Biology - QA · Debian Med

emboss-explorer

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Package marked for automatic removal:

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Dependencies leading to autoremoval: emboss
Bugs in dependencies leading to autoremoval: #1096578

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Piuparts failed:

Version: 2.2.0-12
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Continuous integration (CI) tests are missing.

bioxtasraw

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Package marked for automatic removal:

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Dependencies leading to autoremoval: emoslib magics++ pocl portmidi python-xarray
Bugs in dependencies leading to autoremoval: #1096580 #1097351 #1097627 #1097640 #1110804

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 2.3.1-1
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deblur

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Package marked for automatic removal:

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Dependencies leading to autoremoval: mafft rpy2 sortmerna
Bugs in dependencies leading to autoremoval: #1097352 #1097910 #1111088

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Piuparts failed:

Version: 1.1.1-4
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lamassemble

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Bugs in dependencies leading to autoremoval: #1097352

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Piuparts failed:

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metaphlan

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Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

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Piuparts failed:

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optimir

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Dependencies leading to autoremoval: csh emboss mafft
Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

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Piuparts failed:

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r-bioc-mofa

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Package marked for automatic removal:

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Dependencies leading to autoremoval: r-bioc-genomeinfodb r-bioc-rhdf5lib
Bugs in dependencies leading to autoremoval: #1111759 #1111760

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Piuparts failed:

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relion

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Package marked for automatic removal:

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Bugs leading to autoremoval: #1097784

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Piuparts failed:

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snippy

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Package marked for automatic removal:

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Dependencies leading to autoremoval: libace-perl libconvert-binary-c-perl libdbd-pg-perl
Bugs in dependencies leading to autoremoval: #1097160 #1097174 #1097179

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Piuparts failed:

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bio-tradis

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Package marked for automatic removal:

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Dependencies leading to autoremoval: bambamc libace-perl libconvert-binary-c-perl libdbd-pg-perl
Bugs in dependencies leading to autoremoval: #1096356 #1097160 #1097174 #1097179

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artemis

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augur

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Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

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beast2-mcmc

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Package marked for automatic removal:

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Bugs in dependencies leading to autoremoval: #1097627

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biomaj3-daemon

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Bugs in dependencies leading to autoremoval: #1110796 #1110798 #1110800

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cnvkit

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coot

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cutesv

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emperor

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Package marked for automatic removal:

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freecontact

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Package marked for automatic removal:

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Will result in removal of libfreecontact-perl python-freecontact with total popcon score of 0

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gasic

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Package marked for automatic removal:

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Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

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Testsuite: autopkgtest

iva

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Package marked for automatic removal:

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Dependencies leading to autoremoval: bambamc libace-perl libconvert-binary-c-perl libdbd-pg-perl
Bugs in dependencies leading to autoremoval: #1096356 #1097160 #1097174 #1097179

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

kallisto

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Package marked for automatic removal:

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Dependencies leading to autoremoval: csh emboss mafft rpy2 tclx8.4
Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352 #1097972 #1111088

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

kleborate

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Package marked for automatic removal:

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Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

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Testsuite: autopkgtest

pinfish

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Package marked for automatic removal:

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Dependencies leading to autoremoval: racon spoa
Bugs in dependencies leading to autoremoval: #1097767 #1097922

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Testsuite: autopkgtest

prokka

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Package marked for automatic removal:

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Dependencies leading to autoremoval: csh libace-perl libconvert-binary-c-perl libdbd-pg-perl
Bugs in dependencies leading to autoremoval: #1096486 #1097160 #1097174 #1097179

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

provean

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Package marked for automatic removal:

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Dependencies leading to autoremoval: csh
Bugs in dependencies leading to autoremoval: #1096486

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Testsuite: autopkgtest

pymol

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Package marked for automatic removal:

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Dependencies leading to autoremoval: portmidi
Bugs in dependencies leading to autoremoval: #1097640

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python-cgecore

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Dependencies leading to autoremoval: csh emboss mafft
Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

r-bioc-annotate

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Package marked for automatic removal:

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Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-annotationhub

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Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-cummerbund

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Package marked for automatic removal:

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Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-ensembldb

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Package marked for automatic removal:

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Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-experimenthub

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Package marked for automatic removal:

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Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-geneplotter

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Package marked for automatic removal:

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Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-genomicfiles

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Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-geoquery

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Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-go.db

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Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-gviz

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Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-htsfilter

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Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-megadepth

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Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-multiassayexperiment

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Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-mutationalpatterns

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Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-org.hs.eg.db

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Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-phyloseq

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Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-scater

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Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-singlecellexperiment

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Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-structuralvariantannotation

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Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-cran-shazam

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Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-cran-tigger

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Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

rapmap

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Will be removed on: 2025-10-04
Bugs leading to autoremoval: #1097770
Will result in removal of pigx-rnaseq salmon with total popcon score of 0

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

resfinder

😟 Autoremoval

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Package marked for automatic removal:

Will be removed on: 2025-10-05
Dependencies leading to autoremoval: csh emboss mafft
Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

roary

😟 Autoremoval

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Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: csh libace-perl libconvert-binary-c-perl libdbd-pg-perl mafft zoem
Bugs in dependencies leading to autoremoval: #1096486 #1097160 #1097174 #1097179 #1097352 #1098203

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

shasta

😟 Autoremoval

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Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: csh spoa
Bugs in dependencies leading to autoremoval: #1096486 #1097922

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

shovill

😟 Autoremoval

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Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: spades
Bugs in dependencies leading to autoremoval: #1097913

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

sortmerna

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Will be removed on: 2025-10-04
Bugs leading to autoremoval: #1097910
Will result in removal of deblur with total popcon score of 0

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

transdecoder

😟 Autoremoval

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Package marked for automatic removal:

Will be removed on: 2025-10-05
Dependencies leading to autoremoval: csh
Bugs in dependencies leading to autoremoval: #1096486

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

trinityrnaseq

😟 Autoremoval

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Package marked for automatic removal:

Will be removed on: 2025-09-28
Dependencies leading to autoremoval: csh emboss mafft rpy2 tclx8.4
Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352 #1097972 #1111088

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

unicycler

😟 Autoremoval

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Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: csh racon spades spoa
Bugs in dependencies leading to autoremoval: #1096486 #1097767 #1097913 #1097922

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

virulencefinder

😟 Autoremoval

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Package marked for automatic removal:

Will be removed on: 2025-10-05
Dependencies leading to autoremoval: csh emboss mafft
Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

ball

😟 Autoremoval

😟 Install/upgrade

😑 Tests missing

Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: qtwebengine-opensource-src
Bugs in dependencies leading to autoremoval: #1097756

Piuparts failed:

Version: 1.5.0+git20180813.37fc53c-11.1
Sections: sid-broken-symlinks

Continuous integration (CI) tests are missing.

pigx-rnaseq

😟 Autoremoval

😟 Install/upgrade

😑 Tests missing

Package marked for automatic removal:

Will be removed on: 2025-09-28
Dependencies leading to autoremoval: csh emboss mafft r-bioc-genomeinfodb rapmap rpy2 salmon tclx8.4
Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352 #1097770 #1097838 #1097972 #1111088 #1111759

Piuparts failed:

Version: 0.1.0-1.1
Sections: sid-merged-usr

Continuous integration (CI) tests are missing.

ugene

😟 Autoremoval

😟 Install/upgrade

😑 Tests missing

Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: qtwebengine-opensource-src
Bugs in dependencies leading to autoremoval: #1097756

Piuparts failed:

Version: 52.1+dfsg-1
Sections: forky-rcmd

Continuous integration (CI) tests are missing.

fasta3

😟 Autoremoval

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Package marked for automatic removal:

Will be removed on: 2025-09-19
Bugs leading to autoremoval: #1096607

Piuparts failed:

Version: 36.3.8i.14-Nov-2020-3
Sections: sid-broken-symlinks

gbrowse

😟 Autoremoval

😟 Install/upgrade

Package marked for automatic removal:

Will be removed on: 2025-10-06
Dependencies leading to autoremoval: libace-perl libconvert-binary-c-perl libdbd-pg-perl
Bugs in dependencies leading to autoremoval: #1097160 #1097174 #1097179

Piuparts failed:

Version: 2.56+dfsg-12
Sections: sid-broken-symlinks oldstable222sid

mafft

😟 Autoremoval

😟 Install/upgrade

Package marked for automatic removal:

Will be removed on: 2025-10-05
Bugs leading to autoremoval: #1097352
Will result in removal of ampliconnoise arb ariba augur bioperl-run busco cctbx changeo cnvkit cutesv deblur dials elpa-snakemake gasic graphlan gubbins hinge idseq-bench insilicoseq kallisto kaptive kineticstools kleborate lamassemble libbio-tools-phylo-paml-perl libbio-tools-run-alignment-clustalw-perl libbio-tools-run-alignment-tcoffee-perl libobjcryst mcaller mdanalysis metaphlan mirtop nanofilt nanolyse ncbi-acc-download objcryst-fox optimir paleomix parsnp peptidebuilder pigx-rnaseq pizzly presto psortb pyensembl pyfastx pyobjcryst python-bcbio-gff python-biopython python-cai python-cgecore python-cooler python-datacache python-dynasor python-emmet-core python-gffutils python-mp-api python-nanoget python-pauvre python-pbcommand python-pbcore python-prodigy python-pyani python-pyfaidx python-seqcluster python-treetime qcat qcumber recan resfinder roary seqmagick seqsero smrtanalysis snakemake srst2 trinityrnaseq virulencefinder xpore xraylarch yanagiba with total popcon score of 0

Piuparts failed:

Version: 7.525-1
Sections: sid-broken-symlinks

mcaller

😟 Autoremoval

😟 Install/upgrade

Package marked for automatic removal:

Will be removed on: 2025-10-05
Dependencies leading to autoremoval: csh emboss mafft
Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

Piuparts failed:

Version: 1.0.3+git20210624.b415090-3
Sections: sid-broken-symlinks sid-strict sid-nodoc

nanopolish

😟 Autoremoval

😟 Install/upgrade

Package marked for automatic removal:

Will be removed on: 2025-09-19
Bugs leading to autoremoval: #1097430

Piuparts failed:

Version: 0.14.0-1
Sections: oldstable222sid

ncbi-tools6

😟 Autoremoval

😟 Install/upgrade

Package marked for automatic removal:

Will be removed on: 2025-10-05
Dependencies leading to autoremoval: csh
Bugs in dependencies leading to autoremoval: #1096486

Piuparts failed:

Version: 6.1.20170106+dfsg2-6
Sections: oldstable22testing oldstable222sid

presto

😟 Autoremoval

😟 Install/upgrade

Package marked for automatic removal:

Will be removed on: 2025-10-05
Dependencies leading to autoremoval: csh emboss mafft
Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

Piuparts failed:

Version: 0.7.5-1
Sections: sid-broken-symlinks

srst2

😟 Autoremoval

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Package marked for automatic removal:

Will be removed on: 2025-10-05
Dependencies leading to autoremoval: csh emboss mafft
Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

Piuparts failed:

Version: 0.2.0-13
Sections: sid-broken-symlinks

xpore

😟 Autoremoval

😟 Install/upgrade

Package marked for automatic removal:

Will be removed on: 2025-10-05
Dependencies leading to autoremoval: csh emboss mafft
Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

Piuparts failed:

Version: 2.1-2
Sections: sid-strict sid-nodoc sid-broken-symlinks

adun.app

😟 Autoremoval

😑 Tests missing

Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: gnustep-base
Bugs in dependencies leading to autoremoval: #1096744

Continuous integration (CI) tests are missing.

arb

😟 Autoremoval

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Bugs in dependencies leading to autoremoval: #1096486 #1096792 #1097160 #1097174 #1097179 #1097352 #1097627 #1097779

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beast-mcmc

😟 Autoremoval

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brig

😟 Autoremoval

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embassy-domainatrix

😟 Autoremoval

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embassy-domalign

😟 Autoremoval

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embassy-domsearch

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hinge

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massxpert2

😟 Autoremoval

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Bugs in dependencies leading to autoremoval: #1097240 #1097245 #1097290 #1097786 #1107821

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metastudent-data

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minexpert2

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placnet

😟 Autoremoval

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plasmidid

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python-seqcluster

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qcumber

😟 Autoremoval

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Continuous integration (CI) tests are missing.

r-other-ascat

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rasmol

😟 Autoremoval

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Continuous integration (CI) tests are missing.

sift

😟 Autoremoval

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smrtanalysis

😟 Autoremoval

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Continuous integration (CI) tests are missing.

soapaligner

😟 Autoremoval

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sprai

😟 Autoremoval

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staden

😟 Autoremoval

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Continuous integration (CI) tests are missing.

thesias

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tracetuner

😟 Autoremoval

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Continuous integration (CI) tests are missing.

abyss

😟 Autoremoval

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Bugs in dependencies leading to autoremoval: #1097267

aegean

😟 Autoremoval

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Will be removed on: 2025-09-20
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altree

😟 Autoremoval

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Bugs leading to autoremoval: #1096300

ampliconnoise

😟 Autoremoval

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Bugs in dependencies leading to autoremoval: #1097352

ariba

😟 Autoremoval

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beads

😟 Autoremoval

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bifrost

😟 Autoremoval

Package marked for automatic removal:

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blasr

😟 Autoremoval

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Bugs in dependencies leading to autoremoval: #1097555

btllib

😟 Autoremoval

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busco

😟 Autoremoval

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Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

cct

😟 Autoremoval

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changeo

😟 Autoremoval

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coils

😟 Autoremoval

Package marked for automatic removal:

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Bugs leading to autoremoval: #1096450
Will result in removal of bioperl-run libbio-tools-phylo-paml-perl libbio-tools-run-alignment-clustalw-perl libbio-tools-run-alignment-tcoffee-perl psortb with total popcon score of 0

density-fitness

😟 Autoremoval

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dwgsim

😟 Autoremoval

Package marked for automatic removal:

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Bugs leading to autoremoval: #1096554

emboss

😟 Autoremoval

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Will result in removal of ariba artemis augur bioperl-run busco cctbx changeo chemicaltagger cnvkit cutesv dials elpa-snakemake embassy-domainatrix embassy-domalign embassy-domsearch emboss-explorer gasic graphlan gubbins hinge idseq-bench insilicoseq kallisto kaptive kineticstools kleborate libbio-tools-phylo-paml-perl libbio-tools-run-alignment-clustalw-perl libbio-tools-run-alignment-tcoffee-perl libobjcryst mcaller mdanalysis metaphlan mirtop nanofilt nanolyse ncbi-acc-download objcryst-fox optimir oscar4 parsnp peptidebuilder pigx-rnaseq pizzly presto psortb pyensembl pyfastx pyobjcryst python-bcbio-gff python-biopython python-cai python-cgecore python-cooler python-datacache python-dynasor python-emmet-core python-gffutils python-mp-api python-nanoget python-pauvre python-pbcommand python-pbcore python-prodigy python-pyani python-pyfaidx python-seqcluster python-treetime qcat qcumber recan resfinder seqmagick seqsero smrtanalysis snakemake srst2 trinityrnaseq virulencefinder xpore xraylarch yanagiba with total popcon score of 0

fastlink

😟 Autoremoval

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fsm-lite

😟 Autoremoval

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Dependencies leading to autoremoval: libsdsl
Bugs in dependencies leading to autoremoval: #1097267

graphlan

😟 Autoremoval

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Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

grinder

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-10-06
Dependencies leading to autoremoval: libace-perl libconvert-binary-c-perl libdbd-pg-perl
Bugs in dependencies leading to autoremoval: #1097160 #1097174 #1097179

gubbins

😟 Autoremoval

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idseq-bench

😟 Autoremoval

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insilicoseq

😟 Autoremoval

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Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

iqtree

😟 Autoremoval

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Will result in removal of gubbins with total popcon score of 0

kaptive

😟 Autoremoval

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kineticstools

😟 Autoremoval

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kraken2

😟 Autoremoval

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Dependencies leading to autoremoval: csh
Bugs in dependencies leading to autoremoval: #1096486

lastz

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-09-19
Bugs leading to autoremoval: #1097151

lefse

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-09-28
Dependencies leading to autoremoval: rpy2
Bugs in dependencies leading to autoremoval: #1111088

macsyfinder

😟 Autoremoval

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Dependencies leading to autoremoval: csh
Bugs in dependencies leading to autoremoval: #1096486

metastudent

😟 Autoremoval

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Will be removed on: 2025-10-05
Dependencies leading to autoremoval: csh libace-perl libconvert-binary-c-perl libdbd-pg-perl
Bugs in dependencies leading to autoremoval: #1096486 #1097160 #1097174 #1097179

microbiomeutil

😟 Autoremoval

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Dependencies leading to autoremoval: csh
Bugs in dependencies leading to autoremoval: #1096486

mirtop

😟 Autoremoval

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Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

mrbayes

😟 Autoremoval

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Dependencies leading to autoremoval: pocl
Bugs in dependencies leading to autoremoval: #1097627

murasaki

😟 Autoremoval

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Will be removed on: 2025-10-06
Dependencies leading to autoremoval: libace-perl libconvert-binary-c-perl libdbd-pg-perl
Bugs in dependencies leading to autoremoval: #1097160 #1097174 #1097179

nanofilt

😟 Autoremoval

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nanolyse

😟 Autoremoval

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ncbi-acc-download

😟 Autoremoval

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Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

ncbi-blast+

😟 Autoremoval

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Dependencies leading to autoremoval: csh
Bugs in dependencies leading to autoremoval: #1096486

ncbi-igblast

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-09-19
Bugs leading to autoremoval: #1097435

ncbi-seg

😟 Autoremoval

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Will be removed on: 2025-09-19
Bugs leading to autoremoval: #1097436

njplot

😟 Autoremoval

Package marked for automatic removal:

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Dependencies leading to autoremoval: csh
Bugs in dependencies leading to autoremoval: #1096486

paleomix

😟 Autoremoval

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Bugs in dependencies leading to autoremoval: #1097352

parsnp

😟 Autoremoval

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Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352 #1097922

pbdagcon

😟 Autoremoval

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Dependencies leading to autoremoval: pbcopper
Bugs in dependencies leading to autoremoval: #1097555

phast

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-09-19
Bugs leading to autoremoval: #1097575

pizzly

😟 Autoremoval

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Dependencies leading to autoremoval: csh emboss mafft rpy2 tclx8.4
Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352 #1097972 #1111088

plast

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-09-19
Bugs leading to autoremoval: #1097619

prime-phylo

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-09-19
Bugs leading to autoremoval: #1097647

primer3

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-10-04
Bugs leading to autoremoval: #1097649
Will result in removal of bioperl-run libbio-primerdesigner-perl libbio-tools-phylo-paml-perl libbio-tools-run-alignment-clustalw-perl libbio-tools-run-alignment-tcoffee-perl psortb with total popcon score of 0

proteinortho

😟 Autoremoval

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Bugs in dependencies leading to autoremoval: #1096486

psortb

😟 Autoremoval

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Will be removed on: 2025-10-04
Dependencies leading to autoremoval: coils csh emboss libace-perl libconvert-binary-c-perl libdbd-pg-perl libyaml-syck-perl mafft primer3 sim4
Bugs in dependencies leading to autoremoval: #1096450 #1096486 #1096578 #1097160 #1097174 #1097179 #1097292 #1097352 #1097649 #1097885

pyensembl

😟 Autoremoval

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Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

pyfastx

😟 Autoremoval

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Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

python-gffutils

😟 Autoremoval

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Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

python-nanoget

😟 Autoremoval

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python-pyfaidx

😟 Autoremoval

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Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

python-treetime

😟 Autoremoval

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qcat

😟 Autoremoval

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Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

r-bioc-biostrings

😟 Autoremoval

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Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

r-bioc-cner

😟 Autoremoval

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Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

r-bioc-deseq2

😟 Autoremoval

Package marked for automatic removal:

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Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

r-bioc-genefilter

😟 Autoremoval

Package marked for automatic removal:

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Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

r-bioc-genomicalignments

😟 Autoremoval

Package marked for automatic removal:

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Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

r-bioc-genomicranges

😟 Autoremoval

Package marked for automatic removal:

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Bugs in dependencies leading to autoremoval: #1111759

r-bioc-grohmm

😟 Autoremoval

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Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

r-bioc-isoformswitchanalyzer

😟 Autoremoval

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Bugs in dependencies leading to autoremoval: #1111759

r-bioc-rtracklayer

😟 Autoremoval

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Bugs in dependencies leading to autoremoval: #1111759

r-bioc-tfbstools

😟 Autoremoval

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r-cran-alakazam

😟 Autoremoval

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Bugs in dependencies leading to autoremoval: #1111759

r-cran-spp

😟 Autoremoval

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r-cran-wgcna

😟 Autoremoval

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Dependencies leading to autoremoval: r-bioc-genomeinfodb
Bugs in dependencies leading to autoremoval: #1111759

racon

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-10-04
Bugs leading to autoremoval: #1097767
Dependencies leading to autoremoval: spoa
Bugs in dependencies leading to autoremoval: #1097922
Will result in removal of pinfish unicycler with total popcon score of 0

raster3d

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-09-19
Bugs leading to autoremoval: #1097773

readseq

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-10-04
Bugs leading to autoremoval: #1097779
Dependencies leading to autoremoval: csh
Bugs in dependencies leading to autoremoval: #1096486
Will result in removal of arb with total popcon score of 0

reapr

😟 Autoremoval

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Dependencies leading to autoremoval: bambamc
Bugs in dependencies leading to autoremoval: #1096356

recan

😟 Autoremoval

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Dependencies leading to autoremoval: csh emboss mafft
Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

roguenarok

😟 Autoremoval

Package marked for automatic removal:

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Bugs leading to autoremoval: #1097803

salmon

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-10-04
Bugs leading to autoremoval: #1097838
Dependencies leading to autoremoval: rapmap
Bugs in dependencies leading to autoremoval: #1097770
Will result in removal of pigx-rnaseq with total popcon score of 0

scoary

😟 Autoremoval

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Dependencies leading to autoremoval: rpy2
Bugs in dependencies leading to autoremoval: #1111088

seqmagick

😟 Autoremoval

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Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

seqsero

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-10-05
Dependencies leading to autoremoval: csh emboss mafft
Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

sim4

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-10-04
Bugs leading to autoremoval: #1097885
Will result in removal of bioperl-run libbio-tools-phylo-paml-perl libbio-tools-run-alignment-clustalw-perl libbio-tools-run-alignment-tcoffee-perl psortb with total popcon score of 0

smalt

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: bambamc
Bugs in dependencies leading to autoremoval: #1096356

soapdenovo

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-09-19
Bugs leading to autoremoval: #1097907

soapdenovo2

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-09-19
Bugs leading to autoremoval: #1097909

spades

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-10-04
Bugs leading to autoremoval: #1097913
Will result in removal of ariba shovill unicycler with total popcon score of 0

spoa

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-10-04
Bugs leading to autoremoval: #1097922
Will result in removal of parsnp pinfish python-pyspoa racon shasta svim unicycler with total popcon score of 0

svim

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: spoa
Bugs in dependencies leading to autoremoval: #1097922

sweed

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-09-19
Bugs leading to autoremoval: #1097956

tnseq-transit

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-09-28
Bugs leading to autoremoval: #1098008
Dependencies leading to autoremoval: rpy2
Bugs in dependencies leading to autoremoval: #1111088

velvetoptimiser

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-10-06
Dependencies leading to autoremoval: libace-perl libconvert-binary-c-perl libdbd-pg-perl
Bugs in dependencies leading to autoremoval: #1097160 #1097174 #1097179

yanagiba

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-10-05
Dependencies leading to autoremoval: csh emboss mafft
Bugs in dependencies leading to autoremoval: #1096486 #1096578 #1097352

genomicsdb

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
Reason: depends
Invalidated by another package
Blocked by: openmpi

Piuparts failed:

Version: 1.5.5-1
Sections: oldstable222sid

gromacs

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
Reason: depends
Invalidated by another package
Blocked by: openmpi
Migrates after: hwloc

Piuparts failed:

Version: 2025.3-1
Sections: oldstable222sid

intake

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: entrypoints

Piuparts failed:

Version: 0.6.6-4
Sections: sid-broken-symlinks

pbsuite

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

Piuparts failed:

Version: 15.8.24+dfsg-8
Sections: sid-strict sid-nodoc

python-anndata

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: python-awkward

Piuparts failed:

Version: 0.12.0~rc1-1
Sections: sid-strict sid-nodoc sid-broken-symlinks

python-cogent

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest, autopkgtest-pkg-python

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest, depends

Piuparts failed:

Version: 2024.5.7a1+dfsg-3
Sections: sid-nodoc sid-broken-symlinks sid sid-strict

q2-dada2

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-types, qiime

Piuparts failed:

Version: 2022.11.2-2
Sections: sid-merged-usr

q2cli

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest, depends
Migrates after: qiime

Piuparts failed:

Version: 2024.5.0-2
Sections: sid-strict sid-nodoc sid-broken-symlinks sid

vg

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

Piuparts failed:

Version: 1.30.0+ds-1
Sections: sid-merged-usr

bcbio

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Migrates after: mosdepth, umis

canu

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

circlator

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
Reason: build-depends, depends
Invalidated by another package
Blocked by: canu

hts-nim-tools

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: nim, nim-docopt, nim-hts, nim-kexpr, nim-lapper, nim-regex, nim-unicodedb, nim-unicodeplus

mindthegap

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

mosdepth

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Migrates after: nim, nim-docopt, nim-hts, nim-regex

nanook

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

pychopper

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest, autopkgtest-pkg-python

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

q2-alignment

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-types, qiime

q2-cutadapt

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-types, qiime

q2-demux

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-types, qiime

q2-feature-classifier

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-feature-table, q2-quality-control, q2-taxa, q2-types, qiime

q2-feature-table

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-types, qiime

q2-fragment-insertion

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-types, qiime

q2-phylogeny

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-alignment, q2-types, qiime

q2-quality-control

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-feature-table, q2-taxa, qiime

q2-quality-filter

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-types, qiime

q2-sample-classifier

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-feature-table, q2-types, qiime

q2-types

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: qiime

qiime

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

r-bioc-mofa2

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

readucks

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

relion-cuda

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest, depends

sepp

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
Reason: build-depends, depends
Invalidated by another package
Blocked by: pplacer

umap-learn

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

fastani

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 1.33-3
Sections: sid-broken-symlinks

gatb-core

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 1.4.2+dfsg-13
Sections: oldstable222sid

picard-tools

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 3.3.0+dfsg-2
Sections: oldstable22testing

pirs

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 2.0.2+dfsg-12
Sections: sid-broken-symlinks

stacks

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 2.68+dfsg-2
Sections: sid-broken-symlinks

hdf5

😟 Migration

😟 Install/upgrade

😑 Tests missing

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: openmpi

Piuparts failed:

Version: 1.14.5+repack-3.1
Sections: oldstable222sid

Continuous integration (CI) tests are missing.

nanostat

😟 Migration

😟 Install/upgrade

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

Piuparts failed:

Version: 1.4.0-4
Sections: oldstable222sid

barrnap

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

berkeley-express

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

bio-eagle

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

bitseq

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

bowtie

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

bowtie2

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

centrifuge

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

chromhmm

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

chromimpute

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

daligner

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

dascrubber

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

dawg

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

dazzdb

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

drop-seq

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

examl

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

fastqc

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

gdpc

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

ggd-utils

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

hmmer

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

hnswlib

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

htseq

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

igor

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

infernal

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

jalview

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

jellyfish

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

lambda-align

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

lighter

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

maqview

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

mash

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

metaeuk

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

microbegps

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

mmseqs2

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

mummer

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

muscle

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

nanosv

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

parsinsert

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

perm

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

pilon

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

pique

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

porechop

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

probabel

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

proda

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

pybel

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

pyranges

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

pyrle

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

python-alignlib

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

q2-emperor

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

q2-taxa

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

r-bioc-metagenomeseq

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-qusage

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-tximport

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-cran-bio3d

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest, autopkgtest-pkg-r

r-cran-phangorn

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest, autopkgtest-pkg-r

r-cran-pscbs

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

r-cran-seurat

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest, autopkgtest-pkg-r

r-other-rajewsky-dropbead

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

rockhopper

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

seqan-needle

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

seqan-raptor

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

seqan2

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

sigma-align

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

simka

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

snpeff

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

snpsift

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

solvate

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

spaln

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

sra-sdk

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

sspace

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

stringtie

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

sumaclust

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

theseus

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

toil

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest, autopkgtest-pkg-pybuild

trnascan-se

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

vsearch

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

yanosim

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

acedb

😟 Migration

😑 Tests missing

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression

Continuous integration (CI) tests are missing.

jmodeltest

😟 Migration

😑 Tests missing

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression

Continuous integration (CI) tests are missing.

rdp-classifier

😟 Migration

😑 Tests missing

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression

Continuous integration (CI) tests are missing.

tipp

😟 Migration

😑 Tests missing

Migration from unstable to testing is blocked:

Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
Reason: build-depends, depends
Invalidated by another package
Blocked by: sepp

Continuous integration (CI) tests are missing.

bcftools

😟 Migration

Migration from unstable to testing is blocked:

Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
Reason: build-depends, depends
Invalidated by another package
Blocked by: htslib

hilive

😟 Migration

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

htslib

😟 Migration

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

pplacer

😟 Migration

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression

samtools

😟 Migration

Migration from unstable to testing is blocked:

Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
Reason: build-depends, depends
Invalidated by another package
Blocked by: htslib

umis

😟 Migration

Migration from unstable to testing is blocked:

Verdict: Rejected/violates migration policy/introduces a regression

biosyntax

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1.0.0b-6
Sections: sid-broken-symlinks

Continuous integration (CI) tests are missing.

debian-science

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1.15
Sections: forky-rcmd sid-broken-symlinks trixie-rcmd

Continuous integration (CI) tests are missing.

avogadro

😟 Install/upgrade

Piuparts failed:

Version: 1.100.0-2
Sections: sid-broken-symlinks

bali-phy

😟 Install/upgrade

Piuparts failed:

Version: 4.0-1
Sections: sid-broken-symlinks

bcalm

😟 Install/upgrade

Piuparts failed:

Version: 2.2.3-5
Sections: oldstable222sid

eigensoft

😟 Install/upgrade

Piuparts failed:

Version: 8.0.0+dfsg-2
Sections: sid-broken-symlinks

hyphy

😟 Install/upgrade

Piuparts failed:

Version: 2.5.69+dfsg-1
Sections: oldstable222sid

kmer

😟 Install/upgrade

Piuparts failed:

Version: 0~20150903+r2013-10
Sections: sid-broken-symlinks oldstable22testing

libvcflib

😟 Install/upgrade

Piuparts failed:

Version: 1.0.12+dfsg-1
Sections: oldstable222sid

pdb2pqr

😟 Install/upgrade

Piuparts failed:

Version: 3.6.1+dfsg-1
Sections: sid-broken-symlinks

picopore

😟 Install/upgrade

Piuparts failed:

Version: 1.2.0-3
Sections: sid-nodoc sid-strict sid-broken-symlinks

plip

😟 Install/upgrade

Piuparts failed:

Version: 2.4.0+dfsg-4
Sections: sid-broken-symlinks

poretools

😟 Install/upgrade

Piuparts failed:

Version: 0.6.0+dfsg-7
Sections: sid-strict sid-nodoc sid-broken-symlinks

pycoqc

😟 Install/upgrade

Piuparts failed:

Version: 2.5.2+dfsg-4
Sections: sid-strict sid-broken-symlinks sid-nodoc

python-loompy

😟 Install/upgrade

Piuparts failed:

Version: 3.0.7+dfsg-4
Sections: sid-broken-symlinks sid-strict sid-nodoc

python-pysam

😟 Install/upgrade

Piuparts failed:

Version: 0.23.0+ds-1
Sections: oldstable222sid

seqtools

😟 Install/upgrade

Piuparts failed:

Version: 4.44.1+dfsg-7.1
Sections: oldstable22testing

tombo

😟 Install/upgrade

Piuparts failed:

Version: 1.5.1-7
Sections: sid-broken-symlinks sid-nodoc sid-strict

treeviewx

😟 Install/upgrade

Piuparts failed:

Version: 0.5.1+git20100823.7e4d0e9-4
Sections: oldstable22testing

wise

😟 Install/upgrade

Piuparts failed:

Version: 2.4.1-27
Sections: sid-broken-symlinks

blimps

😑 Tests missing

Continuous integration (CI) tests are missing.

comet-ms

😑 Tests missing

Continuous integration (CI) tests are missing.

ctffind

😑 Tests missing

Continuous integration (CI) tests are missing.

cufflinks

😑 Tests missing

Continuous integration (CI) tests are missing.

dextractor

😑 Tests missing

Continuous integration (CI) tests are missing.

fastml

😑 Tests missing

Continuous integration (CI) tests are missing.

getdata

😑 Tests missing

Continuous integration (CI) tests are missing.

ipig

😑 Tests missing

Continuous integration (CI) tests are missing.

jmol

😑 Tests missing

Continuous integration (CI) tests are missing.

kmerresistance

😑 Tests missing

Continuous integration (CI) tests are missing.

lamarc

😑 Tests missing

Continuous integration (CI) tests are missing.

libpwiz

😑 Tests missing

Continuous integration (CI) tests are missing.

librg-utils-perl

😑 Tests missing

Continuous integration (CI) tests are missing.

macromoleculebuilder

😑 Tests missing

Continuous integration (CI) tests are missing.

malt

😑 Tests missing

Continuous integration (CI) tests are missing.

mauve-aligner

😑 Tests missing

Continuous integration (CI) tests are missing.

megan-ce

😑 Tests missing

Continuous integration (CI) tests are missing.

melting

😑 Tests missing

Continuous integration (CI) tests are missing.

metastudent-data-2

😑 Tests missing

Continuous integration (CI) tests are missing.

mhap

😑 Tests missing

Continuous integration (CI) tests are missing.

openms

😑 Tests missing

Continuous integration (CI) tests are missing.

perlprimer

😑 Tests missing

Continuous integration (CI) tests are missing.

phyutility

😑 Tests missing

Continuous integration (CI) tests are missing.

piler

😑 Tests missing

Continuous integration (CI) tests are missing.

plasmidseeker

😑 Tests missing

Continuous integration (CI) tests are missing.

proalign

😑 Tests missing

Continuous integration (CI) tests are missing.

pscan-chip

😑 Tests missing

Continuous integration (CI) tests are missing.

rambo-k

😑 Tests missing

Continuous integration (CI) tests are missing.

rdp-alignment

😑 Tests missing

Continuous integration (CI) tests are missing.

resfinder-db

😑 Tests missing

Continuous integration (CI) tests are missing.

rtax

😑 Tests missing

Continuous integration (CI) tests are missing.

runcircos-gui

😑 Tests missing

Continuous integration (CI) tests are missing.

saint

😑 Tests missing

Continuous integration (CI) tests are missing.

savvy

😑 Tests missing

Continuous integration (CI) tests are missing.

seq-gen

😑 Tests missing

Continuous integration (CI) tests are missing.

sga

😑 Tests missing

Continuous integration (CI) tests are missing.

sibsim4

😑 Tests missing

Continuous integration (CI) tests are missing.

sideretro

😑 Tests missing

Continuous integration (CI) tests are missing.

skesa

😑 Tests missing

Continuous integration (CI) tests are missing.

soapsnp

😑 Tests missing

Continuous integration (CI) tests are missing.

spread-phy

😑 Tests missing

Continuous integration (CI) tests are missing.

suitename

😑 Tests missing

Continuous integration (CI) tests are missing.

surankco

😑 Tests missing

Continuous integration (CI) tests are missing.

surpyvor

😑 Tests missing

Continuous integration (CI) tests are missing.

tophat-recondition

😑 Tests missing

Continuous integration (CI) tests are missing.

trace2dbest

😑 Tests missing

Continuous integration (CI) tests are missing.

treeview

😑 Tests missing

Continuous integration (CI) tests are missing.

varscan

😑 Tests missing

Continuous integration (CI) tests are missing.

vienna-rna

😑 Tests missing

Continuous integration (CI) tests are missing.

Biology - Quality Assurance

Summary