PAN Blend Project
Summary
tomography
Fotoner og neutroner Blend-tomografi (PAN)

Denne metapakke vil installere alle røntgen fotoner og neutroner PAN Blend-tomografipakker.

Description

For a better overview of the project's availability as a Debian package, each head row has a color code according to this scheme:

If you discover a project which looks like a good candidate for PAN Blend to you, or if you have prepared an unofficial Debian package, please do not hesitate to send a description of that project to the PAN Blend mailing list

Links to other tasks

PAN Blend tomography packages

Official Debian packages with high relevance

libufo-bin
Library for high-performance, GPU-based computing - tools
Versions of package libufo-bin
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bullseye0.16.0.52.gbd831ab-1amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
stretch0.13.0-1amd64,arm64,armel,armhf,i386,mips,mips64el,mipsel,ppc64el,s390x
trixie0.16.0.52.gbd831ab-1amd64,arm64,armel,armhf,i386,mips64el,ppc64el,s390x
sid0.16.0.52.gbd831ab-1amd64,arm64,armel,armhf,i386,mips64el,ppc64el,riscv64,s390x
buster0.15.1-1amd64,arm64,armhf,i386
bookworm0.16.0.52.gbd831ab-1amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
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License: DFSG free
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The UFO data processing framework is a C library suited to build general purpose streams data processing on heterogeneous architectures such as CPUs, GPUs or clusters. It is extensively used at the Karlsruhe Institute of Technology for Ultra-fast X-ray Imaging (radiography, tomography and laminography).

A gobject-instrospection binding is also provided to write scripts or user interfaces.

This package contains binaries to run JSON descriptions of task graphs.

mayavi2
videnskabelig visualiseringspakke for 2-D og 3-D data
Versions of package mayavi2
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bookworm4.8.0-2amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
bullseye4.7.1-2amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
trixie4.8.1-3amd64,arm64,armel,armhf,i386,mips64el,ppc64el,s390x
sid4.8.1-4amd64,arm64,armel,armhf,i386,mips64el,ppc64el,riscv64,s390x
stretch4.5.0-1amd64,arm64,armel,armhf,i386,mips,mips64el,mipsel,ppc64el,s390x
buster4.5.0-1amd64,arm64,armhf,i386
jessie4.3.1-3.1amd64,armel,armhf,i386
Debtags of package mayavi2:
develexamples, lang:python
roleprogram
useviewing
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License: DFSG free
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MayaVi2 er et værktøj for flere platforme for 2-D og 3-D videnskabelig datavisualisering. Programmets funktioner inkluderer:

  • Visualisering for skala-, vektor- og tensordata i 2 og 3 dimensioner
  • Nem udarbejdelse af skripter med Python
  • Nem udvidelse via tilpassede kilder, moduler og datafiltre
  • Læser flere filformater: VTK (forældet og XML), PLOT3D, etc.
  • Visualiseringer kan gemmes
  • Optegnede visualiseringer kan gemmes i en række billedformater

MayaVi2 er blevet designet med tanke på skripter og udvidelser. Mens selve mayavi2-programmet kan bruges i sig selv, kan det også bruges som et Envisage-udvidelsesmodul, hvilket gør det muligt at det - som standard - kan indlejres i brugerprogrammer. Alternativt kan det bruges som en visualiseringsmotor for ethvert program.

Denne pakke tilbyder også TVTK, som omslutter VTK-objekter for at tilbyde en Pythonic API, mens den stadig understøtter Traits-attributter og NumPy/SciPy-array. TVTK implementeres hovedsagelig i ren Python med undtagelse af et lille udvidelsesmodul.

Screenshots of package mayavi2
paraview
Parallel visualiseringsprogram
Versions of package paraview
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jessie4.1.0+dfsg+1-1amd64,armel,armhf,i386
stretch5.1.2+dfsg1-2amd64,arm64,armel,armhf,i386,mips,mips64el,mipsel,ppc64el,s390x
buster5.4.1+dfsg4-3.1amd64,arm64,armhf,i386
sid5.11.2+dfsg-6amd64,arm64,i386,ppc64el,riscv64,s390x
bookworm5.11.0+dfsg-1amd64,arm64,i386,ppc64el,s390x
bullseye5.9.0-2amd64,arm64,i386,mips64el,ppc64el,s390x
upstream5.12.0
Debtags of package paraview:
roleprogram
uitoolkitqt
useviewing
Popcon: 154 users (161 upd.)*
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License: DFSG free
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ParaView er et program til flere platforme, udviklet i åben kildekode og designet til at visualisere datasæt med en størrelse der varierer fra lille til meget stor.

  • Udvikl et visualiseringsprogram i åben kildekode og til flere platforme
  • Understøt distribuerede beregningsmodeller til behandling af store datasæt.
  • Opret en åben, fleksibel og intuitiv brugergrænseflade.
  • Udvikl en arkitektur, der kan udvides, baseret på åbne standarder.

ParaView kører på distribueret og delt hukommelse parallelt samt på systemer kun med en processor. Er blevet testet med succes på Windows, Mac OS X, Linux og diverse Unix-arbejdsstationer, klynger og supercomputere. Under motorhjelmen bruger ParaView visualiseringsværktøjssættet da databehandlings- og optegningsmotoren har en brugergrænseflade skrevet med Qt.

python3-skimage
Python 3-moduler for billedbehandling
Versions of package python3-skimage
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sid0.23.1-3all
stretch0.12.3-8all
buster0.14.2-2all
bullseye0.18.1-2all
bookworm0.19.3-8all
trixie0.22.0-3all
jessie0.10.1-2all
experimental0.23.2~rc1-1all
sid0.23.2-1all
Popcon: 79 users (187 upd.)*
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License: DFSG free
Git

Scikit-image er en samling af billedbehandlingsalgoritmer for Python. Samlingen udfører opgaver såsom billedindlæsning, filtrering, morfologi, segmentering, farvekonverteringer og transformationer.

Denne pakke indeholder Python 3-modulet.

Please cite: Stéfan van der Walt, Johannes L. Schönberger, Juan Nunez-Iglesias, François Boulogne, Joshua D. Warner, Neil Yager, Emmanuelle Gouillart, Tony Yu and the scikit-image contributors: scikit-image: Image processing in Python (eprint) PeerJ 2:e453 (2014)
ufo-filters
Sæt af udvidelsesmoduler for ufo-core - kørselstid
Versions of package ufo-filters
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sid0.16.0.159.g483ce16-1amd64,arm64,armel,armhf,i386,mips64el,ppc64el,riscv64,s390x
trixie0.16.0.159.g483ce16-1amd64,arm64,armel,armhf,i386,mips64el,ppc64el,s390x
bookworm0.16.0.159.g483ce16-1amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
bullseye0.16.0.159.g483ce16-1amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
buster0.14.1+dfsg1-2amd64,arm64,armhf,i386
stretch0.13.0+dfsg1-1amd64,arm64,armel,armhf,i386,mips,mips64el,mipsel,ppc64el,s390x
upstream0.16.0.172.g6f43afc
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License: DFSG free
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UFO-databehandlingsrammen er et C-bibliotek egnet til at bygge almene strøms databehandling på heterogene arkitekturer såsom cpu'er, gpu'er eller klynger. Bruges i stor udstrækning af Karlsruhe Institute of Technology for Ultra-fast X-ray Imaging (radiografi, tomografi og laminografi).

Denne pakke indeholder udvidelsesmodulerne average, backproject, bin, blur, buffer, calculate, camera, clip, contrast, crop, denoise, duplicate, fftmult, fft, filter, flatten, flip, forwardproject, gemm, ifft, interpolate, loop, measure, merge, metaballs, monitor, null, opencl, ordfilt, pad, read, reduce, refeed, replicate, rescale, ringwriter, sleep, slice, stack, stdin, stdout, subtract, transpose, write og zeropad.

Debian packages in contrib or non-free

python3-pyhst2-cuda
Python High Speed Tomographic reconstruction
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License: DFSG free, but needs non-free components
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PyHST is a Python program for Tomographic data reconstruction based on direct filtered back-projection algorithm

This is the CUDA version

No known packages available

astra-toolbox
A high-performance GPU MATLAB toolbox for 2D and 3D tomography
License: GPL-3
Debian package not available
freeart
SART reconstruction algorithm
License: LGPL
Debian package not available
imagej-pluggins-tomo
?
License: ?
Debian package not available
pyastra-toolbox
python binding for the astra-toolbox
License: GPL-3
Debian package not available

The PyASTRAToolbox is a Python interface to the ASTRA Toolbox, a tomography toolbox based on high-performance GPU primitives for 2D and 3D tomography.

The Python interface aims to expose all features of the ASTRA toolbox to Python, providing a high-performance tomography toolbox for Python users.

rabbitct
backprojection performance-comparison
License: GPL2+
Debian package not available

RabbitCT provides an open platform for worldwide performance-comparison of backprojection implementations on different architectures using one specific, clinical, high resolution C-arm CT dataset of a rabbit. This includes a sophisticated benchmark interface, a prototype implementation in C++, and image quality measures.

tomographie-preexperiment-data-collector
gather all information from the user that can be
License: GPL2+
Debian package not available

provided prior to the tomography experiment.

tomopy
tomographic data processing and image reconstruction toolbox
License: BSD-3
Debian package not available

TomoPy is a Python toolbox to perform tomographic data processing and image reconstruction tasks at the Advanced Photon Sourc

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