Summary
microscopy
This metapackage will install all microscopy softwares.
Description
For a better overview of the project's availability as a Debian package, each head row has a color code according to this scheme:
If you discover a project which looks like a good candidate for PAN Blend
to you, or if you have prepared an unofficial Debian package, please do not hesitate to
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Links to other tasks
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PAN Blend microscopy packages
Official Debian packages with high relevance
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gwyddion
Scanning Probe Microscopy visualization and analysis tool
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| Versions of package gwyddion |
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| Release | Version | Architectures |
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| sid | 2.64-1.1 | amd64,arm64,armel,armhf,i386,mips64el,ppc64el,riscv64,s390x |
| bullseye | 2.57-1 | amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x |
| bookworm | 2.62-1 | amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x |
| trixie | 2.64-1 | amd64,arm64,armel,armhf,i386,mips64el,ppc64el,s390x |
| jessie | 2.38-2 | amd64,armel,armhf,i386 |
| stretch | 2.47-1 | amd64,arm64,armel,armhf,i386,mips,mips64el,mipsel,ppc64el,s390x |
| buster | 2.52-1 | amd64,arm64,armhf,i386 |
| upstream | 2.65 |
| Debtags of package gwyddion: |
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| field | physics |
| interface | x11 |
| role | program |
| science | visualisation |
| scope | application |
| uitoolkit | gtk |
| use | analysing, viewing |
| works-with | image, image:raster |
| x11 | application |
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License: DFSG free
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Gwyddion is a modular program for Scanning Probe Microscopy (SPM) data
visualization and analysis. It is primarily intended for analysis of height
field data obtained by microscopy techniques like
- Atomic Force Microscopy (AFM),
- Magnetic Force Microscopy (MFM),
- Scanning Tunneling Microscopy (STM),
- Near-field Scanning Optical Microscopy (SNOM or NSOM)
and others. However, it can be used for arbitrary height field and
image analysis.
This package contains the main application and its modules. It also contains
a GNOME (and Xfce) thumbnailer which creates previews for all file types known
to Gwyddion.
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Official Debian packages with lower relevance
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threeb
3B Microscopy Analysis Software - command-line tool
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| Versions of package threeb |
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| Release | Version | Architectures |
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| trixie | 0.0~git20220106110332.a3144e0-6 | amd64,i386,s390x |
| sid | 0.0~git20220106110332.a3144e0-6 | amd64,i386,riscv64,s390x |
| bookworm | 0.0~git20220106110332.a3144e0-5 | amd64,i386,mipsel,s390x |
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License: DFSG free
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Bayesian analysis of blinking and bleaching, or 3B microscopy, is a
method which analyses data in which many overlapping fluorophores
undergo bleaching and blinking events, giving the structure at
enhanced resolution. By using a Hidden Markov Model (HMM), it allows
useful information to be obtained from data that would be impossible
to analyse with standard localisation analysis techniques.
This package contains the command-line tool.
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