Help us to see Debian used by medical practitioners and biomedical researchers! Join us on the Salsa page.

Biology development - Quality Assurance

Summary

Autoremovals: 37

Migration issues: 42

CI failures: 111

Install issues: 123

No issues: 138/386

Debian Med packages for development of bioinformatics applications

This metapackage will install Debian packages which might be helpful for development of applications for biological research.

rdkit

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Package marked for automatic removal:

  • Will be removed on: 2024-11-30
  • Bugs leading to autoremoval: #1085248
  • Will result in removal of parmed votca with total popcon score of 0

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Has been trying to migrate for 50 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

Piuparts failed:

pyfai

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Package marked for automatic removal:

  • Will be removed on: 2024-11-13
  • Dependencies leading to autoremoval: h5py silx
  • Bugs in dependencies leading to autoremoval: #1080198 #1085003

Continuous integration (CI) tests are failing:

Piuparts failed:

python-pbcore

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Package marked for automatic removal:

  • Will be removed on: 2024-11-13
  • Dependencies leading to autoremoval: h5py
  • Bugs in dependencies leading to autoremoval: #1080198

Continuous integration (CI) tests are failing:

Piuparts failed:

  • Version: 1.2.7+dfsg-2~bpo8+1
  • Sections: jessie2bpo

python-skbio

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Package marked for automatic removal:

Continuous integration (CI) tests are failing:

Piuparts failed:

r-bioc-cummerbund

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Package marked for automatic removal:

  • Will be removed on: 2024-11-30
  • Dependencies leading to autoremoval: r-cran-dplyr
  • Bugs in dependencies leading to autoremoval: #1072630

Continuous integration (CI) tests are failing:

Piuparts failed:

snakemake

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Package marked for automatic removal:

  • Will be removed on: 2024-11-27
  • Dependencies leading to autoremoval: arcp
  • Bugs in dependencies leading to autoremoval: #1081857

Continuous integration (CI) tests are failing:

Piuparts failed:

  • Version: 3.9.0+dfsg-2~bpo8+1
  • Sections: jessie2bpo

biomaj3

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

Continuous integration (CI) tests are failing:

python-cooler

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2024-11-13
  • Dependencies leading to autoremoval: h5py
  • Bugs in dependencies leading to autoremoval: #1080198

Continuous integration (CI) tests are failing:

python-ete3

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

Continuous integration (CI) tests are failing:

r-bioc-annotationhub

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2024-11-30
  • Dependencies leading to autoremoval: r-cran-dplyr
  • Bugs in dependencies leading to autoremoval: #1072630

Continuous integration (CI) tests are failing:

r-bioc-biomart

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2024-11-30
  • Dependencies leading to autoremoval: r-cran-dplyr
  • Bugs in dependencies leading to autoremoval: #1072630

Continuous integration (CI) tests are failing:

r-bioc-geoquery

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2024-11-30
  • Dependencies leading to autoremoval: r-cran-dplyr
  • Bugs in dependencies leading to autoremoval: #1072630

Continuous integration (CI) tests are failing:

r-bioc-gviz

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2024-11-30
  • Dependencies leading to autoremoval: r-cran-dplyr
  • Bugs in dependencies leading to autoremoval: #1072630

Continuous integration (CI) tests are failing:

r-bioc-mofa

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

Continuous integration (CI) tests are failing:

r-bioc-multiassayexperiment

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2024-11-30
  • Dependencies leading to autoremoval: r-cran-dplyr
  • Bugs in dependencies leading to autoremoval: #1072630

Continuous integration (CI) tests are failing:

r-bioc-structuralvariantannotation

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2024-11-30
  • Dependencies leading to autoremoval: r-cran-dplyr
  • Bugs in dependencies leading to autoremoval: #1072630

Continuous integration (CI) tests are failing:

r-cran-metap

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2024-11-30
  • Dependencies leading to autoremoval: r-cran-dplyr
  • Bugs in dependencies leading to autoremoval: #1072630

Continuous integration (CI) tests are failing:

r-cran-shazam

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2024-11-30
  • Dependencies leading to autoremoval: r-cran-dplyr
  • Bugs in dependencies leading to autoremoval: #1072630

Continuous integration (CI) tests are failing:

cwltool

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ Install/upgrade

Package marked for automatic removal:

  • Will be removed on: 2024-11-27
  • Dependencies leading to autoremoval: arcp
  • Bugs in dependencies leading to autoremoval: #1081857

Piuparts failed:

  • Version: 1.0.20170114120503-1~bpo8+1
  • Sections: jessie2bpo

kineticstools

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ Install/upgrade

Package marked for automatic removal:

  • Will be removed on: 2024-11-15
  • Dependencies leading to autoremoval: h5py
  • Bugs in dependencies leading to autoremoval: #1080198

Piuparts failed:

  • Version: 0.5.1+20150828+git3aa3d96+dfsg-1~bpo8+1
  • Sections: jessie2bpo

r-cran-adegenet

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ Install/upgrade

Package marked for automatic removal:

  • Will be removed on: 2024-11-30
  • Dependencies leading to autoremoval: r-cran-dplyr
  • Bugs in dependencies leading to autoremoval: #1072630

Piuparts failed:

r-cran-adephylo

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ Install/upgrade

Package marked for automatic removal:

  • Will be removed on: 2024-11-30
  • Dependencies leading to autoremoval: r-cran-dplyr
  • Bugs in dependencies leading to autoremoval: #1072630

Piuparts failed:

r-cran-haplo.stats

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ Install/upgrade

Package marked for automatic removal:

  • Will be removed on: 2024-11-30
  • Dependencies leading to autoremoval: r-cran-dplyr
  • Bugs in dependencies leading to autoremoval: #1072630

Piuparts failed:

r-cran-phylobase

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ Install/upgrade

Package marked for automatic removal:

  • Will be removed on: 2024-11-30
  • Dependencies leading to autoremoval: r-cran-dplyr
  • Bugs in dependencies leading to autoremoval: #1072630

Piuparts failed:

libjloda-java

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜‘ Tests missing

Package marked for automatic removal:

Continuous integration (CI) tests are missing.

cwltest

๐Ÿ˜Ÿ Autoremoval

Package marked for automatic removal:

  • Will be removed on: 2024-11-27
  • Dependencies leading to autoremoval: arcp
  • Bugs in dependencies leading to autoremoval: #1081857

ont-fast5-api

๐Ÿ˜Ÿ Autoremoval

Package marked for automatic removal:

  • Will be removed on: 2024-11-13
  • Dependencies leading to autoremoval: h5py
  • Bugs in dependencies leading to autoremoval: #1080198

python-biom-format

๐Ÿ˜Ÿ Autoremoval

Package marked for automatic removal:

  • Will be removed on: 2024-11-13
  • Dependencies leading to autoremoval: h5py
  • Bugs in dependencies leading to autoremoval: #1080198

python-pbcommand

๐Ÿ˜Ÿ Autoremoval

Package marked for automatic removal:

  • Will be removed on: 2024-11-13
  • Dependencies leading to autoremoval: h5py
  • Bugs in dependencies leading to autoremoval: #1080198

r-bioc-biovizbase

๐Ÿ˜Ÿ Autoremoval

Package marked for automatic removal:

  • Will be removed on: 2024-11-30
  • Dependencies leading to autoremoval: r-cran-dplyr
  • Bugs in dependencies leading to autoremoval: #1072630

r-bioc-gsva

๐Ÿ˜Ÿ Autoremoval

Package marked for automatic removal:

  • Will be removed on: 2024-11-30
  • Dependencies leading to autoremoval: r-cran-dplyr
  • Bugs in dependencies leading to autoremoval: #1072630

r-bioc-titancna

๐Ÿ˜Ÿ Autoremoval

Package marked for automatic removal:

  • Will be removed on: 2024-11-30
  • Dependencies leading to autoremoval: r-cran-dplyr
  • Bugs in dependencies leading to autoremoval: #1072630

r-cran-gprofiler2

๐Ÿ˜Ÿ Autoremoval

Package marked for automatic removal:

  • Will be removed on: 2024-11-30
  • Dependencies leading to autoremoval: r-cran-dplyr
  • Bugs in dependencies leading to autoremoval: #1072630

r-cran-rnexml

๐Ÿ˜Ÿ Autoremoval

Package marked for automatic removal:

  • Will be removed on: 2024-11-30
  • Dependencies leading to autoremoval: r-cran-dplyr
  • Bugs in dependencies leading to autoremoval: #1072630

r-cran-sctransform

๐Ÿ˜Ÿ Autoremoval

Package marked for automatic removal:

  • Will be removed on: 2024-11-30
  • Dependencies leading to autoremoval: r-cran-dplyr
  • Bugs in dependencies leading to autoremoval: #1072630

r-cran-webgestaltr

๐Ÿ˜Ÿ Autoremoval

Package marked for automatic removal:

  • Will be removed on: 2024-11-30
  • Dependencies leading to autoremoval: r-cran-dplyr
  • Bugs in dependencies leading to autoremoval: #1072630

unifrac

๐Ÿ˜Ÿ Autoremoval

Package marked for automatic removal:

bioperl-run

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 36 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

Piuparts failed:

python-cogent

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 295 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest, missingbuild
  • Migrates after: numba

Piuparts failed:

q2-dada2

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 215 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-types, qiime

Piuparts failed:

q2cli

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 106 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Migrates after: python3.11_pu, q2-feature-table, qiime

Piuparts failed:

qiime

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 70 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

Piuparts failed:

sra-sdk

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Has been trying to migrate for 18 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest, missingbuild
  • Migrates after: ncbi-vdb

Piuparts failed:

  • Version: 2.8.1-2+dfsg-2~bpo8+1
  • Sections: jessie2bpo

bcbio

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 243 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Migrates after: freebayes, hts-nim-tools, mosdepth

intake

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 218 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

libbio-tools-run-alignment-clustalw-perl

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 36 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends-indep, depends
  • Invalidated by another package
  • Blocked by: bioperl-run

libbio-tools-run-alignment-tcoffee-perl

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 243 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: bioperl-run

nim-hts

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 113 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: nim

python-anndata

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 262 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: python-array-api-compat

python-pyflow

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 27 days.
  • Verdict: Rejected/violates migration policy/introduces a regression

q2-alignment

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 70 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-types, qiime

q2-cutadapt

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 70 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-types, qiime

q2-demux

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 81 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-types, qiime

q2-emperor

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 70 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: qiime
  • Migrates after: q2-types

q2-feature-classifier

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 249 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-feature-table, q2-quality-control, q2-taxa, q2-types, qiime

q2-feature-table

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 70 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-types, qiime

q2-fragment-insertion

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 70 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-types, qiime

q2-phylogeny

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 81 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-alignment, q2-types, qiime

q2-quality-control

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 73 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-feature-table, q2-taxa, qiime

q2-quality-filter

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 70 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-types, qiime

q2-sample-classifier

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 70 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-feature-table, q2-types, qiime

q2-taxa

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 70 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: qiime
  • Migrates after: q2-types

q2-types

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 70 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: qiime

r-cran-seurat

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 127 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

sumalibs

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 73 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

toil

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 112 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

genomicsdb

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest, depends
  • Migrates after: openmpi

libpwiz

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Migration from unstable to testing is blocked:

  • Not in testing for 88 days.
  • Verdict: Rejected/violates migration policy/introduces a regression

Piuparts failed:

Continuous integration (CI) tests are missing.

ncbi-vdb

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Migration from unstable to testing is blocked:

  • Has been trying to migrate for 18 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest, missingbuild
  • Migrates after: mbedtls

Piuparts failed:

  • Version: 2.8.1+dfsg-2~bpo8+1
  • Sections: jessie2bpo

Continuous integration (CI) tests are missing.

libchado-perl

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are failing:

Piuparts failed:

  • Version: 1.23-2
  • Sections: jessie

Continuous integration (CI) tests are missing.

bioperl

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

consensuscore

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

ctdconverter

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

htseq

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

htsjdk

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

libace-perl

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

librcsb-core-wrapper

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

libsbml

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

ncbi-tools6

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

  • Version: 6.1.20170106-2~bpo8+1
  • Sections: jessie2bpo

pbbam

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

python-biopython

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

python-biotools

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

python-freecontact

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

r-bioc-altcdfenvs

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

r-bioc-biocgenerics

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

r-bioc-genomeinfodb

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

r-cran-nmf

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

seqan2

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

  • Version: 2.4.0+dfsg-8~bpo8+1
  • Sections: jessie2bpo

ffindex

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Migration from unstable to testing is blocked:

  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: openmpi

Piuparts failed:

libbio-tools-phylo-paml-perl

๐Ÿ˜Ÿ Migration

Migration from unstable to testing is blocked:

  • Not in testing for 36 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends-indep, depends
  • Invalidated by another package
  • Blocked by: bioperl-run

nim-kexpr

๐Ÿ˜Ÿ Migration

Migration from unstable to testing is blocked:

  • Not in testing for 113 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: nim

nim-lapper

๐Ÿ˜Ÿ Migration

Migration from unstable to testing is blocked:

  • Not in testing for 113 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: nim

python-loompy

๐Ÿ˜Ÿ Migration

Migration from unstable to testing is blocked:

  • Not in testing for 295 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: numba

pytorch

๐Ÿ˜Ÿ Migration

Migration from unstable to testing is blocked:

  • Not in testing for 296 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest, missingbuild
  • Migrates after: openmpi

q2-metadata

๐Ÿ˜Ÿ Migration

Migration from unstable to testing is blocked:

  • Not in testing for 70 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: qiime
  • Migrates after: q2-quality-filter, q2-types

gatb-core

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

golang-github-biogo-hts

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

joypy

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

libbio-db-biofetch-perl

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

libbio-db-embl-perl

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

libbio-db-ncbihelper-perl

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

libgoby-java

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

libzerg-perl

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

pybel

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

pyranges

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

python-airr

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

python-alignlib

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

python-bel-resources

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

python-cgecore

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

python-gtfparse

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

python-pangolearn

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

python-parasail

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

python-pybedtools

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-bioc-annotate

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-bioc-annotationdbi

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-bioc-arrayexpress

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-bioc-biobase

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-bioc-biomformat

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-bioc-bsgenome

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-bioc-complexheatmap

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-bioc-ensembldb

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-bioc-geneplotter

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-bioc-genomicfeatures

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-bioc-go.db

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-bioc-gseabase

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-bioc-hypergraph

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-bioc-metagenomeseq

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-bioc-oligoclasses

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-bioc-org.hs.eg.db

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-bioc-phyloseq

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-bioc-purecn

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-bioc-qusage

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-bioc-s4vectors

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-bioc-tximport

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-cran-phangorn

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-cran-pscbs

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

seqan3

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

shasta

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

unifrac-tools

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-bioc-genomicranges

๐Ÿ˜Ÿ Migration

Migration from unstable to testing is blocked:

  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

r-cran-amap

๐Ÿ˜Ÿ Migration

Migration from unstable to testing is blocked:

  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

bambamc

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

bio-tradis

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

biojava-live

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

hdf5

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

jebl2

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libbio-mage-utils-perl

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libbioparser-dev

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libbpp-core

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libbpp-phyl

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libbpp-phyl-omics

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libbpp-popgen

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libbpp-qt

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libbpp-raa

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libbpp-seq

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libbpp-seq-omics

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libdivsufsort

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libgenome

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libhmsbeagle

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libmems

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

  • Version: 1.6.0+4725-1~bpo8+1
  • Sections: jessie2bpo

Continuous integration (CI) tests are missing.

libmuscle

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libpal-java

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libpsortb

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libseqlib

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

openms

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

pbseqlib

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

  • Version: 0~20161219-1~bpo8+1
  • Sections: jessie2bpo

Continuous integration (CI) tests are missing.

python-cgelib

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

sbmltoolbox

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

srf

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

ssm

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

bamtools

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

biosquid

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

ctdopts

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

fast5

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

fermi-lite

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

freecontact

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

genometools

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

htslib

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

kmer

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

libai-fann-perl

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

libbio-mage-perl

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

libdisorder

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

libedlib

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

libfastahack

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

  • Version: 0.0+20160702-1~bpo8+1
  • Sections: jessie2bpo

libgo-perl

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

libnhgri-blastall-perl

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

librostlab

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

librostlab-blast

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

libsmithwaterman

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

  • Version: 0.0+git20160702.2610e25-4~bpo9+1
  • Sections: stretch2bpo

libsort-key-top-perl

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

libssw

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

libtabixpp

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

libthread-pool

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

libvcflib

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

  • Version: 1.0.0~rc1+dfsg1-6~bpo9+1
  • Sections: stretch2bpo

libzerg

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

mcl

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

minimap2

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

python-cobra

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

python-csb

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

python-cutadapt

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

python-dendropy

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

  • Version: 4.2.0+dfsg-1~bpo8+1
  • Sections: jessie2bpo

python-pyfaidx

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

python-pymummer

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

python-pysam

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

  • Version: 0.9.1.4+ds-1~bpo8+1
  • Sections: jessie2bpo

python-ruffus

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

  • Version: 2.6.3+dfsg-4~bpo8+1
  • Sections: jessie2bpo

r-bioc-affy

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

r-bioc-graph

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

r-bioc-iranges

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

r-bioc-limma

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

r-bioc-snpstats

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

r-cran-boolnet

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

r-cran-distory

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

r-cran-dt

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

r-cran-fastcluster

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

r-cran-genetics

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

r-cran-rncl

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

r-cran-rocr

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

r-cran-seqinr

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

reprof

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

ruby-bio

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

samtools-legacy

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

snp-sites

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

spoa

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

staden-io-lib

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

biojava4-live

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

biojava6-live

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

btllib

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

capsule-maven-nextflow

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

cdk

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

cthreadpool

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

gatk-bwamem

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

gatk-fermilite

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

gatk-native-bindings

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

htscodecs

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

icb-utils

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

libbiosoup-dev

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

libgkarrays

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

libmaus2

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

libqes

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

librdp-taxonomy-tree-java

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

libstatgen

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

libvbz-hdf-plugin

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

libwfa2

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

milib

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

pbcopper

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

python-seqcluster

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

savvy

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

xxsds-dynamic

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.