1.36.2-1covid-19 bio
nanopolish (PTS, VCS, UP) 0.14.0-10.14.0-10.14.0-10.14.0covid-19 bio
nanostat (PTS, VCS, UP) 1.4.0-31.4.0-31.4.0bio
nanosv (PTS, VCS, UP) 1.2.4+git20190409.c1ae30c-61.2.4+git20190409.c1ae30c-71.2.4+git20190409.c1ae30c-71.2.4+git20190409.c1ae30cbio covid-19
ncbi-acc-download (PTS, VCS, UP) 0.2.8-10.2.8-30.2.8-30.2.9bio
ncbi-blast+ (PTS, VCS, UP) 2.12.0+ds-32.16.0+ds-62.16.0+ds-62.16.0cloud covid-19 bio
ncbi-entrez-direct (PTS, VCS, UP) 19.0.20230216+dfsg-219.2.20230331+dfsg-319.2.20230331+dfsg-3bio
ncbi-igblast (PTS, VCS, UP) 1.19.0-11.19.0-11.19.0-11.22.0bio
ncbi-magicblast (VCS, UP) 1.5.0+ds-1bio covid-19
ncbi-seg (PTS, VCS, UP) 0.0.20000620-60.0.20000620-70.0.20000620-70.No-Releasebio
ncbi-tools6 (PTS, VCS, UP) 6.1.20170106+dfsg1-106.1.20170106+dfsg2-56.1.20170106+dfsg2-56.1.20170106cloud bio bio-dev
ncbi-vdb (PTS, VCS, UP) 3.0.2+dfsg-23.0.9+dfsg-23.0.9+dfsg-23.1.1+dfsg-13.2.0bio-dev
neobio (PTS, VCS, UP) 0.0.20030929-60.0.20030929-60.0.20030929-60.No-Releasecloud bio
netepi-analysis (VCS, UP) 0.9.0-2epi
netepi-collection (VCS, UP) 1.8.4-2epi
networkx (PTS, VCS, UP) 2.8.8-13.2.1-53.2.1-53.4.2bio-dev
nextflow (VCS, UP) 23.10.1+dfsg-1covid-19
nextstrain-ncov (VCS, UP) 0.0+git20200320.392dc1c-1covid-19
nextsv (VCS, UP) 0.4.0-1bio
nf-core-artic (VCS, UP) 0.0+git20200324.9edd884-1covid-19
ngila (VCS, UP) 1.3-1bio
ngmlr (PTS, VCS, UP) 0.2.7+git20210816.a2a31fb+dfsg-20.2.7+git20210816.a2a31fb+dfsg-20.2.7+git20210816.a2a31fb+dfsg-20.2.7+git20210816.a2a31fb+dfsg-4~0exp0simde0.2.7+git20210816.a2a31fbbio covid-19
ngsqctoolkit (VCS, UP) 2.3.3-1bio
nibabel (PTS, VCS, UP) 5.0.0-25.3.2-25.3.2-25.3.2imaging-dev imaging
nifticlib (PTS, VCS, UP) 3.0.1-93.0.1-9.13.0.1-9.13.0.1imaging-dev imaging
nim-hts (PTS, VCS, UP) 0.3.19+ds-10.3.25+ds-20.3.25bio-dev
nim-kexpr (PTS, VCS, UP) 0.0.2-30.0.2-30.0.2bio-dev
nim-lapper (PTS, VCS, UP) 0.1.7-50.1.7-50.1.7bio-dev
nipy (PTS, VCS, UP) 0.5.0-70.6.1-10.6.1-10.6.1imaging-dev imaging
nipype (PTS, VCS, UP) 1.8.5-31.9.2-21.9.2-21.9.2imaging imaging-dev
nitime (PTS, VCS, UP) 0.9-50.11-30.11-30.11imaging-dev imaging
njplot (PTS, VCS, UP) 2.4-92.4-92.4-92.4bio-phylogeny bio
node-shiny-server (PTS, VCS, UP) 1.5.20.1002-11.5.20.1002-31.5.20.1002-31.5.23.1030epi covid-19
norsnet (PTS, VCS, UP) 1.0.17-71.0.17-71.0.17-70.No-Sitebio
norsp (PTS, VCS, UP) 1.0.6-71.0.6-71.0.6-70.No-Sitebio
ntcard (PTS, VCS, UP) 1.2.2+dfsg-51.2.2+dfsg-91.2.2+dfsg-91.2.2bio
nthash (PTS, VCS, UP) 2.3.0+dfsg-12.3.0+dfsg-22.3.0+dfsg-22.3.0covid-19
nutsqlite (PTS, VCS, UP) 2.0.6-32.0.6-42.0.6-42.0.6tools
nw-align (VCS, UP) 0.20100803-1bio
nxtrim (PTS, VCS, UP) 0.4.3+dfsg-30.4.3+dfsg-40.4.3+dfsg-40.4.3bio
oases (VCS, UP) 0.2.09-1bio
obitools (PTS, VCS, UP) 1.2.13+dfsg-53.0.1~b26+dfsg-43.0.1~b26+dfsg-43.0.1~b26bio
octave (PTS, VCS, UP) 7.3.0-29.4.0-19.4.0-19.4.0physics
octave-dicom (PTS, VCS, UP) 0.5.1-10.6.1-10.6.1-10.6.1imaging-dev
odil (PTS, VCS, UP) 0.12.2-20.12.2-50.12.2-50.13.0imaging covid-19 imaging-dev
odin (PTS, VCS, UP) 2.0.5-32.0.5-72.0.5-72.0.5imaging-dev imaging
omegamap (VCS, UP) 0.5-1bio
oncofuse (VCS, UP) 1.1.1-1bio covid-19
ont-fast5-api (PTS, VCS, UP) 4.1.1+dfsg-24.1.3+dfsg-14.1.3+dfsg-14.1.3bio-dev
opencfu (PTS, VCS, UP) 4.0.0+dfsg-24.0.0+dfsg-24.0.0+dfsg-24.0.0laboratory
opencv (PTS, VCS, UP) 4.6.0+dfsg-124.10.0+dfsg-34.10.0+dfsg-34.11.0imaging-dev
openelectrophy (VCS, UP) 0.0.svn143imaging
openemr (VCS, UP) 4.2.2+dfsg-1practice
openfreezer (VCS, UP) 20131306-1laboratory
openigtlink (PTS, VCS, UP) 1.11.0-41.11.0-41.11.0-43.0imaging-dev
openmeeg (VCS, UP) 2.4.2-1imaging-dev imaging
openmm (PTS, VCS, UP) 7.7.0+dfsg-98.1.2+dfsg-48.1.2+dfsg-48.2.0bio-dev
openmrs (VCS, UP) 2.5-1his
openms (PTS, VCS, UP) 2.6.0+cleaned1-32.6.0+cleaned1-42.6.0+cleaned1-42.4.0-srcbio bio-dev
openslide (PTS, VCS, UP) 3.4.1+dfsg-63.4.1+dfsg-73.4.1+dfsg-74.0.0imaging imaging-dev
openslide-java (VCS, UP) 0.12.2-1imaging-dev
openslide-python (PTS, VCS, UP) 1.2.0-11.4.1-11.4.1-11.4.1imaging-dev
openwalnut (VCS, UP) imaging
optimir (PTS, VCS, UP) 1.2-11.2-21.2-21.2bio
optitype (VCS, UP) 1.3.2-1covid-19 bio
orthanc (PTS, VCS, UP) 1.10.1+dfsg-2+deb12u11.12.6+dfsg-11.12.6+dfsg-11.12.6imaging covid-19 practice
orthanc-dicomweb (PTS, VCS, UP) 1.7+dfsg-61.18+dfsg-11.18+dfsg-11.18imaging covid-19
orthanc-gdcm (PTS, VCS, UP) 1.5-11.8+dfsg-11.8+dfsg-11.8imaging
orthanc-imagej (PTS, VCS, UP) 1.2+dfsg-31.2+dfsg-41.2+dfsg-4imaging
orthanc-mysql (PTS, VCS, UP) 4.3-35.0+dfsg-15.0+dfsg-1imaging
orthanc-neuro (PTS, VCS, UP) 1.0-11.1+dfsg-11.1+dfsg-11.1imaging psychology
orthanc-postgresql (PTS, VCS, UP) 4.0-75.0+dfsg-35.0+dfsg-37.2imaging
orthanc-python (PTS, VCS, UP) 4.0+ds-15.0+ds-25.0+ds-25.0covid-19
orthanc-webviewer (PTS, VCS, UP) 2.8-22.9+dfsg-12.9+dfsg-12.9imaging
orthanc-wsi (PTS, VCS, UP) 1.1-43.0+dfsg-13.0+dfsg-13.0covid-19 oncology laboratory his practice imaging
oscar (PTS, VCS, UP) 1.4.0-11.5.3-21.5.3-21.5.3practice data tools
paipline (VCS, UP) 0.0+git20180416.062bce7-1bio
pairtools (PTS, VCS, UP) 1.0.2-21.1.3-11.1.3bio covid-19
pal2nal (PTS, VCS, UP) 14.1-314.1-314.1-314.1bio
paleomix (PTS, VCS, UP) 1.3.7-31.3.8-21.3.8-21.3.8bio covid-19
paml (PTS, VCS, UP) 4.9j+dfsg-44.9j+dfsg-64.9j+dfsg-64.9jbio
pangolin (VCS, UP) 4.3.1-1bio covid-19
papyrus (PTS, VCS, UP) 3.7.1+dfsg-53.7.1+dfsg-63.7.1+dfsg-60.No-Siteimaging-dev
paraclu (PTS, VCS, UP) 10-110-110-1cloud bio
parallel-fastq-dump (PTS, VCS, UP) 0.6.7-30.6.7-30.6.7-30.6.7covid-19
parasail (PTS, VCS, UP) 2.6+dfsg-12.6.2+dfsg-22.6.2+dfsg-22.6.2covid-19 bio bio-dev
paraview (PTS, VCS, UP) 5.11.0+dfsg-15.13.2+dfsg-35.13.2+dfsg-35.13.2imaging
parsinsert (PTS, VCS, UP) 1.04-121.04-151.04-151.04bio cloud
parsnp (PTS, VCS, UP) 1.7.4+dfsg-22.0.6+dfsg-12.1.3+dfsg-12.1.3bio
partitionfinder (VCS, UP) 2.1.1+dfsg-1bio
patman (PTS, VCS, UP) 1.2.2+dfsg-81.2.2+dfsg-81.2.2+dfsg-80.No-Trackbio
patristic (VCS, UP) 0.0.20100817-2bio bio-phylogeny
pbbam (PTS, VCS, UP) 2.1.0+dfsg-22.4.0+dfsg-12.4.0+dfsg-12.4.0bio-dev
pbcopper (PTS, VCS, UP) 2.0.0+dfsg-22.3.0+dfsg-22.3.0+dfsg-22.3.0bio-dev
pbdagcon (PTS, VCS, UP) 0.3+git20180411.c14c422+dfsg-80.3+git20180411.c14c422+dfsg-90.3+git20180411.c14c422+dfsg-9bio
pbseqlib (PTS, VCS, UP) 5.3.5+dfsg-45.3.5+dfsg-95.3.5+dfsg-9bio-dev
pbsim (PTS, VCS, UP) 1.0.3+git20180330.e014b1d+dfsg-31.0.3+git20180330.e014b1d+dfsg-31.0.3+git20180330.e014b1d+dfsg-31.0.3+git20180330.e014b1dbio
pbsuite (PTS, VCS, UP) 15.8.24+dfsg-715.8.24+dfsg-815.8.24bio
pcalendar (PTS, VCS, UP) 3.4.1-53.4.1-63.4.1-63.4.1tools
pcma (VCS, UP) 2.0+20040626-1bio
pdb2pqr (PTS, VCS, UP) 3.5.2+dfsg-33.6.1+dfsg-13.6.1+dfsg-13.7.1bio cloud
peptidebuilder (PTS, VCS, UP) 1.1.0-31.1.0-31.1.0-31.1.0bio-dev
perlprimer (PTS, VCS, UP) 1.2.4-21.2.4-21.2.4-21.1.21bio
perm (PTS, VCS, UP) 0.4.0-80.4.0-80.4.0-80.No-Sitecloud bio
pesco (VCS, UP) 1.2-1tools
pftools (PTS, VCS, UP) 3.2.12-13.2.12-13.2.12-13.2.12bio
phast (PTS, VCS, UP) 1.6+dfsg-31.7+dfsg-21.7+dfsg-21.7bio
phipack (PTS, VCS, UP) 0.0.20160614-50.0.20160614-50.0.20160614-50.No-Sitebio
phybin (PTS, VCS, UP) 0.3-60.3-60.3-60.3bio
phylip (PTS, VCS, UP) 3.697+dfsg-23.697+dfsg-43.697+dfsg-4bio bio-phylogeny
phylonium (PTS, VCS, UP) 1.6-11.7-31.7-31.7bio
phylophlan (VCS, UP) 1.1.0-1bio
phyloviz-core (VCS, UP) 0.0.20111121-1bio
phyml (PTS, VCS, UP) 3.3.20220408-33.3.20220408-43.3.20220408-43.3.20220408bio bio-phylogeny cloud
physamp (PTS, VCS, UP) 1.1.0-41.1.0-51.1.0-51.1.0bio
phyutility (PTS, VCS, UP) 2.7.3+dfsg-42.7.3+dfsg-42.7.3+dfsg-42.7.3bio cloud
phyx (PTS, VCS, UP) 1.3+ds-21.3.2+ds-11.3.2+ds-11.3.2bio
picard-tools (PTS, VCS, UP) 2.27.5+dfsg-23.3.0+dfsg-23.3.0+dfsg-23.3.0bio covid-19 bio-ngs cloud
picopore (PTS, VCS, UP) 1.2.0-21.2.0-31.2.0-31.2.0covid-19 bio
pigx-rnaseq (PTS, VCS, UP) 0.1.0-1.10.1.1-10.1.1-10.1.1bio covid-19
pigx-scrnaseq (VCS, UP) 1.1.7+ds-1bio
piler (PTS, VCS, UP) 0~20140707-30~20140707-40~20140707-40.No-Releasebio
pilercr (PTS, VCS, UP) 1.06+dfsg-51.06+dfsg-51.06+dfsg-51.06bio
pilon (PTS, VCS, UP) 1.24-21.24-41.24-41.24bio
pinfish (PTS, VCS, UP) 0.1.0+ds-30.1.0+ds-40.1.0+ds-40.1.0covid-19 bio
pipasic (VCS, UP) 0.0.r15-1bio
pique (PTS, VCS, UP) 1.0-61.0-71.0-71.0bio
pirs (PTS, VCS, UP) 2.0.2+dfsg-112.0.2+dfsg-122.0.2+dfsg-122.0.2bio
pixelmed (PTS, VCS, UP) 20220618+dfsg-120250211+dfsg-120250211+dfsg-1imaging
pizzly (PTS, VCS, UP) 0.37.3+ds-90.37.3+ds-90.37.3+ds-90.37.3+ds-100.37.3bio
placnet (PTS, VCS, UP) 1.04-11.04-11.04-10.No-Trackbio
plasmidid (PTS, VCS, UP) 1.6.5+dfsg-21.6.5+dfsg-21.6.5+dfsg-21.6.5covid-19 bio
plasmidomics (PTS, VCS, UP) 0.2.0-100.2.0-100.2.0-100.No-Trackbio
plasmidseeker (PTS, VCS, UP) 1.3+dfsg-31.3+dfsg-31.3+dfsg-31.3bio
plast (PTS, VCS, UP) 2.3.2+dfsg-102.3.2+dfsg-102.3.2+dfsg-102.3.2bio
plastimatch (PTS, VCS, UP) 1.9.4+dfsg.1-11.10.0+dfsg.1-11.10.0+dfsg.1-11.10.0imaging
plato (VCS, UP) 2.0.0-1bio
plink (PTS, VCS, UP) 1.07+dfsg-41.07+dfsg-41.07+dfsg-41.07bio cloud
plink1.9 (PTS, VCS, UP) 1.90~b6.26-220402-11.90~b7.7-241022-11.90~b7.7-241022-10.No-Trackbio cloud covid-19
plink2 (PTS, VCS, UP) 2.00~a3.5-220809+dfsg-12.00~a6.9-250129+dfsg-12.00~a6.9-250129+dfsg-12.00~a6.9-250129cloud covid-19 bio
plip (PTS, VCS, UP) 2.2.2+dfsg-12.4.0+dfsg-22.4.0+dfsg-22.4.0covid-19 bio
pngquant (PTS, VCS, UP) 2.17.0-12.18.0-12.18.0-12.18.0imaging
poa (PTS, VCS, UP) 2.0+20060928-82.0+20060928-92.0+20060928-102.0cloud bio-phylogeny bio
pomoxis (VCS, UP) 0.3.4-1covid-19 bio
populations (PTS, VCS, UP) 1.2.33+svn0120106+dfsg-61.2.33+svn0120106+dfsg-71.2.33+svn0120106+dfsg-71.2.33bio bio-phylogeny
porechop (PTS, VCS, UP) 0.2.4+dfsg-40.2.4+dfsg-60.2.4+dfsg-60.2.4+dfsg-80.2.4bio covid-19
poretools (PTS, VCS, UP) 0.6.0+dfsg-60.6.0+dfsg-70.6.0+dfsg-70.6.0covid-19 bio
pplacer (PTS, VCS, UP) 1.1~alpha19-81.1~alpha19covid-19 bio bio-phylogeny
praat (PTS, VCS, UP) 6.3.07-16.4.27+dfsg-16.4.27+dfsg-16.4.27psychology
prank (PTS, VCS, UP) 0.0.170427+dfsg-30.0.170427+dfsg-30.0.170427+dfsg-30.0.170427cloud bio
predictnls (PTS, VCS, UP) 1.0.20-81.0.20-81.0.20-80.No-Sitebio
presto (PTS, VCS, UP) 0.7.1-10.7.2-20.7.2-20.7.2bio-dev bio covid-19
prime-phylo (PTS, VCS, UP) 1.0.11-101.0.11-131.0.11-130.No-Sitecloud bio
primer3 (PTS, VCS, UP) 2.6.1-42.6.1-52.6.1-52.6.1bio cloud
prinseq-lite (PTS, VCS, UP) 0.20.4-60.20.4-60.20.4-60.20.4bio covid-19
proalign (PTS, VCS, UP) 0.603-50.603-60.603-60.No-Releasebio-phylogeny bio
probabel (PTS, VCS, UP) 0.5.0+dfsg-60.5.0+dfsg-60.5.0+dfsg-60.5.0cloud bio
probalign (PTS, VCS, UP) 1.4-101.4-101.4-101.4bio-phylogeny bio
probcons (PTS, VCS, UP) 1.12-141.12-141.12-141.12bio bio-phylogeny cloud
proda (PTS, VCS, UP) 1.0-131.0-141.0-141.0bio cloud bio-phylogeny
prodigal (PTS, VCS, UP) 2.6.3-62.6.3-62.6.3-62.6.3bio cloud
profbval (PTS, VCS, UP) 1.0.22-81.0.22-81.0.22-80.No-Sitebio
profisis (PTS, VCS, UP) 1.0.11-71.0.11-71.0.11-70.No-Sitebio
profit (VCS, UP) 3.1-1bio
profnet (PTS, VCS, UP) 1.0.22-81.0.22-81.0.22-80.No-Sitebio
profphd-utils (PTS, VCS, UP) 1.0.10-71.0.10-71.0.10-70.No-Sitebio
proftmb (PTS, VCS, UP) 1.1.12-111.1.12-111.1.12-110.No-Sitebio
progressivemauve (PTS, VCS, UP) 1.2.0+4713+dfsg-51.2.0+4713+dfsg-51.2.0+4713+dfsg-50.No-Releasebio
prokka (PTS, VCS, UP) 1.14.6+dfsg-41.14.6+dfsg-61.14.6+dfsg-61.14.6bio covid-19
propka (PTS, VCS, UP) 3.5.0-13.5.1-23.5.1-23.5.1bio-dev
proteinortho (PTS, VCS, UP) 6.1.7+dfsg-16.3.1+dfsg-16.3.1+dfsg-1bio covid-19
prottest (PTS, VCS, UP) 3.4.2+dfsg-83.4.2+dfsg-83.4.2+dfsg-83.4.2bio bio-phylogeny
provean (PTS, VCS, UP) 1.1.5+ds-21.1.5+ds-21.1.5bio
pscan-chip (PTS, VCS, UP) 1.1-31.1-31.1-30.No-Releasebio
pscan-tfbs (PTS, VCS, UP) 1.2.2-41.2.2-41.2.2-40.No-Releasebio
psignifit (PTS, VCS, UP) 2.5.6-82.5.6-82.5.6-82.5.6psychology
psipred (VCS, UP) 4.01-1bio
psortb (PTS, VCS, UP) 3.0.6+dfsg-33.0.6+dfsg-43.0.6+dfsg-43.0.6bio
pssh2 (VCS, UP) 0.6bio
psychopy (PTS, VCS, UP) 2023.2.4+dfsg-32024.2.5psychology
pufferfish (VCS, UP) 1.8.0+dfsg-1bio
pullseq (PTS, VCS, UP) 1.0.2-41.0.2-51.0.2-5bio
purple (VCS, UP) 0.4.1-1bio
pybel (PTS, VCS, UP) 0.14.10-10.15.5-10.15.5-10.15.5bio bio-dev
pybigwig (PTS, VCS, UP) 0.3.18+dfsg-10.3.23+dfsg-10.3.23+dfsg-10.3.24bio-dev
pychopper (PTS, VCS, UP) 2.7.2-12.7.10-12.7.10covid-19 bio
pycoqc (PTS, VCS, UP) 2.5.2+dfsg-32.5.2+dfsg-42.5.2+dfsg-42.5.2covid-19 bio
pycorrfit (PTS, VCS, UP) 1.1.7+dfsg-21.1.7+nopack-31.1.7+nopack-31.1.7bio
pydicom (PTS, VCS, UP) 2.3.1-12.4.3-12.4.3-13.0.1imaging-dev covid-19 imaging
pyensembl (PTS, VCS, UP) 2.2.4+ds-12.3.13-22.3.13-22.3.13bio
pyfai (PTS, VCS, UP) 0.21.3+dfsg1-42025.01-12023.9.0-1~bpo12+12025.01bio-dev
pyfastx (PTS, VCS, UP) 0.8.4-22.2.0-12.2.0-12.2.0bio bio-dev
pymia (PTS, VCS, UP) 0.1.9-2.10.1.9-2.10.1.9imaging-dev
pymol (PTS, VCS, UP) 2.5.0+dfsg-13.0.0+dfsg-33.0.0+dfsg-33.1.0bio
pynn (PTS, VCS, UP) 0.10.1-20.10.1-40.12.3covid-19
pynwb (PTS, VCS, UP) 2.8.2-22.8.2-23.0.0psychology
pyranges (PTS, VCS, UP) 0.0.111+ds-40.0.111+ds-80.0.111+ds-80.0.111bio bio-dev
pyrle (PTS, VCS, UP) 0.0.33-40.0.33-4.10.0.33-4.1bio
pyscanfcs (PTS, VCS, UP) 0.3.6+ds-40.3.6+ds-50.3.6+ds-50.3.6bio
pysurfer (PTS, VCS, UP) 0.11.0-40.11.2-10.11.2imaging
python-airr (PTS, VCS, UP) 1.3.1-11.5.1-11.5.1-11.5.1bio-dev
python-alignlib (PTS, VCS, UP) 0.1.1+dfsg-20.1.1+dfsg-20.1.1+dfsg-20.1.1bio-dev bio
python-anndata (PTS, VCS, UP) 0.8.0-40.10.6-10.11.3bio-ngs bio-dev bio covid-19
python-bcbio-gff (PTS, VCS, UP) 0.6.9-10.7.1-20.7.1-20.7.1bio-dev
python-bel-resources (PTS, VCS, UP) 0.0.3-40.0.3-40.0.3-40.0.3bio-dev
python-bids-validator (PTS, VCS, UP) 1.9.9-11.14.6-11.14.6-11.14.6psychology
python-bioblend (PTS, VCS, UP) 1.0.0-11.2.0-21.2.0-21.4.0bio-dev
python-bioframe (PTS, VCS, UP) 0.3.3-20.4.1-20.4.1-20.7.2bio-dev
python-biom-format (PTS, VCS, UP) 2.1.12-32.1.16-12.1.16-12.1.16covid-19 bio-dev
python-biopython (PTS, VCS, UP) 1.80+dfsg-41.85+dfsg-21.85+dfsg-21.85covid-19 bio-dev cloud
python-biotools (PTS, VCS, UP) 1.2.12-51.2.12-61.2.12-61.2.12bio-dev
python-bx (PTS, VCS, UP) 0.9.0-10.13.0-10.13.0-10.13.0bio-dev covid-19
python-cgecore (PTS, VCS, UP) 1.5.6+ds-11.5.6+ds-21.5.6+ds-22.0.0covid-19 bio-dev bio
python-cgelib (PTS, VCS, UP) 0.7.3-20.7.3-30.7.3-30.7.5bio-dev
python-cigar (PTS, VCS, UP) 0.1.3-20.1.3-20.1.3-20.1.3bio-dev
python-cobra (PTS, VCS, UP) 0.26.2-10.29.1-10.29.1bio-dev
python-cogent (PTS, VCS, UP) 2023.2.12a1+dfsg-2+deb12u12024.5.7a1+dfsg-32024.12.19a2bio-dev cloud covid-19 bio
python-cooler (PTS, VCS, UP) 0.9.1-10.10.3-10.10.3-10.10.3covid-19 bio-dev
python-csb (PTS, VCS, UP) 1.2.5+dfsg-81.2.5+dfsg-101.2.5+dfsg-101.2.5bio bio-dev
python-cutadapt (PTS, VCS, UP) 4.2-14.7-24.7-25.0covid-19 bio bio-dev
python-deeptools (PTS, VCS, UP) 3.5.1-33.5.6+dfsg-13.5.6+dfsg-13.5.6bio bio-dev
python-deeptoolsintervals (PTS, VCS, UP) 0.1.9-30.1.9-30.1.9-30.1.9bio-dev bio
python-dendropy (PTS, VCS, UP) 4.5.2-14.6.1-24.6.1-25.0.1bio bio-dev
python-depinfo (PTS, VCS, UP) 2.2.0-12.2.0-32.2.0-32.2.0rc3covid-19
python-dicompylercore (PTS, VCS, UP) 0.5.5-50.5.6-30.5.6-30.5.6oncology
python-dnaio (PTS, VCS, UP) 0.10.0-11.2.3-11.2.3-11.2.3bio-dev
python-epimodels (PTS, VCS, UP) 0.4.0-10.4.0-40.4.0-40.4.3epi
python-ete3 (PTS, VCS, UP) 3.1.2+dfsg-33.1.3+dfsg-33.1.3+dfsg-33.1.3bio-dev
python-etelemetry (PTS, VCS, UP) 0.3.0-30.3.1-10.3.1-10.3.1covid-19
python-fitbit (PTS, VCS, UP) 0.3.1-30.3.1-50.3.1-50.3.1tools
python-freecontact (PTS, VCS, UP) 1.1-61.1-91.1-90.No-Sitebio-dev
python-geneimpacts (PTS, VCS, UP) 0.3.7-40.3.7-50.3.7-50.3.7bio
python-gffutils (PTS, VCS, UP) 0.11.1-30.13-20.13-20.13bio covid-19 bio-dev
python-gtfparse (PTS, VCS, UP) 1.3.0+ds-11.3.0+ds-21.3.0+ds-22.5.0bio-dev
python-hl7 (PTS, VCS, UP) 0.4.5-10.4.5-30.4.5-30.4.5data
python-imageio (PTS, VCS, UP) 2.4.1-52.37.0-12.37.0-12.37.0imaging-dev
python-intervaltree-bio (PTS, VCS, UP) 1.0.1-41.0.1-41.0.1-41.0.1bio-dev
python-loompy (PTS, VCS, UP) 3.0.7+dfsg-23.0.7+dfsg-33.0.8bio bio-dev
python-misopy (VCS, UP) 0.5.4+dfsg-1bio-dev
python-mne (PTS, VCS, UP) 1.3.0+dfsg-11.9.0-11.9.0-11.9.0imaging-dev
python-multipletau (PTS, VCS, UP) 0.3.3+ds-40.4.1+ds-10.4.1+ds-10.4.1physics
python-nanoget (PTS, VCS, UP) 1.16.1-21.19.3-11.19.3-11.19.3bio-dev bio covid-19
python-nanomath (PTS, VCS, UP) 1.2.1+ds-11.2.1+ds-11.2.1+ds-11.4.0covid-19 bio
python-ncls (PTS, VCS, UP) 0.0.63-hotfix+ds-10.0.63-hotfix+ds-10.0.63-hotfix+ds-10.0.63-hotfixbio-dev bio
python-pairix (PTS, VCS, UP) 0.3.7-60.3.8-10.3.8-10.3.9covid-19 bio-dev
python-pangolearn (PTS, VCS, UP) 2022-07-09+dfsg-22022-07-09+dfsg-22022-07-09+dfsg-22022-07-09bio-dev
python-parasail (PTS, VCS, UP) 1.3.3-11.3.3-11.3.3-11.3.3bio-dev
python-pauvre (PTS, VCS, UP) 0.2.3-20.2.3-40.2.3-40.2.3covid-19
python-pbcommand (PTS, VCS, UP) 2.1.1+git20220616.3f2e6c2-22.1.1+git20231020.28d1635-12.1.1+git20231020.28d1635covid-19 bio-dev
python-pbcore (PTS, VCS, UP) 2.1.2+dfsg-52.1.2+dfsg-112.1.2covid-19 bio-dev
python-py2bit (PTS, VCS, UP) 0.3.1-10.3.3-10.3.3-10.3.3bio bio-dev
python-pyani (PTS, VCS, UP) 0.2.12-20.2.12-30.2.12-30.2.13.1bio-dev covid-19
python-pybedtools (PTS, VCS, UP) 0.9.0-40.10.0-40.10.0-40.11.0bio-dev covid-19 bio
python-pycosat (PTS, VCS, UP) 0.6.4+dfsg-10.6.6+dfsg-20.6.6+dfsg-20.6.6bio-dev
python-pyfaidx (PTS, VCS, UP) 0.7.1-20.8.1.3-10.8.1.3-10.8.1.3bio covid-19 bio-dev
python-pyflow (PTS, VCS, UP) 1.1.20-4bio-dev bio
python-pymummer (PTS, VCS, UP) 0.11.0-30.11.0-50.11.0-50.11.0bio-dev
python-pysam (PTS, VCS, UP) 0.20.0+ds-30.23.0+ds-10.23.0+ds-10.23.0bio-dev bio covid-19
python-pyspoa (PTS, VCS, UP) 0.0.8-30.2.1-20.2.1-20.2.1bio-dev
python-pyvcf (PTS, VCS, UP) 0.6.8+git20170215.476169c-90.6.8+git20170215.476169c-110.6.8+git20170215.476169c-110.6.8+git20170215.476169cbio covid-19 bio-dev
python-questplus (PTS, VCS, UP) 2019.4-62023.1-32023.1-32023.1covid-19
python-ruffus (PTS, VCS, UP) 2.8.4-52.8.4-72.8.4-72.8.4bio-dev
python-scanpy (VCS, UP) 1.9.6-1bio-dev covid-19
python-scitrack (PTS, VCS, UP) 2021.5.3-32024.10.8-12024.10.8-12024.10.8covid-19
python-screed (PTS, VCS, UP) 1.0.5-41.1.3-11.1.3-11.1.3covid-19 bio-dev
python-seqcluster (PTS, VCS, UP) 1.2.9+ds-31.2.9+ds-41.2.9+ds-41.2.9bio-dev bio covid-19
python-skbio (PTS, VCS, UP) 0.5.8-40.6.2-40.6.2-40.6.3bio-dev
python-sqt (PTS, VCS, UP) 0.8.0-60.8.0-80.8.0-80.8.0bio-dev bio
python-streamz (PTS, VCS, UP) 0.6.4-10.6.4-20.6.4-20.6.4covid-19 bio-dev
python-tinyalign (PTS, VCS, UP) 0.2.1-10.2.2-10.2.2-10.2.2bio bio-dev covid-19
python-tornado (PTS, VCS, UP) 6.2.0-3+deb12u16.4.2-16.4.2-16.4.2covid-19
python-treetime (PTS, VCS, UP) 0.9.4-10.11.4-10.11.4-10.11.4covid-19 bio bio-dev bio-phylogeny epi
python-wdlparse (PTS, VCS, UP) 0.1.0-30.1.0-30.1.0-30.1.0bio-dev
pytorch (PTS, VCS, UP) 1.13.1+dfsg-42.6.0+dfsg-32.6.0+dfsg-32.6.0bio-dev epi covid-19
pytorch-vision (PTS, VCS, UP) 0.14.1-20.21.0-30.21.0imaging-dev
pyxid (PTS, VCS, UP) 1.0-61.0-61.0-61.0imaging
pyxnat (PTS, VCS, UP) 1.5-21.6.3-11.6.3-11.6.3imaging-dev
q2-alignment (PTS, VCS, UP) 2022.11.1-22024.5.0-12024.10.0bio-dev bio
q2-composition (VCS, UP) 2021.8.0+ds-1bio-dev bio
q2-cutadapt (PTS, VCS, UP) 2022.11.1-22024.5.0-12024.10.0bio bio-dev covid-19
q2-dada2 (PTS, VCS, UP) 2022.11.2-22024.5.0-12024.10.0bio bio-dev
q2-deblur (VCS, UP) 2023.9.0-1bio bio-dev
q2-demux (PTS, VCS, UP) 2022.11.1+dfsg-22024.5.0+dfsg-12024.10.0bio bio-dev
q2-diversity (VCS, UP) 2021.8.0-1bio bio-dev
q2-emperor (PTS, VCS, UP) 2022.11.1-22024.5.0-22024.10.0bio-dev bio
q2-feature-classifier (PTS, VCS, UP) 2022.11.1-22024.2.0-12024.10.0bio bio-dev
q2-feature-table (PTS, VCS, UP) 2022.11.1+dfsg-22024.5.0+dfsg-12024.10.0bio bio-dev covid-19
q2-fragment-insertion (PTS, VCS, UP) 2022.11.1-32024.5.0-12024.10.0bio-dev bio
q2-gneiss (VCS, UP) 2020.11.1-1bio bio-dev
q2-longitudinal (VCS, UP) 2023.9.1+ds-1bio bio-dev
q2-metadata (PTS, VCS, UP) 2022.8.0-12024.5.0+dfsg-12024.10.0bio bio-dev
q2-phylogeny (PTS, VCS, UP) 2022.11.1-32024.5.0-12022.11.1-12024.10.0bio-dev bio
q2-quality-control (PTS, VCS, UP) 2022.11.1-22024.5.0-12024.10.0bio-dev bio
q2-quality-filter (PTS, VCS, UP) 2022.11.1-22024.5.0-12024.10.0covid-19 bio bio-dev
q2-sample-classifier (PTS, VCS, UP) 2022.11.1-32024.5.0-22024.10.0bio-dev bio
q2-taxa (PTS, VCS, UP) 2022.11.1+dfsg-22024.5.0+dfsg-12024.10.0bio bio-dev
q2-types (PTS, VCS, UP) 2022.11.1-22024.5.0-12024.10.0bio-dev bio
q2-vsearch (VCS, UP) 2023.9.0-1bio bio-dev
q2cli (PTS, VCS, UP) 2022.11.1-22024.5.0-22024.10.1bio-dev bio
q2templates (PTS, VCS, UP) 2022.11.1+ds-22024.5.0+ds-32024.5.0+ds-32024.10.0bio-dev bio
qcat (PTS, VCS, UP) 1.1.0-61.1.0-71.1.0-71.1.0covid-19 bio
qcumber (PTS, VCS, UP) 2.3.0-22.3.0-22.3.0-2bio
qiime (PTS, VCS, UP) 2022.11.1-22024.5.0-12024.10.1cloud bio-dev bio
qrisk2 (PTS, VCS, UP) 0.1.20150729-50.1.20150729-70.1.20150729-70.No-Trackpractice
qtlreaper (VCS, UP) 1.1.1-1bio
qtltools (PTS, VCS, UP) 1.3.1+dfsg-41.3.1+dfsg-41.3.1+dfsg-41.3.1bio
qualimap (VCS, UP) 2.2.1+dfsg-1covid-19 bio
quast (VCS, UP) 5.0.2+dfsg-1covid-19 bio
quicktree (PTS, VCS, UP) 2.5-52.5-62.5-62.5bio covid-19 bio-phylogeny
quitcount (PTS, VCS, UP) 3.1.4-33.1.4-43.1.4-43.1.4tools
quorum (PTS, VCS, UP) 1.1.1-71.1.2-21.1.2-21.1.2bio
qutemol (PTS, VCS, UP) 0.4.1~cvs20081111-150.4.1~cvs20081111-150.4.1~cvs20081111-150.4bio
r-base (PTS, VCS, UP) 4.2.2.20221110-24.4.2-14.4.3-14.4.3physics
r-bioc-affxparser (PTS, VCS, UP) 1.70.0-11.78.0-21.78.0-21.78.0bio-dev
r-bioc-affy (PTS, VCS, UP) 1.76.0-11.84.0-21.84.0-21.84.0bio-dev
r-bioc-affyio (PTS, VCS, UP) 1.68.0-11.76.0-21.76.0-21.76.0bio-dev
r-bioc-altcdfenvs (PTS, VCS, UP) 2.60.0-12.68.0-22.68.0-22.68.0bio-dev
r-bioc-annotate (PTS, VCS, UP) 1.76.0+dfsg-11.84.0+dfsg-21.84.0+dfsg-21.84.0bio-dev bio
r-bioc-annotationdbi (PTS, VCS, UP) 1.60.0-11.68.0-21.68.0-21.68.0bio-dev
r-bioc-annotationhub (PTS, VCS, UP) 3.6.0+dfsg-13.14.0+dfsg-23.14.0+dfsg-23.14.0bio bio-dev
r-bioc-aroma.light (PTS, VCS, UP) 3.28.0-13.36.0-23.36.0-23.36.0bio bio-dev
r-bioc-arrayexpress (PTS, VCS, UP) 1.57.0-11.66.0-21.66.0-21.66.0bio-dev
r-bioc-beachmat (PTS, VCS, UP) 2.14.0+ds-12.22.0+ds-22.22.0+ds-22.22.0bio
r-bioc-biobase (PTS, VCS, UP) 2.58.0-22.66.0-22.66.0-22.66.0bio-dev
r-bioc-biocgenerics (PTS, VCS, UP) 0.44.0-20.52.0-20.52.0-20.52.0bio-dev
r-bioc-biocneighbors (PTS, VCS, UP) 1.16.0+ds-12.0.1+ds-22.0.1+ds-22.0.1bio-dev bio
r-bioc-biocsingular (PTS, VCS, UP) 1.14.0+ds-21.22.0+ds-21.22.0+ds-21.22.0bio
r-bioc-biomart (PTS, VCS, UP) 2.54.0+dfsg-12.62.1+dfsg-12.62.1+dfsg-12.62.1bio-dev
r-bioc-biomformat (PTS, VCS, UP) 1.26.0+dfsg-11.34.0+dfsg-21.34.0+dfsg-21.34.0bio-dev
r-bioc-biostrings (PTS, VCS, UP) 2.66.0-12.74.1+dfsg-22.74.1+dfsg-22.74.1bio bio-dev
r-bioc-biovizbase (PTS, VCS, UP) 1.46.0-11.54.0-21.54.0-21.54.0bio-dev
r-bioc-bridgedbr (VCS, UP) 2.4.0+dfsg-1bio-dev
r-bioc-bsgenome (PTS, VCS, UP) 1.66.3-11.74.0-21.74.0-21.74.0bio-dev
r-bioc-cner (PTS, VCS, UP) 1.34.0+dfsg-11.42.0+dfsg-21.42.0+dfsg-21.42.0bio-dev bio
r-bioc-complexheatmap (PTS, VCS, UP) 2.14.0+dfsg-12.22.0+dfsg-22.22.0+dfsg-22.22.0bio-dev
r-bioc-ctc (PTS, VCS, UP) 1.72.0-11.80.0-21.80.0-21.80.0bio bio-dev
r-bioc-cummerbund (PTS, VCS, UP) 2.40.0-12.48.0-22.48.0-22.48.0bio bio-dev
r-bioc-dada2 (PTS, VCS, UP) 1.26.0+dfsg-11.34.0+dfsg-21.34.0+dfsg-21.34.0bio-dev
r-bioc-deseq2 (PTS, VCS, UP) 1.38.3+dfsg-11.46.0+dfsg-21.46.0+dfsg-21.46.0bio bio-dev
r-bioc-dnacopy (PTS, VCS, UP) 1.72.3-11.80.0-21.80.0-21.80.0bio bio-dev
r-bioc-ebseq (PTS, VCS, UP) 1.38.0-12.4.0-22.4.0-22.4.0bio-dev bio
r-bioc-edger (PTS, VCS, UP) 3.40.2+dfsg-14.4.2+dfsg-14.4.2+dfsg-14.4.2bio bio-ngs cloud statistics
r-bioc-ensembldb (PTS, VCS, UP) 2.22.0+dfsg-12.30.0+dfsg-32.30.0+dfsg-32.30.0bio-dev bio
r-bioc-experimenthub (PTS, VCS, UP) 2.6.0+ds-12.14.0+ds-22.14.0+ds-22.14.0bio
r-bioc-genefilter (PTS, VCS, UP) 1.80.3-11.88.0-21.88.0-21.88.0bio bio-dev
r-bioc-geneplotter (PTS, VCS, UP) 1.76.0-11.84.0+dfsg-21.84.0+dfsg-21.84.0bio bio-dev
r-bioc-genomeinfodb (PTS, VCS, UP) 1.34.9-11.42.3+dfsg-11.42.3+dfsg-11.42.3bio-dev
r-bioc-genomicalignments (PTS, VCS, UP) 1.34.0-11.42.0-21.42.0-21.42.0bio bio-dev
r-bioc-genomicfeatures (PTS, VCS, UP) 1.50.4+dfsg-11.58.0+dfsg-21.58.0+dfsg-21.58.0bio-dev
r-bioc-genomicfiles (PTS, VCS, UP) 1.34.0-11.42.0+dfsg-21.42.0+dfsg-21.42.0bio
r-bioc-genomicranges (PTS, VCS, UP) 1.50.2+dfsg-11.58.0+dfsg-21.58.0+dfsg-21.58.0bio-dev bio
r-bioc-geoquery (PTS, VCS, UP) 2.66.0+dfsg-12.74.0+dfsg-22.74.0+dfsg-22.74.0bio-dev bio
r-bioc-go.db (PTS, VCS, UP) 3.16.0-13.20.0-23.20.0-23.20.0bio-dev bio
r-bioc-graph (PTS, VCS, UP) 1.76.0-21.84.1-11.84.1-11.84.1bio-dev
r-bioc-grohmm (PTS, VCS, UP) 1.32.0-11.40.3-21.40.3-21.40.3bio
r-bioc-gseabase (PTS, VCS, UP) 1.60.0+ds-11.68.0+ds-21.68.0+ds-21.68.0bio-dev
r-bioc-gsva (PTS, VCS, UP) 1.46.0+ds-12.0.5+ds-12.0.5+ds-12.0.5bio-dev
r-bioc-gviz (PTS, VCS, UP) 1.42.1+dfsg-11.50.0+dfsg-21.50.0+dfsg-21.50.0bio-dev bio
r-bioc-hilbertvis (PTS, VCS, UP) 1.56.0-11.64.0-21.64.0-21.64.0cloud bio-ngs bio
r-bioc-htsfilter (PTS, VCS, UP) 1.38.0+dfsg-21.46.0+dfsg-21.46.0+dfsg-21.46.0bio covid-19
r-bioc-hypergraph (PTS, VCS, UP) 1.70.0-11.78.0-21.78.0-21.78.0bio-dev
r-bioc-impute (PTS, VCS, UP) 1.72.3-11.80.0-21.80.0-21.80.0bio bio-dev
r-bioc-iranges (PTS, VCS, UP) 2.32.0-12.40.1-22.40.1-22.40.1bio-dev
r-bioc-isoformswitchanalyzer (PTS, VCS, UP) 1.20.0+ds-12.6.0+ds-22.6.0+ds-22.6.0bio
r-bioc-limma (PTS, VCS, UP) 3.54.1+dfsg-13.62.2+dfsg-13.62.2+dfsg-13.62.2statistics bio covid-19 bio-dev
r-bioc-makecdfenv (PTS, VCS, UP) 1.74.0-11.82.0-21.82.0-21.82.0bio-dev
r-bioc-megadepth (PTS, VCS, UP) 1.8.0+ds-11.16.0+ds-21.16.0+ds-21.16.0bio
r-bioc-mergeomics (PTS, VCS, UP) 1.26.0-11.34.0-21.34.0-21.34.0bio bio-dev
r-bioc-metagenomeseq (PTS, VCS, UP) 1.40.0-11.48.1-11.48.1-11.48.1bio bio-dev
r-bioc-mofa (PTS, VCS, UP) 1.6.1+dfsg-101.6.1+dfsg-151.6.1+dfsg-150.No-Trackbio-dev bio
r-bioc-mofa2 (PTS, VCS, UP) 1.16.0+ds-21.16.0bio
r-bioc-multiassayexperiment (PTS, VCS, UP) 1.24.0+dfsg-21.32.0+dfsg-21.32.0+dfsg-21.32.0bio-dev bio
r-bioc-multtest (PTS, VCS, UP) 2.54.0-12.62.0-22.62.0-22.62.0statistics
r-bioc-mutationalpatterns (PTS, VCS, UP) 3.8.1+dfsg-13.16.0+dfsg-23.16.0+dfsg-23.16.0covid-19 bio
r-bioc-nanostringqcpro (PTS, VCS, UP) 1.30.0-1bio-dev
r-bioc-oligo (PTS, VCS, UP) 1.62.2+ds-11.70.0+ds-21.70.0+ds-21.70.0bio-dev
r-bioc-oligoclasses (PTS, VCS, UP) 1.60.0-11.68.0-21.68.0-21.68.0bio-dev
r-bioc-org.hs.eg.db (PTS, VCS, UP) 3.16.0-13.20.0-33.20.0-33.20.0bio bio-dev
r-bioc-org.mm.eg.db (VCS, UP) 3.11.4-1bio
r-bioc-pcamethods (PTS, VCS, UP) 1.90.0-11.98.0-21.98.0-21.98.0bio bio-dev
r-bioc-phyloseq (PTS, VCS, UP) 1.42.0+dfsg-11.50.0+dfsg-21.50.0+dfsg-21.50.0bio bio-dev
r-bioc-preprocesscore (PTS, VCS, UP) 1.60.2+ds-11.68.0+ds-21.68.0+ds-21.68.0bio-dev
r-bioc-purecn (PTS, VCS, UP) 2.4.0+dfsg-12.12.0+dfsg-22.12.0+dfsg-22.12.0bio-dev
r-bioc-pwmenrich (PTS, VCS, UP) 4.34.0-14.42.0-24.42.0-24.42.0covid-19
r-bioc-qusage (PTS, VCS, UP) 2.32.0-12.40.0-22.40.0-22.40.0bio bio-dev
r-bioc-qvalue (PTS, VCS, UP) 2.30.0-12.38.0-22.38.0-22.38.0statistics
r-bioc-rbgl (PTS, VCS, UP) 1.74.0+dfsg-11.82.0+dfsg-21.82.0+dfsg-21.82.0bio-dev
r-bioc-rcpi (PTS, VCS, UP) 1.34.0+ds-11.42.0+ds-21.42.0+ds-21.42.0covid-19
r-bioc-rgsepd (PTS, VCS, UP) 1.30.0-11.38.0-21.38.0-21.38.0covid-19
r-bioc-rsamtools (PTS, VCS, UP) 2.14.0-12.22.0+dfsg-22.22.0+dfsg-22.22.0covid-19 bio-dev
r-bioc-rsubread (PTS, VCS, UP) 2.12.2-12.20.0-22.20.0-22.20.0covid-19 bio-ngs
r-bioc-rtracklayer (PTS, VCS, UP) 1.58.0-11.66.0-21.66.0-21.66.0bio bio-dev
r-bioc-s4vectors (PTS, VCS, UP) 0.36.1-10.44.0+dfsg-20.44.0+dfsg-20.44.0bio-dev
r-bioc-savr (PTS, VCS, UP) 1.36.0-21.37.0-61.37.0-60.No-Trackbio bio-dev
r-bioc-scater (PTS, VCS, UP) 1.26.1+ds-11.34.0+ds-21.34.0+ds-21.34.0bio
r-bioc-shortread (PTS, VCS, UP) 1.56.1-11.64.0-31.64.0-31.64.0bio-dev
r-bioc-singlecellexperiment (PTS, VCS, UP) 1.20.0+ds-11.28.1+ds-21.28.1+ds-21.28.1bio
r-bioc-snpstats (PTS, VCS, UP) 1.48.0+dfsg-11.56.0+dfsg-21.56.0+dfsg-21.56.0bio-dev
r-bioc-structuralvariantannotation (PTS, VCS, UP) 1.13.0+ds-11.22.0+ds-21.22.0+ds-21.22.0bio bio-dev
r-bioc-tcgabiolinks (PTS, VCS, UP) 2.25.3+dfsg-12.34.0+dfsg-22.34.0+dfsg-22.34.0covid-19
r-bioc-tfbstools (PTS, VCS, UP) 1.36.0+dfsg-21.44.0+dfsg-21.44.0+dfsg-21.44.0bio-dev bio
r-bioc-titancna (PTS, VCS, UP) 1.36.0-11.44.0-21.44.0-21.44.0bio-dev
r-bioc-tximport (PTS, VCS, UP) 1.26.1+dfsg-11.34.0+dfsg-21.34.0+dfsg-21.34.0bio-dev bio
r-bioc-variantannotation (PTS, VCS, UP) 1.44.1-11.52.0-21.52.0-21.52.0bio-dev
r-bioc-xvector (PTS, VCS, UP) 0.38.0-10.46.0-20.46.0-20.46.0bio-dev
r-cran-ade4 (PTS, VCS, UP) 1.7-22-11.7-23-11.7-23-11.7-23statistics
r-cran-adegenet (PTS, VCS, UP) 2.1.10-12.1.11-12.1.11-12.1.11bio bio-dev
r-cran-adephylo (PTS, VCS, UP) 1.1-13-11.1-16-11.1-16-11.1-16bio bio-dev
r-cran-alakazam (PTS, VCS, UP) 1.2.1-11.3.0-11.3.0-11.3.0-2~0exp01.3.0bio covid-19
r-cran-amap (PTS, VCS, UP) 0.8-19-10.8-20-20.8-20-20.8-20bio bio-dev
r-cran-ape (PTS, VCS, UP) 5.7-15.8-1-15.8-1-15.8-1bio
r-cran-beeswarm (PTS, VCS, UP) 0.4.0-10.4.0-10.4.0-10.4.0statistics
r-cran-bio3d (PTS, VCS, UP) 2.4-4-12.4-5-12.4-5-12.4-5bio
r-cran-biwt (PTS, VCS, UP) 1.0.1-11.0.1-11.0.1-11.0.1bio bio-dev
r-cran-boolnet (PTS, VCS, UP) 2.1.7-12.1.9-12.1.9-12.1.9bio bio-dev
r-cran-cmprsk (PTS, VCS, UP) 2.2-11-12.2-12-12.2-12-12.2-12epi
r-cran-corrplot (PTS, VCS, UP) 0.92-10.95-10.95-10.95bio-dev bio
r-cran-covid19 (VCS, UP) 0.2.1-1epi covid-19
r-cran-covid19us (PTS, VCS, UP) 0.1.9-10.1.9-10.1.9-10.1.9epi covid-19
r-cran-diagnosismed (PTS, VCS, UP) 0.2.3-70.2.3-70.2.3-70.2.3covid-19 epi
r-cran-distory (PTS, VCS, UP) 1.4.4-11.4.5-11.4.5-11.4.5bio-dev bio
r-cran-dosefinding (PTS, VCS, UP) 1.0-3-11.2-1-11.2-1-11.2-1pharmacy
r-cran-drinsight (VCS, UP) 0.1.1-1bio bio-dev
r-cran-dt (PTS, VCS, UP) 0.27+dfsg-10.33+dfsg-10.33+dfsg-10.33bio-dev
r-cran-dynamictreecut (PTS, VCS, UP) 1.63-1-31.63-1-31.63-1-31.63-1bio-dev bio
r-cran-epi (PTS, VCS, UP) 2.47-12.59-12.59-12.59covid-19 epi
r-cran-epibasix (PTS, VCS, UP) 1.5-21.5-21.5-21.5epi covid-19
r-cran-epicalc (PTS, VCS, UP) 2.15.1.0-52.15.1.0-52.15.1.0-52.15.1.0covid-19 epi
r-cran-epiestim (PTS, VCS, UP) 2.2-4+dfsg-12.2-4+dfsg-12.2-4+dfsg-12.2-4epi covid-19
r-cran-epir (PTS, VCS, UP) 2.0.57+dfsg-12.0.80+dfsg-12.0.80+dfsg-12.0.80covid-19 epi bio
r-cran-epitools (PTS, VCS, UP) 0.5-10.1-20.5-10.1-20.5-10.1-20.5-10.1epi covid-19
r-cran-fastcluster (PTS, VCS, UP) 1.2.3-21.2.6-21.2.6-21.2.6bio-dev
r-cran-fitbitscraper (PTS, VCS, UP) 0.1.8-60.1.8-60.1.8-60.1.8tools
r-cran-fitcoach (PTS, VCS, UP) 1.0-41.0-41.0tools
r-cran-fitdistrplus (PTS, VCS, UP) 1.1-8-11.2-2-11.2-2-11.2-2bio-dev bio
r-cran-forecast (PTS, VCS, UP) 8.20-18.23.0-18.23.0-18.23.0bio-dev bio
r-cran-future.apply (PTS, VCS, UP) 1.10.0+dfsg-11.11.3+dfsg-11.11.3+dfsg-11.11.3bio-dev
r-cran-future.batchtools (PTS, VCS, UP) 0.12.0+dfsg-10.12.1+dfsg-10.12.1+dfsg-10.12.1bio-dev
r-cran-genabel (PTS, VCS, UP) 1.8-0-61.8-0-71.8-0-71.8-0bio
r-cran-genetics (PTS, VCS, UP) 1.3.8.1.3-11.3.8.1.3-11.3.8.1.3-11.3.8.1.3bio-dev
r-cran-gprofiler2 (PTS, VCS, UP) 0.2.1+dfsg-10.2.3+dfsg-10.2.3+dfsg-10.2.3bio bio-dev
r-cran-haplo.stats (PTS, VCS, UP) 1.9.3-11.9.7-11.9.7-11.9.7bio-dev
r-cran-hms (PTS, VCS, UP) 1.1.2-11.1.3-11.1.3-11.1.3covid-19
r-cran-ica (PTS, VCS, UP) 1.0-3-11.0-3-11.0-3-11.0-3bio-dev
r-cran-incidence (PTS, VCS, UP) 1.7.3-11.7.5-11.7.5-11.7.5covid-19 epi
r-cran-itertools (PTS, VCS, UP) 0.1-3-30.1-3-30.1-3-30.1-3bio-dev
r-cran-kaos (PTS, VCS, UP) 0.1.2-20.1.2-20.1.2-20.1.2bio bio-dev
r-cran-kernelheaping (PTS, VCS, UP) 2.3.0-12.3.0-12.3.0-12.3.0covid-19 epi
r-cran-lexrankr (PTS, VCS, UP) 0.5.2-80.5.2-80.5.2-80.5.2epi covid-19
r-cran-medadherence (PTS, VCS, UP) 1.03-61.03-61.03-61.03practice
r-cran-mediana (PTS, VCS, UP) 1.0.8-31.0.8-31.0.8-31.0.8covid-19
r-cran-metap (PTS, VCS, UP) 1.8-11.11-21.11-21.11bio-dev
r-cran-minerva (PTS, VCS, UP) 1.5.10-11.5.10-11.5.10-11.5.10bio-dev bio
r-cran-msm (PTS, VCS, UP) 1.7-11.8.2-11.8.2-11.8.2covid-19 epi
r-cran-natserv (PTS, VCS, UP) 1.0.0+dfsg-11.0.0+dfsg-11.0.0+dfsg-11.0.0bio-dev
r-cran-nmf (PTS, VCS, UP) 0.25-10.28-10.28-10.28bio-dev
r-cran-optimalcutpoints (PTS, VCS, UP) 1.1-5-11.1-5-11.1-5-11.1-5bio-dev bio
r-cran-parmigene (PTS, VCS, UP) 1.1.0-11.1.1-11.1.1-11.1.1bio-dev bio
r-cran-pcapp (PTS, VCS, UP) 2.0-3-12.0-5-12.0-5-12.0-5bio-dev
r-cran-phangorn (PTS, VCS, UP) 2.11.1+dfsg-12.12.1+dfsg-12.12.1+dfsg-12.12.1bio-dev bio
r-cran-pheatmap (PTS, VCS, UP) 1.0.12-21.0.12-21.0.12-21.0.12bio bio-dev
r-cran-phylobase (PTS, VCS, UP) 0.8.10-10.8.12-10.8.12-10.8.12bio-dev
r-cran-phytools (PTS, VCS, UP) 1.5-1-12.4-4-12.4-4-12.4-4bio
r-cran-prevalence (PTS, VCS, UP) 0.4.1-10.4.1-10.4.1-10.4.1epi
r-cran-proc (PTS, VCS, UP) 1.18.0-11.18.5-11.18.5-11.18.5bio-dev
r-cran-pscbs (PTS, VCS, UP) 0.66.0-20.67.0-30.67.0-30.67.0bio-dev bio
r-cran-psy (PTS, VCS, UP) 1.2-11.2-11.2-11.2psychology
r-cran-psych (PTS, VCS, UP) 2.2.9-12.4.12-12.4.12-12.4.12psychology
r-cran-psychometric (PTS, VCS, UP) 2.3-12.4-12.4-12.4psychology
r-cran-psychotree (PTS, VCS, UP) 0.16-0-10.16-1-10.16-1-10.16-1psychology
r-cran-psyphy (PTS, VCS, UP) 0.2-3-10.3-10.3-10.3psychology
r-cran-pvclust (PTS, VCS, UP) 2.2-0-22.2-0-22.2-0-22.2-0cloud statistics
r-cran-qqman (PTS, VCS, UP) 0.1.8+dfsg-10.1.9+dfsg-10.1.9+dfsg-10.1.9bio bio-dev typesetting
r-cran-qtl (PTS, VCS, UP) 1.58-11.70-11.70-11.70bio covid-19 cloud
r-cran-randomforest (PTS, VCS, UP) 4.7-1.1-14.7-1.2-14.7-1.2-14.7-1.2statistics
r-cran-rann (PTS, VCS, UP) 2.6.1-12.6.2-12.6.2-12.6.2bio-dev
r-cran-rcpphnsw (PTS, VCS, UP) 0.4.1+ds-20.6.0+ds-10.6.0+ds-10.6.0bio-dev bio
r-cran-rentrez (PTS, VCS, UP) 1.2.3+dfsg-11.2.3+dfsg-11.2.3+dfsg-11.2.3bio-dev bio
r-cran-rncl (PTS, VCS, UP) 0.8.7-10.8.7-10.8.7-10.8.7bio-dev
r-cran-rnexml (PTS, VCS, UP) 2.4.11+ds-12.4.11+ds-12.4.11+ds-12.4.11bio-dev
r-cran-robustrankaggreg (PTS, VCS, UP) 1.2.1-11.2.1-11.2.1-11.2.1bio-dev
r-cran-rocr (PTS, VCS, UP) 1.0-11-21.0-11-31.0-11-31.0-11bio-dev
r-cran-rook (PTS, VCS, UP) 1.2+dfsg-11.2+dfsg-11.2+dfsg-11.2bio-dev
r-cran-rotl (PTS, VCS, UP) 3.0.14-13.1.0-13.1.0-13.1.0bio-dev bio
r-cran-rpact (PTS, VCS, UP) 3.3.4-14.1.0-14.1.0pharmacy research
r-cran-rsvd (PTS, VCS, UP) 1.0.5-11.0.5-11.0.5-11.0.5bio-dev
r-cran-rwave (PTS, VCS, UP) 2.6-5-12.6-5-12.6-5-12.6-5statistics
r-cran-samr (PTS, VCS, UP) 3.0-23.0-23.0-23.0bio bio-dev
r-cran-sctransform (PTS, VCS, UP) 0.3.5-10.4.1-10.4.1-10.4.1bio-dev bio
r-cran-sdmtools (PTS, VCS, UP) 1.1-221.2-11.1-221.2-11.1-221.2-1bio
r-cran-seqinr (PTS, VCS, UP) 4.2-23-14.2-36-14.2-36-14.2-36bio bio-dev
r-cran-seroincidence (PTS, VCS, UP) 2.0.0-32.0.0-32.0.0-32.0.0epi covid-19
r-cran-seurat (PTS, VCS, UP) 4.3.0-15.2.1-45.2.1-45.2.1bio bio-dev
r-cran-sf (PTS, VCS, UP) 1.0-9+dfsg-11.0-19+dfsg-11.0-19+dfsg-11.0-19covid-19 epi
r-cran-shazam (PTS, VCS, UP) 1.1.2-11.2.0-11.2.0-11.2.0covid-19 bio bio-dev
r-cran-sitmo (PTS, VCS, UP) 2.0.2-12.0.2-12.0.2-12.0.2bio-dev
r-cran-sjplot (PTS, VCS, UP) 2.8.12+dfsg-12.8.16+dfsg-22.8.17covid-19 epi
r-cran-snowfall (PTS, VCS, UP) 1.84-6.2-11.84-6.3-11.84-6.3-11.84-6.3statistics
r-cran-spp (PTS, VCS, UP) 1.16.0-21.16.0-21.16.0-2bio covid-19
r-cran-stringi (PTS, VCS, UP) 1.7.12-11.8.4-11.8.4-11.8.4covid-19
r-cran-surveillance (PTS, VCS, UP) 1.20.3-11.24.1-11.24.1-11.24.1covid-19 epi
r-cran-tcr (PTS, VCS, UP) 2.3.2+ds-12.3.2+ds-12.3.2+ds-1bio
r-cran-tigger (PTS, VCS, UP) 1.0.1-11.1.0-11.1.0-11.1.0covid-19 bio
r-cran-treespace (PTS, VCS, UP) 1.1.4.1+dfsg-11.1.4.3+dfsg-11.1.4.3+dfsg-11.1.4.3bio
r-cran-tsne (PTS, VCS, UP) 0.1-3.1-10.1-3.1-10.1-3.1-10.1-3.1bio-dev bio
r-cran-vegan (PTS, VCS, UP) 2.6-4+dfsg-12.6-8+dfsg-12.6-10+dfsg-12.6-10bio-dev cloud bio
r-cran-venndiagram (PTS, VCS, UP) 1.7.3-11.7.3-11.7.3-11.7.3bio-dev
r-cran-waveslim (PTS, VCS, UP) 1.8.4-11.8.4-11.8.4-11.8.5statistics
r-cran-wavethresh (PTS, VCS, UP) 4.7.2-14.7.3-14.7.3-14.7.3statistics
r-cran-webgestaltr (PTS, VCS, UP) 0.4.5-10.4.6-10.4.6-10.4.6bio-dev bio
r-cran-wgcna (PTS, VCS, UP) 1.72-1-11.73-11.73-11.73bio
r-other-apmswapp (VCS, UP) 1.0-1bio-dev bio
r-other-ascat (PTS, VCS, UP) 3.1.1-13.1.2-13.1.2-13.2.0covid-19 bio
r-other-fastbaps (VCS, UP) 1.0.4-1bio covid-19
r-other-mott-happy (PTS, VCS, UP) 2.4-52.4-52.4-50.No-Sitecloud bio
r-other-rajewsky-dropbead (PTS, VCS, UP) 0.3.1+git20180221.d746c6f+ds-30.3.1+git20180221.d746c6f+ds-30.3.1+git20180221.d746c6f+ds-30.3.1+git20180221.d746c6fbio
racon (PTS, VCS, UP) 1.5.0-31.5.0-31.5.0-31.5.0bio
radiant (PTS, VCS, UP) 2.8.1+dfsg-22.8.1+dfsg-22.8.1+dfsg-22.8.1bio
ragout (PTS, VCS, UP) 2.3-42.3-52.3-52.3bio covid-19
rambo-k (PTS, VCS, UP) 1.21+dfsg-41.21+dfsg-51.21+dfsg-5bio
rampler (PTS, VCS, UP) 2.1.1-12.1.1-12.1.1-12.1.1bio
rapmap (PTS, VCS, UP) 0.15.0+dfsg-30.15.0+dfsg-40.15.0+dfsg-40.15.0bio
rasmol (PTS, VCS, UP) 2.7.6.0-32.7.6.0-32.7.6.0-32.7.6.0bio
raster3d (PTS, VCS, UP) 3.0-7-23.0-7-23.0-7-23.0-7bio cloud
rate4site (PTS, VCS, UP) 3.0.0-83.0.0-83.0.0-80.No-Sitebio
raxml (PTS, VCS, UP) 8.2.12+dfsg-88.2.13+dfsg-18.2.13+dfsg-28.2.13bio
raxml-ng (VCS, UP) 1.0.1-1bio
ray (PTS, VCS, UP) 2.3.1-72.3.1-92.3.1-92.3.1bio
rdkit (PTS, VCS, UP) 202209.3-1202409.4-1202409.5bio-dev
rdp-alignment (PTS, VCS, UP) 1.2.0-81.2.0-81.2.0-81.2.0bio
rdp-classifier (PTS, VCS, UP) 2.10.2-62.10.2-72.10.2-72.10.2bio
rdp-readseq (PTS, VCS, UP) 2.0.2-92.0.2-92.0.2-92.0.2bio
readseq (PTS, VCS, UP) 1-141-151-150.No-Releasecloud bio
readucks (PTS, VCS, UP) 0.0.3-50.0.3-60.0.3covid-19 bio
reapr (PTS, VCS, UP) 1.0.18+dfsg-51.0.18+dfsg-71.0.18+dfsg-71.0.18bio
recan (PTS, VCS, UP) 0.1.5+dfsg-20.5+dfsg-10.5+dfsg-10.5covid-19 bio
relion (PTS, VCS, UP) 3.1.3-33.1.3-43.1.3-45.0.0bio-dev bio
relion-cuda (PTS, VCS, UP) 3.1.3-23.1.3-25.0.0bio
repeatmasker (VCS, UP) 4.0.7-1bio
repeatmasker-recon (PTS, VCS, UP) 1.08-71.08-81.08-8bio
reprof (PTS, VCS, UP) 1.0.1-81.0.1-91.0.1-90.No-Sitebio bio-dev
resfinder (PTS, VCS, UP) 4.3.0-14.4.2-24.4.2-24.6.0bio
resfinder-db (PTS, VCS, UP) 0.0+git20220524.fa32d9a-10.0+git20220524.fa32d9a-10.0+git20220524.fa32d9a-10.0+git20241213.d3b2312bio
rna-star (PTS, VCS, UP) 2.7.10b+dfsg-22.7.11b+dfsg-22.7.11b+dfsg-22.7.11bcovid-19 bio bio-ngs
rnahybrid (PTS, VCS, UP) 2.1.2-72.1.2-82.1.2-80.No-Trackcloud bio
roadtrips (VCS, UP) 2.0+dfsg-1bio
roary (PTS, VCS, UP) 3.13.0+dfsg-13.13.0+dfsg-23.13.0+dfsg-23.13.0bio
rockhopper (PTS, VCS, UP) 2.0.3+dfsg2-32.0.3+dfsg2-52.0.3+dfsg2-52.0.3bio
roguenarok (PTS, VCS, UP) 1.0.1-31.0.1-31.0.1-31.0.1bio
rosa (VCS, UP) 1.0-1covid-19 bio
rsat (VCS, UP) 2016-03-14+dfsg-1bio
rsem (PTS, VCS, UP) 1.3.3+dfsg-21.3.3+dfsg-31.3.3+dfsg-31.3.3bio covid-19
rstudio (VCS, UP) 2022.07.1+554-1statistics
rtax (PTS, VCS, UP) 0.984-80.984-80.984-80.984bio cloud
ruby-bio (PTS, VCS, UP) 2.0.4-12.0.5-12.0.5-12.0.5bio-dev covid-19
ruby-crb-blast (PTS, VCS, UP) 0.6.9-40.6.9-50.6.9-50.6.9bio-dev
ruby-rgfa (PTS, VCS, UP) 1.3.1+dfsg-21.3.1+dfsg-31.3.1+dfsg-31.3.1bio-dev
runcircos-gui (PTS, VCS, UP) 0.0+git20200528.82dda8c-10.0+git20200528.82dda8c-10.0+git20200528.82dda8c-10.0+git20200528.82dda8cbio
sailfish (VCS, UP) 0.10.1+dfsg-1bio covid-19
saint (PTS, VCS, UP) 2.5.0+dfsg-42.5.0+dfsg-42.5.0+dfsg-42.5.0bio
salmid (PTS, VCS, UP) 0.1.23-50.1.23-50.1.23-50.1.23bio
salmon (PTS, VCS, UP) 1.10.1+ds1-11.10.2+ds1-11.10.2+ds1-11.10.3bio covid-19
sambamba (PTS, VCS, UP) 1.0+dfsg-11.0.1+dfsg-21.0.1bio
samblaster (PTS, VCS, UP) 0.1.26-40.1.26-40.1.26-40.1.26bio covid-19
samclip (PTS, VCS, UP) 0.4.0-40.4.0-40.4.0-40.4.0bio covid-19
samtools (PTS, VCS, UP) 1.16.1-11.21-11.21-11.21cloud bio-dev bio-ngs covid-19 bio
samtools-legacy (PTS, VCS, UP) 0.1.19+dfsg-60.1.19+dfsg-60.1.19+dfsg-60.1.19bio-dev
sap (VCS, UP) 1.1.3-1bio
savvy (PTS, VCS, UP) 2.1.0-22.1.0-32.1.0-32.1.0bio-dev bio
sbmltoolbox (PTS, VCS, UP) 4.1.0-54.1.0-5.14.1.0-5.14.1.0bio-dev
scoary (PTS, VCS, UP) 1.6.16-51.6.16-101.6.16-101.6.16bio
scrappie (PTS, VCS, UP) 1.4.2-81.4.2-81.4.2-81.4.2-9~0exp0simde1.4.2covid-19 bio
scrm (PTS, VCS, UP) 1.7.4-11.7.4-21.7.4-21.7.4bio
scythe (PTS, VCS, UP) 0.994+git20141017.20d3cff-30.994+git20141017.20d3cff-50.994+git20141017.20d3cff-50.994+git20141017.20d3cffbio
seaview (PTS, VCS, UP) 5.0.5-25.0.5-25.0.5-25.0.5bio-phylogeny bio
seer (PTS, VCS, UP) 1.1.4-71.1.4-81.1.4-81.1.4bio
segemehl (PTS, VCS, UP) 0.3.4-50.3.4-50.3.4-50.3.4bio
seirsplus (PTS, VCS, UP) 1.0.9-11.0.9-21.0.9-21.0.9covid-19 epi
sepp (PTS, VCS, UP) 4.5.5+dfsg-14.5.5bio covid-19
seq-gen (PTS, VCS, UP) 1.3.4-21.3.4-21.3.4-21.3.5bio
seq-seq-pan (VCS, UP) 1.0.1-1bio
seqan-needle (PTS, VCS, UP) 1.0.1.0.0.git.3011926+ds-41.0.3+ds-11.0.3+ds-11.0.3bio
seqan-raptor (PTS, VCS, UP) 2.0.0.0.git.fecfbca+ds-33.0.1+ds-93.0.1+ds-93.0.1bio
seqan2 (PTS, VCS, UP) 2.4.0+dfsg-152.4.0+dfsg-162.4.0+dfsg-162.5.0~rc3+dfsg-12.5.0bio-dev cloud bio
seqan3 (PTS, VCS, UP) 3.2.0+ds-63.4.0~rc.3+ds-33.4.0~rc.3+ds-33.4.0~rc.3covid-19 bio-dev
seqkit (PTS, VCS, UP) 2.3.1+ds-12.9.0+ds-12.9.0+ds-12.9.0bio covid-19
seqmagick (PTS, VCS, UP) 0.8.4-30.8.6-30.8.6-30.8.6bio covid-19
seqprep (PTS, VCS, UP) 1.3.2-81.3.2-91.3.2-91.3.2bio
seqsero (PTS, VCS, UP) 1.0.1+dfsg-61.0.1+dfsg-61.0.1+dfsg-61.0.1bio
seqtk (PTS, VCS, UP) 1.3-41.4-21.4-21.4bio
seqtools (PTS, VCS, UP) 4.44.1+dfsg-74.44.1+dfsg-7.14.44.1+dfsg-7.14.44.1bio
seqwish (VCS, UP) 0.7.1-1bio covid-19
sga (PTS, VCS, UP) 0.10.15-70.10.15-70.10.15-70.10.15bio
shapeit4 (PTS, VCS, UP) 4.2.2+dfsg-14.2.2+dfsg-14.2.2+dfsg-14.2.2covid-19
shasta (PTS, VCS, UP) 0.11.1-10.12.0-10.12.0-10.12.0-20.14.0bio bio-dev
shovill (PTS, VCS, UP) 1.1.0-91.1.0-91.1.0-91.1.0covid-19 bio
sibelia (PTS, VCS, UP) 3.0.7+dfsg-33.0.7+dfsg-33.0.7+dfsg-33.0.7+dfsg-43.0.7bio
sibsim4 (PTS, VCS, UP) 0.20-50.20-50.20-50.20bio cloud
sickle (PTS, VCS, UP) 1.33+git20150314.f3d6ae3-21.33+git20150314.f3d6ae3-21.33+git20150314.f3d6ae3-21.33+git20150314.f3d6ae3bio
sift (PTS, VCS, UP) 4.0.3b-66.2.1-16.2.1-16.2.1bio
sight (PTS, VCS, UP) 21.1.1-324.1.0-225.0.0-125.0.0imaging imaging-dev
sigma-align (PTS, VCS, UP) 1.1.3-81.1.3-91.1.3-91.1.3cloud bio-phylogeny bio
signalalign (VCS, UP) 0.0+git20170131.3293fad+dfsg-1bio covid-19
sigviewer (PTS, VCS, UP) 0.6.4-30.6.4-30.6.4-30.6.4imaging
sim4 (PTS, VCS, UP) 0.0.20121010-80.0.20121010-80.0.20121010-80.0.20121010bio cloud
simde (PTS, VCS, UP) 0.7.4~rc2-20.8.2-20.8.2-20.8.2-20.8.4~rc1covid-19
simka (PTS, VCS, UP) 1.5.3-71.5.3-81.5.3-81.5.3bio
simrisc (PTS, VCS, UP) 15.00.00-116.02.00-116.02.00-1oncology
sina (VCS, UP) 1.6.1-1bio
sistr (VCS, UP) 1.0.2-1bio
situs (VCS, UP) 2.7.2-1bio
ska (PTS, VCS, UP) 1.0+dfsg-21.0+dfsg-41.0+dfsg-41.0bio
skesa (PTS, VCS, UP) 2.4.0-62.4.0-62.4.0-62.4.0bio
skewer (PTS, VCS, UP) 0.2.2-60.2.2-60.2.2-60.2.2bio
slicer (VCS, UP) 4.10.2-1imaging
smalt (PTS, VCS, UP) 0.7.6-120.7.6-130.7.6-130.7.6cloud bio
smrtanalysis (PTS, VCS, UP) 0~202101120~20210112bio covid-19
snakemake (PTS, VCS, UP) 7.21.0-17.32.4-77.32.4-78.29.0bio-dev covid-19
snap (PTS, VCS, UP) 2013-11-29-112013-11-29-112013-11-29-11cloud bio
snap-aligner (PTS, VCS, UP) 2.0.2+dfsg-12.0.3+dfsg-22.0.3+dfsg-22.0.3bio
sniffles (PTS, VCS, UP) 2.0.7-12.6.0-12.6.0-12.6.0bio
snippy (PTS, VCS, UP) 4.6.0+dfsg-54.6.0+dfsg-54.6.0bio
snp-sites (PTS, VCS, UP) 2.5.1-22.5.1-22.5.1-22.5.1bio bio-dev
snpeff (PTS, VCS, UP) 5.1+d+dfsg-35.2.f+dfsg-15.2.f+dfsg-15.2.fcovid-19 bio
snpomatic (PTS, VCS, UP) 1.0-61.0-71.0-71.0bio
snpsift (PTS, VCS, UP) 5.1+dfsg2-25.2.e+dfsg-25.2.e+dfsg-25.2.fbio covid-19
soapaligner (PTS, VCS, UP) 2.20-52.20-52.20-50.No-Sitebio
soapdenovo (PTS, VCS, UP) 1.05-61.05-61.05-60.No-Releasecloud bio
soapdenovo2 (PTS, VCS, UP) 242+dfsg-3242+dfsg-4242+dfsg-4242cloud bio
soapsnp (PTS, VCS, UP) 1.03-51.03-51.03-50.No-Sitebio
solvate (PTS, VCS, UP) 1.0-31.0-31.0-30.No-Sitebio
sortmerna (PTS, VCS, UP) 4.3.6-24.3.7-24.3.7-24.3.7bio
sourmash (PTS, VCS, UP) 4.8.14-34.8.14-34.8.14bio
spaced (PTS, VCS, UP) 1.2.0-201605+dfsg-31.2.0-201605+dfsg-41.2.0-201605+dfsg-40.No-Releasebio
spades (PTS, VCS, UP) 3.15.5+dfsg-23.15.5+dfsg-84.0.0+dfsg1-24.1.0bio covid-19
spaln (PTS, VCS, UP) 2.4.13f+dfsg-13.0.2+dfsg-23.0.2+dfsg-23.0.6dbio covid-19
sparta (VCS, UP) 1.01+dfsg-1bio
spoa (PTS, VCS, UP) 4.0.8-14.1.4-24.1.4-24.1.4bio-dev bio
sprai (PTS, VCS, UP) 0.9.9.23+dfsg1-20.9.9.23+dfsg1-30.9.9.23+dfsg1-30.No-Sitebio
spread-phy (PTS, VCS, UP) 1.0.7+dfsg-51.0.7+dfsg-51.0.7+dfsg-5bio-phylogeny bio
sra-sdk (PTS, VCS, UP) 3.0.3+dfsg-6~deb12u13.0.9+dfsg-73.0.9+dfsg-73.2.0bio-dev cloud bio-ngs bio
srf (PTS, VCS, UP) 0.1+dfsg-70.1+dfsg-70.1+dfsg-70.1bio-dev
srst2 (PTS, VCS, UP) 0.2.0-90.2.0-130.2.0-130.2.0bio
ssaha (VCS, UP) 3.1c-1bio
ssake (PTS, VCS, UP) 4.0.1-14.0.1-24.0.1-24.0.1cloud bio-ngs bio
ssm (PTS, VCS, UP) 1.4.0-21.4.0-21.4.0-2bio-dev
sspace (PTS, VCS, UP) 2.1.1+dfsg-72.1.1+dfsg-72.1.1+dfsg-72.1.1bio
stacks (PTS, VCS, UP) 2.62+dfsg-12.68+dfsg-22.68+dfsg-22.68bio
staden (PTS, VCS, UP) 2.0.0+b11-42.0.0+b11-52.0.0+b11-52.0.0b11bio
staden-io-lib (PTS, VCS, UP) 1.14.15-11.15.0-1.11.15.0-1.11.15.0cloud covid-19 bio bio-dev
strap (VCS, UP) 1.1.3-1bio
strap-base (VCS, UP) 1.1.3-1bio
streamlit (VCS, UP) 0.56.0-1covid-19
strelka (VCS, UP) 2.9.10+dfsg-1covid-19 bio
stringtie (PTS, VCS, UP) 2.2.1+ds-22.2.1+ds-32.2.1+ds-33.0.0bio covid-19
subread (PTS, VCS, UP) 2.0.3+dfsg-12.0.7+dfsg-12.0.7+dfsg-12.0.8bio
suitename (PTS, VCS, UP) 0.4.130509+git20210223.ebb1325-10.4.130509+git20210223.ebb1325-10.4.130509+git20210223.ebb1325-10.No-Releasebio
sumaclust (PTS, VCS, UP) 1.0.36+ds-21.0.36+ds-41.0.36+ds-4bio covid-19
sumalibs (PTS, VCS, UP) 1.0.36-31.0.36-51.0.36-5bio-dev
sumatra (PTS, VCS, UP) 1.0.36+ds-21.0.36+ds-21.0.36+ds-2bio
surankco (PTS, VCS, UP) 0.0.r5+dfsg-30.0.r5+dfsg-40.0.r5+dfsg-40.0.r5bio
surpyvor (PTS, VCS, UP) 0.5-20.5-20.5-20.5bio
survivor (PTS, VCS, UP) 1.0.7-41.0.7-41.0.7-41.0.7bio
svim (PTS, VCS, UP) 2.0.0-32.0.0-32.0.0-32.0.0bio
swarm-cluster (PTS, VCS, UP) 3.1.2+dfsg-13.1.5+dfsg-23.1.5+dfsg-23.1.5bio
sweed (PTS, VCS, UP) 3.2.1+dfsg-53.2.1+dfsg-63.2.1+dfsg-63.2.1bio
swissknife (PTS, VCS, UP) 1.80-11.80-11.80-1bio-dev
t-coffee (PTS, VCS, UP) 13.45.0.4846264+really13.41.0.28bdc39+dfsg-113.45.0.4846264+really13.41.0.28bdc39+dfsg-113.45.0.4846264+really13.41.0.28bdc39+dfsg-1bio-phylogeny cloud bio
tab2mage (VCS, UP) 20080626-1bio
tacg (VCS, UP) 4.1-1bio
tandem-genotypes (VCS, UP) 1.8.3-1bio
tantan (PTS, VCS, UP) 40-151-151-151bio
teem (PTS, VCS, UP) 1.12.0~20160122-51.12.0~20160122-61.12.0~20160122-61.11.0imaging imaging-dev
tensorflow (PTS, VCS, UP) 2.3.1-1covid-19
terraphast (PTS, VCS, UP) 0.0+git20200413.8af2e4c+dfsg-20.0+git20200413.8af2e4c+dfsg-30.0+git20200413.8af2e4c+dfsg-30.0+git20200413.8af2e4cbio-dev bio
texlive-extra (PTS, VCS, UP) 2022.20230122-42024.20250114-12024.20250114-1typesetting covid-19
thera-pi (VCS, UP) 0.0.0.20130429-1practice
theseus (PTS, VCS, UP) 3.3.0-143.3.0-143.3.0-14cloud bio
thesias (PTS, VCS, UP) 3.1.1-13.1.1-33.1.1-33.1.1covid-19 bio
tiddit (PTS, VCS, UP) 3.5.2+dfsg-13.6.1+dfsg-23.6.1+dfsg-23.9.2covid-19 bio
tide (VCS, UP) 0.0.r15918-1bio
tigr-glimmer (PTS, VCS, UP) 3.02b-63.02b-63.02b-63.02bbio cloud
tigr-glimmer-mg (VCS, UP) 0.3.2-1bio
tipp (PTS, VCS, UP) 1.0+dfsg-31.0covid-19 bio
tm-align (PTS, VCS, UP) 20190822+dfsg-220190822+dfsg-320190822+dfsg-320190822bio bio-phylogeny
tn-seqexplorer (VCS, UP) 1.5+dfsg-1bio
tnseq-transit (PTS, VCS, UP) 3.2.7-13.3.12-13.3.12-13.3.19bio covid-19
toil (PTS, VCS, UP) 5.9.2-2+deb12u16.1.0-48.0.0bio-dev covid-19 bio
tombo (PTS, VCS, UP) 1.5.1-41.5.1-71.5.1-71.5.1bio covid-19
toolz (PTS, VCS, UP) 0.12.0-11.0.0-21.0.0-21.0.0covid-19
tophat-recondition (PTS, VCS, UP) 1.4-31.4-31.4-31.4covid-19 bio
toppred (PTS, VCS, UP) 1.10-101.10-101.10-101.10bio
tortoize (PTS, VCS, UP) 2.0.11-12.0.13-12.0.14bio
trace2dbest (PTS, VCS, UP) 3.0.1-23.0.1-23.0.1-23.0.1bio
tracetuner (PTS, VCS, UP) 3.0.6~beta+dfsg-33.0.6~beta+dfsg-33.0.6~beta+dfsg-33.0.6~betabio
transdecoder (PTS, VCS, UP) 5.0.1-55.7.1-25.7.1-25.7.1bio
transrate-tools (PTS, VCS, UP) 1.0.0-51.0.0-51.0.0-51.0.0bio
transtermhp (PTS, VCS, UP) 2.09-52.09-52.09-52.09bio
tree-puzzle (PTS, VCS, UP) 5.3~rc16+dfsg-95.3~rc16+dfsg-125.3~rc16+dfsg-125.2cloud bio bio-phylogeny
treeview (PTS, VCS, UP) 1.2.0+dfsg-11.2.0+dfsg-21.2.0+dfsg-21.2.1bio bio-phylogeny
treeviewx (PTS, VCS, UP) 0.5.1+git20100823.7e4d0e9-40.5.1+git20100823.7e4d0e9-40.5.1+git20100823.7e4d0e9-40.5.1+git20100823.7e4d0e9bio-phylogeny bio
trf (PTS, VCS, UP) 4.09.1-64.09.1-64.09.1-64.09.1bio
trim-galore (PTS, VCS, UP) 0.6.10-10.6.10-10.6.10-10.6.10bio
trimage (PTS, VCS, UP) 1.0.6-21.0.6-21.0.6-21.0.6imaging
trimmomatic (PTS, VCS, UP) 0.39+dfsg-20.39+dfsg-20.39+dfsg-20.39bio
trinculo (PTS, VCS, UP) 0.96+dfsg-40.96+dfsg-40.96+dfsg-40.96covid-19
trinityrnaseq (PTS, VCS, UP) 2.15.2+dfsg-12.15.2+dfsg-12.15.2bio
trnascan-se (PTS, VCS, UP) 2.0.10+ds-12.0.12+ds-12.0.12+ds-1bio
tryton-modules-health (VCS, UP) 3.0.8-1his
tvc (PTS, VCS, UP) 5.0.3+git20151221.80e144e+dfsg-55.0.3+git20151221.80e144e+dfsg-55.0.3+git20151221.80e144e+dfsg-55.0.3+git20151221.80e144ebio
twopaco (PTS, VCS, UP) 1.0.0+dfsg-11.0.0+dfsg-11.0.0+dfsg-11.1.0bio
uc-echo (PTS, VCS, UP) 1.12-181.12-191.12-191.12bio
ufasta (VCS, UP) 0.0.3+git20190131.85d60d1-1bio covid-19
ugene (PTS, VCS, UP) 51.0+dfsg-351.0+dfsg-352.0bio
umap (VCS, UP) 1.0.0-1bio
umap-learn (PTS, VCS, UP) 0.5.3+dfsg-20.5.4+dfsg-10.5.4covid-19 bio
umis (PTS, VCS, UP) 1.0.8-31.0.9-21.0.9bio covid-19
unc-fish (VCS, UP) 1.0+dfsg-1bio
uncalled (PTS, VCS, UP) 2.2+ds1-12.3+ds-32.3+ds-32.3bio covid-19
unicycler (PTS, VCS, UP) 0.5.0+dfsg-10.5.1+dfsg-30.5.1+dfsg-30.5.1covid-19 bio
unifrac (PTS, VCS, UP) 1.2-31.3-41.3-41.3bio-dev
unifrac-tools (PTS, VCS, UP) 1.2-21.4-31.4-31.4bio-dev
unikmer (PTS, VCS, UP) 0.19.1-10.20.0-10.20.0-10.20.0bio
ushahidi (VCS, UP) 2.7.4-1epi
uw-prism (VCS, UP) 1.5-2-1oncology
vadr (VCS, UP) 1.2.1-1covid-19
varmatch (VCS, UP) 0+git20180126.5c6fed5+dfsg-1bio
varna (PTS, VCS, UP) 3-93+ds-43-93+ds-73-93+ds-73-93bio
varscan (PTS, VCS, UP) 2.4.3+dfsg-42.4.3+dfsg-42.4.3+dfsg-4covid-19 bio
vcfanno (PTS, VCS, UP) 0.3.5+ds-10.3.5+ds-20.3.5+ds-20.3.5bio
vcftools (PTS, VCS, UP) 0.1.16-30.1.16-30.1.16-30.1.16cloud bio bio-ngs
vdjtools (PTS, VCS, UP) 1.2.1+git20190311+repack-11.2.1+git20190311+repack-21.2.1+git20190311+repack-21.2.1bio-dev bio
velvet (PTS, VCS, UP) 1.2.10+dfsg1-81.2.10+dfsg1-91.2.10+dfsg1-91.2.10bio-ngs cloud bio
velvetoptimiser (PTS, VCS, UP) 2.2.6-52.2.6-52.2.6-52.2.6bio
veryfasttree (PTS, VCS, UP) 4.0.4+dfsg-14.0.4+dfsg-14.0.4bio-phylogeny cloud bio
vg (PTS, VCS, UP) 1.59.0+ds-0.11.63.1covid-19 bio
via (VCS, UP) 1.6.0-3.1imaging-dev imaging
vienna-rna (PTS, VCS, UP) 2.5.1+dfsg-12.6.4+dfsg-12.6.4+dfsg-12.7.0bio covid-19
virulencefinder (PTS, VCS, UP) 2.0.4-32.0.5-22.0.5-23.1.0bio
visit (VCS, UP) 2.9.1-1imaging
vista-foia (VCS, UP) 0.20130405-1his
vmatch (PTS, VCS, UP) 2.3.1+dfsg-82.3.1+dfsg-92.3.1+dfsg-92.3.1bio
vmd (VCS, UP) 1.9.1-3bio
volpack (PTS, VCS, UP) 1.0b3-91.0b3-101.0b3-101.0b3imaging-dev
vsearch (PTS, VCS, UP) 2.22.1-12.29.4-12.29.4-12.30.0bio covid-19
vt (PTS, VCS, UP) 0.57721+ds-30.57721+ds-30.57721+ds-30.57721covid-19 bio
vtk-dicom (PTS, VCS, UP) 0.8.14-3.10.8.17-10.8.17-10.8.17imaging imaging-dev
vtk9 (PTS, VCS, UP) 9.1.0+really9.1.0+dfsg2-59.3.0+dfsg1-49.3.0+dfsg1-49.4.1imaging-dev
wham-align (PTS, VCS, UP) 0.1.5-80.1.5-80.1.5-80.1.5bio-ngs bio
wise (PTS, VCS, UP) 2.4.1-232.4.1-252.4.1-252.4.1bio cloud
workrave (PTS, VCS, UP) 1.10.50-31.10.53-11.10.53-11.10.53tools covid-19
wtdbg2 (PTS, VCS, UP) 2.5-92.5-102.5-102.5covid-19
xdffileio (PTS, VCS, UP) 0.3-40.3-40.3-40.No-Releaseimaging-dev
xmedcon (PTS, VCS, UP) 0.23.0-gtk3+dfsg-1+deb12u10.24.0-gtk3+dfsg-20.24.0-gtk3+dfsg-20.25.0-gtk3imaging-dev imaging
xnat (VCS, UP) 1.7.5.1-1cms imaging
xpore (PTS, VCS, UP) 2.1-12.1-22.1-22.1bio
xxsds-dynamic (PTS, VCS, UP) 1.0~alpha.1+git20210426.548c6f7-11.0~alpha.1+git20210426.548c6f7-21.0~alpha.1+git20210426.548c6f7-21.0~alpha.1+git20240520.0540076bio-dev
yaha (PTS, VCS, UP) 0.1.83-30.1.83-30.1.83-30.1.83bio
yanagiba (PTS, VCS, UP) 1.0.0-51.0.0-51.0.0-51.0.0bio covid-19
yanosim (PTS, VCS, UP) 0.1-50.1-60.1-60.1bio covid-19
zodiac-zeden (VCS, UP) 0.6.5-1bio