Summary
tomography
This metapackage will install all PAN Blend tomography packages.
Description
For a better overview of the project's availability as a Debian package, each head row has a color code according to this scheme:
If you discover a project which looks like a good candidate for PAN Blend
to you, or if you have prepared an unofficial Debian package, please do not hesitate to
send a description of that project to the PAN Blend mailing list
Links to other tasks
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PAN Blend tomography packages
Official Debian packages with high relevance
libufo-bin
Library for high-performance, GPU-based computing - tools
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Versions of package libufo-bin |
Release | Version | Architectures |
buster | 0.15.1-1 | amd64,arm64,armhf,i386 |
stretch | 0.13.0-1 | amd64,arm64,armel,armhf,i386,mips,mips64el,mipsel,ppc64el,s390x |
bookworm | 0.16.0.52.gbd831ab-1 | amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x |
trixie | 0.16.0.52.gbd831ab-1 | amd64,arm64,armel,armhf,i386,mips64el,ppc64el,riscv64,s390x |
sid | 0.16.0.52.gbd831ab-1 | amd64,arm64,armel,armhf,i386,mips64el,ppc64el,riscv64,s390x |
bullseye | 0.16.0.52.gbd831ab-1 | amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x |
upstream | 0.16.0.53.gce7118b |
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License: DFSG free
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The UFO data processing framework is a C library suited to build
general purpose streams data processing on heterogeneous
architectures such as CPUs, GPUs or clusters. It is extensively used
at the Karlsruhe Institute of Technology for Ultra-fast X-ray Imaging
(radiography, tomography and laminography).
A gobject-instrospection binding is also provided to write scripts or
user interfaces.
This package contains binaries to run JSON descriptions of task graphs.
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mayavi2
Paket zur 2D- oder 3D-Visualisierung von wissenschaftlichen Daten
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Versions of package mayavi2 |
Release | Version | Architectures |
stretch | 4.5.0-1 | amd64,arm64,armel,armhf,i386,mips,mips64el,mipsel,ppc64el,s390x |
buster | 4.5.0-1 | amd64,arm64,armhf,i386 |
bullseye | 4.7.1-2 | amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x |
bookworm | 4.8.0-2 | amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x |
sid | 4.8.2-4 | amd64,arm64,mips64el,ppc64el,riscv64,s390x |
jessie | 4.3.1-3.1 | amd64,armel,armhf,i386 |
Debtags of package mayavi2: |
devel | examples, lang:python |
role | program |
use | viewing |
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License: DFSG free
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MayaVi2 ist ein plattformübergreifendes Werkzeug zur 2D- und
3D-Visualisierung wissenschaftlicher Daten. Die Merkmale:
- Visualisierung von skalaren, vektoriellen und Tensor-Daten in 2 und 3
Dimensionen
- Einfache Skriptmöglichkeit mittels Python
- Einfache Erweiterung mittels externer Quellen, Module und Datenfilter
- Liest einige Datenformate: VTK (alt und XML), PLOT3D, usw.
- Speichert Visualisierungen
- Speichert berechnete Bilder in mehreren Bildformaten.
MayaVi2 wurde hinsichtlich Skriptschnittstelle und Erweiterbarkeit
konzipiert. Während die Anwendung MayaVi2 an sich schon einsetzbar ist,
kann sie auch als ein Envisage-Plugin verwendet werden, was die direkte
Integration in Benutzerprogramme ermöglicht. Alternativ kann sie auch als
Visualisierungs-Engine für beliebige Anwendungen verwendet werden.
Dieses Paket stellt auch eine Hülle für VTK-Objekte bereit (TVTK), um eine
komfortable Python-API zu liefern, wobei Traits-Attribute und
NumPy/SciPy-Arrays unterstützt werden. TVTK ist - bis auf ein kleines
Erweiterungsmodul - in reinem Python implementiert.
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paraview
Parallelvisualisierungs-Anwendung
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Versions of package paraview |
Release | Version | Architectures |
sid | 5.13.2+dfsg-3 | amd64,arm64,i386,riscv64,s390x |
trixie | 5.13.2+dfsg-2 | amd64,arm64,i386,riscv64,s390x |
bookworm | 5.11.0+dfsg-1 | amd64,arm64,i386,ppc64el,s390x |
buster | 5.4.1+dfsg4-3.1 | amd64,arm64,armhf,i386 |
stretch | 5.1.2+dfsg1-2 | amd64,arm64,armel,armhf,i386,mips,mips64el,mipsel,ppc64el,s390x |
jessie | 4.1.0+dfsg+1-1 | amd64,armel,armhf,i386 |
bullseye | 5.9.0-2 | amd64,arm64,i386,mips64el,ppc64el,s390x |
Debtags of package paraview: |
role | program |
uitoolkit | qt |
use | viewing |
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License: DFSG free
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ParaView ist eine quelloffene, Multi-Plattform-Anwendung, konzipiert um
Datensätze unterschiedlichster Größe zu visualisieren. Die Ziele des
ParaView-Projekts:
* Entwickle eine quelloffene, Multi-Plattform-Visualisierungsanwendung.
* Unterstütze verteilt berechnete Modelle, um große Datensätze zu
verarbeiten.
* Erstelle eine offene, flexible und intuitive Benutzerschnittstelle.
* Entwickele eine erweiterbare Architektur, basierend auf offenen
Standards.
ParaView läuft auf verteiltem (distributed) und geteiltem (shared) Speicher
parallel ebenso wie auf Einzelprozessorsystemen und wurde erfolgreich
unter Windows, MacOS X, Linux und verschiedenen Unix-Arbeitsstationen,
Rechner-Clustern und Supercomputern getestet. Unter der Haube gesehen
verwendet ParaView das Visualization Toolkit als Datenverarbeitungs- und
Render-Maschine, und hat eine in Qt programmierte Benutzerschnittstelle.
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python3-skimage
Python 3 modules for image processing
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Versions of package python3-skimage |
Release | Version | Architectures |
sid | 0.25.1-1 | all |
stretch | 0.12.3-8 | all |
buster | 0.14.2-2 | all |
bullseye | 0.18.1-2 | all |
bookworm | 0.19.3-8 | all |
trixie | 0.25.1-1 | all |
jessie | 0.10.1-2 | all |
sid | 0.25.2-1 | all |
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License: DFSG free
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scikit-image is a collection of image processing algorithms for
Python. It performs tasks such as image loading, filtering,
morphology, segmentation, color conversions, and transformations.
This package provides the Python 3 module.
Please cite:
Stéfan van der Walt, Johannes L. Schönberger, Juan Nunez-Iglesias, François Boulogne, Joshua D. Warner, Neil Yager, Emmanuelle Gouillart, Tony Yu and the scikit-image contributors:
scikit-image: Image processing in Python
(eprint)
PeerJ
2:e453
(2014)
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ufo-filters
Set of plugins for ufo-core - runtime
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Versions of package ufo-filters |
Release | Version | Architectures |
sid | 0.16.0.159.g483ce16-1 | amd64,arm64,armel,armhf,i386,mips64el,ppc64el,riscv64,s390x |
trixie | 0.16.0.159.g483ce16-1 | amd64,arm64,armel,armhf,i386,mips64el,ppc64el,riscv64,s390x |
bookworm | 0.16.0.159.g483ce16-1 | amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x |
bullseye | 0.16.0.159.g483ce16-1 | amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x |
buster | 0.14.1+dfsg1-2 | amd64,arm64,armhf,i386 |
stretch | 0.13.0+dfsg1-1 | amd64,arm64,armel,armhf,i386,mips,mips64el,mipsel,ppc64el,s390x |
upstream | 0.16.0.172.g6f43afc |
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License: DFSG free
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The UFO data processing framework is a C library suited to build
general purpose streams data processing on heterogeneous
architectures such as CPUs, GPUs or clusters. It is extensively used
at the Karlsruhe Institute of Technology for Ultra-fast X-ray Imaging
(radiography, tomography and laminography).
This package contains average', backproject', bin', blur', buffer', calculate', camera', clip', contrast', crop', denoise', duplicate',
fftmult', fft', filter', flatten', flip', forwardproject', gemm', ifft', interpolate', loop', measure', merge', metaballs', monitor',
null', opencl', ordfilt', pad', read', reduce', refeed', replicate',
rescale', ringwriter', sleep', slice', stack', stdin', stdout', subtract', transpose', write' and `zeropad' plugins
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Debian packages in contrib or non-free
python3-pyhst2-cuda
Python High Speed Tomographic reconstruction
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Versions of package python3-pyhst2-cuda |
Release | Version | Architectures |
sid | 2020c-7 (contrib) | amd64 |
bookworm | 2020c-7 (contrib) | amd64 |
bullseye | 2020c-1 (contrib) | amd64 |
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License: DFSG free, but needs non-free components
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PyHST is a Python program for Tomographic data reconstruction based
on direct filtered back-projection algorithm
This is the CUDA version
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No known packages available
astra-toolbox
A high-performance GPU MATLAB toolbox for 2D and 3D tomography
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License: GPL-3
Debian package not available
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freeart
SART reconstruction algorithm
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License: LGPL
Debian package not available
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imagej-pluggins-tomo
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License: ?
Debian package not available
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pyastra-toolbox
python binding for the astra-toolbox
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License: GPL-3
Debian package not available
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The PyASTRAToolbox is a Python interface to the ASTRA Toolbox, a
tomography toolbox based on high-performance GPU primitives for 2D
and 3D tomography.
The Python interface aims to expose all features of the ASTRA toolbox
to Python, providing a high-performance tomography toolbox for Python
users.
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rabbitct
backprojection performance-comparison
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License: GPL2+
Debian package not available
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RabbitCT provides an open platform for worldwide
performance-comparison of backprojection implementations on different
architectures using one specific, clinical, high resolution C-arm CT
dataset of a rabbit. This includes a sophisticated benchmark
interface, a prototype implementation in C++, and image quality
measures.
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tomographie-preexperiment-data-collector
gather all information from the user that can be
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License: GPL2+
Debian package not available
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provided prior to the tomography experiment.
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tomopy
tomographic data processing and image reconstruction toolbox
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License: BSD-3
Debian package not available
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TomoPy is a Python toolbox to perform tomographic data processing and
image reconstruction tasks at the Advanced Photon Sourc
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