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Covid-19 - Quality Assurance

Summary

Autoremovals: 46

Migration issues: 42

CI failures: 74

Install issues: 74

No issues: 70/235

This task exists only for tagging COVID-19 relevant cases

The Debian Med team intends to take part at the COVID-19 Biohackathon (April 5-11, 2020) This task was created only for the purpose to list relevant packages.

drmaa

😟 Autoremoval

😟 CI

😟 Install/upgrade

Package marked for automatic removal:

  • Will be removed on: 2024-08-23
  • Dependencies leading to autoremoval: gridengine
  • Bugs in dependencies leading to autoremoval: #1075042

Continuous integration (CI) tests are failing:

Piuparts failed:

python-pbcore

😟 Autoremoval

😟 CI

😟 Install/upgrade

Package marked for automatic removal:

Continuous integration (CI) tests are failing:

Piuparts failed:

  • Version: 1.2.7+dfsg-2~bpo8+1
  • Sections: jessie2bpo

snakemake

😟 Autoremoval

😟 CI

😟 Install/upgrade

Package marked for automatic removal:

Continuous integration (CI) tests are failing:

Piuparts failed:

  • Version: 3.9.0+dfsg-2~bpo8+1
  • Sections: jessie2bpo

unicycler

😟 Autoremoval

😟 CI

😟 Install/upgrade

Package marked for automatic removal:

Continuous integration (CI) tests are failing:

Piuparts failed:

ncbi-blast+

😟 Autoremoval

😟 Migration

😟 Install/upgrade

Package marked for automatic removal:

Migration from unstable to testing is blocked:

  • Verdict: Maybe temporary, maybe blocked but Britney is missing information
  • Reason: autopkgtest, missingbuild

Piuparts failed:

augur

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Continuous integration (CI) tests are failing:

kallisto

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Continuous integration (CI) tests are failing:

pinfish

😟 Autoremoval

😟 CI

Package marked for automatic removal:

  • Will be removed on: 2024-08-23
  • Dependencies leading to autoremoval: libcereal spoa
  • Bugs in dependencies leading to autoremoval: #1075156 #1075532

Continuous integration (CI) tests are failing:

prokka

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Continuous integration (CI) tests are failing:

python-cgecore

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Continuous integration (CI) tests are failing:

q2-cutadapt

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Continuous integration (CI) tests are failing:

q2-feature-table

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Continuous integration (CI) tests are failing:

q2-quality-filter

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Continuous integration (CI) tests are failing:

seqan3

😟 Autoremoval

😟 CI

Package marked for automatic removal:

  • Will be removed on: 2024-08-23
  • Dependencies leading to autoremoval: libcereal
  • Bugs in dependencies leading to autoremoval: #1075156

Continuous integration (CI) tests are failing:

shovill

😟 Autoremoval

😟 CI

Package marked for automatic removal:

  • Will be removed on: 2024-08-23
  • Dependencies leading to autoremoval: velvet
  • Bugs in dependencies leading to autoremoval: #1075617

Continuous integration (CI) tests are failing:

sumaclust

😟 Autoremoval

😟 CI

Package marked for automatic removal:

  • Will be removed on: 2024-08-08
  • Bugs leading to autoremoval: #1075545
  • Dependencies leading to autoremoval: sumalibs
  • Bugs in dependencies leading to autoremoval: #1075544

Continuous integration (CI) tests are failing:

vienna-rna

😟 Autoremoval

😟 Migration

😑 Tests missing

Package marked for automatic removal:

  • Will be removed on: 2024-08-25
  • Bugs leading to autoremoval: #1074158
  • Will result in removal of python-seqcluster with total popcon score of 0

Migration from unstable to testing is blocked:

  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: gsl

Continuous integration (CI) tests are missing.

python-questplus

😟 Autoremoval

😟 Migration

Package marked for automatic removal:

  • Will be removed on: 2024-08-15
  • Bugs leading to autoremoval: #1074664
  • Will result in removal of psychopy with total popcon score of 0

Migration from unstable to testing is blocked:

  • Verdict: Maybe temporary, maybe blocked but Britney is missing information
  • Reason: autopkgtest, missingbuild

gubbins

😟 Autoremoval

😟 Install/upgrade

Package marked for automatic removal:

Piuparts failed:

nanopolish

😟 Autoremoval

😟 Install/upgrade

Package marked for automatic removal:

  • Will be removed on: 2024-08-23
  • Dependencies leading to autoremoval: libslow5lib
  • Bugs in dependencies leading to autoremoval: #1075205

Piuparts failed:

proteinortho

😟 Autoremoval

😟 Install/upgrade

Package marked for automatic removal:

Piuparts failed:

  • Version: 5.15+dfsg-1~bpo8+1
  • Sections: jessie2bpo

python-biopython

😟 Autoremoval

😟 Install/upgrade

Package marked for automatic removal:

Piuparts failed:

python-pyfaidx

😟 Autoremoval

😟 Install/upgrade

Package marked for automatic removal:

Piuparts failed:

plasmidid

😟 Autoremoval

😑 Tests missing

Package marked for automatic removal:

Continuous integration (CI) tests are missing.

python-seqcluster

😟 Autoremoval

😑 Tests missing

Package marked for automatic removal:

Continuous integration (CI) tests are missing.

thesias

😟 Autoremoval

😑 Tests missing

Package marked for automatic removal:

  • Will be removed on: 2024-08-08
  • Bugs leading to autoremoval: #1075571

Continuous integration (CI) tests are missing.

vienna-rna

😟 Autoremoval

😑 Tests missing

Package marked for automatic removal:

  • Will be removed on: 2024-08-25
  • Bugs leading to autoremoval: #1074158
  • Will result in removal of python-seqcluster with total popcon score of 0

Continuous integration (CI) tests are missing.

busco

😟 Autoremoval

Package marked for automatic removal:

changeo

😟 Autoremoval

Package marked for automatic removal:

kraken2

😟 Autoremoval

Package marked for automatic removal:

nanofilt

😟 Autoremoval

Package marked for automatic removal:

nanolyse

😟 Autoremoval

Package marked for automatic removal:

parasail

😟 Autoremoval

Package marked for automatic removal:

  • Will be removed on: 2024-08-23
  • Bugs leading to autoremoval: #1075361
  • Will result in removal of python-parasail qcat with total popcon score of 0

presto

😟 Autoremoval

Package marked for automatic removal:

python-gffutils

😟 Autoremoval

Package marked for automatic removal:

python-nanoget

😟 Autoremoval

Package marked for automatic removal:

python-pairix

😟 Autoremoval

Package marked for automatic removal:

  • Will be removed on: 2024-08-08
  • Bugs leading to autoremoval: #1075419

python-pauvre

😟 Autoremoval

Package marked for automatic removal:

python-pbcommand

😟 Autoremoval

Package marked for automatic removal:

python-pyani

😟 Autoremoval

Package marked for automatic removal:

python-treetime

😟 Autoremoval

Package marked for automatic removal:

qcat

😟 Autoremoval

Package marked for automatic removal:

recan

😟 Autoremoval

Package marked for automatic removal:

salmon

😟 Autoremoval

Package marked for automatic removal:

seqmagick

😟 Autoremoval

Package marked for automatic removal:

yanagiba

😟 Autoremoval

Package marked for automatic removal:

epigrass

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 980 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: numba, python-altair, python-epimodels

Piuparts failed:

pynn

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 40 days.
  • Verdict: Rejected/violates migration policy/introduces a regression

Piuparts failed:

python-cogent

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 193 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest, missingbuild
  • Migrates after: numba

Piuparts failed:

pytorch

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 194 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest, depends, missingbuild

Piuparts failed:

  • Version: 2.1.2+dfsg-4
  • Sections: sid

r-cran-sf

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 28 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

Piuparts failed:

vg

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 690 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest, depends
  • Migrates after: libvcflib

Piuparts failed:

bcbio

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 141 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends
  • Invalidated by another package
  • Blocked by: r-bioc-titancna
  • Migrates after: biobambam2, freebayes, hts-nim-tools, libvcflib, mosdepth, r-bioc-degreport, r-bioc-htsfilter, r-bioc-purecn, r-bioc-summarizedexperiment, r-other-wasabi

fastani

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: gsl

Piuparts failed:

pplacer

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 562 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: gsl

pychopper

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 141 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

python-anndata

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 160 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: python-array-api-compat

python-cooler

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 67 days.
  • Verdict: Rejected/violates migration policy/introduces a regression

r-bioc-htsfilter

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 32 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: r-bioc-deseq2

r-bioc-mutationalpatterns

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 47 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: r-bioc-biostrings, r-bioc-bsgenome, r-bioc-genomeinfodb, r-bioc-genomicranges, r-bioc-iranges, r-bioc-s4vectors, r-bioc-variantannotation

r-bioc-pwmenrich

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 32 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: r-bioc-biostrings, r-bioc-s4vectors

r-bioc-rgsepd

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 32 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: r-bioc-annotationdbi, r-bioc-biomart, r-bioc-deseq2, r-bioc-go.db, r-bioc-goseq, r-bioc-org.hs.eg.db, r-bioc-summarizedexperiment

r-bioc-tcgabiolinks

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 379 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: r-bioc-biomart, r-bioc-genomicranges, r-bioc-iranges, r-bioc-s4vectors, r-bioc-summarizedexperiment

r-cran-epir

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: r-cran-sf

Piuparts failed:

r-cran-shazam

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 32 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: r-cran-alakazam

r-cran-tigger

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 32 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: r-cran-alakazam

readucks

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 141 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

sepp

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 562 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: pplacer

umap-learn

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 193 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Migrates after: numba, python-pynndescent

spaln

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: gsl

toil

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

pigx-rnaseq

😟 Migration

😟 Install/upgrade

😑 Tests missing

Migration from unstable to testing is blocked:

  • Not in testing for 44 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Migrates after: r-bioc-deseq2, r-bioc-rtracklayer, r-bioc-summarizedexperiment

Piuparts failed:

Continuous integration (CI) tests are missing.

freebayes

😟 Migration

😟 Install/upgrade

Migration from unstable to testing is blocked:

  • Not in testing for 92 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Migrates after: libvcflib

Piuparts failed:

r-cran-sjplot

😟 Migration

😟 Install/upgrade

Migration from unstable to testing is blocked:

  • Not in testing for 28 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: r-cran-performance
  • Migrates after: r-cran-sjstats

Piuparts failed:

bowtie2

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

fastani

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

fastqc

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

  • Version: 0.11.5+dfsg-6~bpo8+1
  • Sections: jessie2bpo

gnumed-client

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

gromacs

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

htseq

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

imagej

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

muscle

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

picard-tools

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

pydicom

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

python-pysam

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

  • Version: 0.9.1.4+ds-1~bpo8+1
  • Sections: jessie2bpo

r-bioc-limma

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

samtools

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

vsearch

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

libmaus2

😟 Migration

😑 Tests missing

Migration from unstable to testing is blocked:

  • Not in testing for 11 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest, missingbuild

Continuous integration (CI) tests are missing.

r-other-ascat

😟 Migration

😑 Tests missing

Migration from unstable to testing is blocked:

  • Not in testing for 32 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: r-bioc-iranges
  • Migrates after: r-bioc-genomicranges

Continuous integration (CI) tests are missing.

smrtanalysis

😟 Migration

😑 Tests missing

Migration from unstable to testing is blocked:

  • Not in testing for 141 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: blasr

Continuous integration (CI) tests are missing.

tipp

😟 Migration

😑 Tests missing

Migration from unstable to testing is blocked:

  • Not in testing for 562 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: sepp

Continuous integration (CI) tests are missing.

biobambam2

😟 Migration

Migration from unstable to testing is blocked:

  • Not in testing for 11 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: libmaus2

gffread

😟 Migration

Migration from unstable to testing is blocked:

  • Has been trying to migrate for 36 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

r-bioc-rcpi

😟 Migration

Migration from unstable to testing is blocked:

  • Not in testing for 32 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: r-bioc-gosemsim
  • Migrates after: r-bioc-biostrings

r-bioc-rsamtools

😟 Migration

Migration from unstable to testing is blocked:

  • Not in testing for 32 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Migrates after: r-bioc-biostrings, r-bioc-genomeinfodb, r-bioc-genomicranges, r-bioc-iranges, r-bioc-s4vectors, r-bioc-xvector

r-cran-alakazam

😟 Migration

Migration from unstable to testing is blocked:

  • Not in testing for 32 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: r-bioc-genomicalignments
  • Migrates after: r-bioc-biostrings, r-bioc-iranges

r-cran-kernelheaping

😟 Migration

Migration from unstable to testing is blocked:

  • Not in testing for 25 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: r-cran-sparr

r-cran-spp

😟 Migration

Migration from unstable to testing is blocked:

  • Not in testing for 32 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: r-bioc-rsamtools

centrifuge

😟 CI

Continuous integration (CI) tests are failing:

drop-seq

😟 CI

Continuous integration (CI) tests are failing:

fasta3

😟 CI

Continuous integration (CI) tests are failing:

ivar

😟 CI

Continuous integration (CI) tests are failing:

lighter

😟 CI

Continuous integration (CI) tests are failing:

mmseqs2

😟 CI

Continuous integration (CI) tests are failing:

nanosv

😟 CI

Continuous integration (CI) tests are failing:

odil

😟 CI

Continuous integration (CI) tests are failing:

orthanc-python

😟 CI

Continuous integration (CI) tests are failing:

plip

😟 CI

Continuous integration (CI) tests are failing:

porechop

😟 CI

Continuous integration (CI) tests are failing:

python-depinfo

😟 CI

Continuous integration (CI) tests are failing:

python-pybedtools

😟 CI

Continuous integration (CI) tests are failing:

r-cran-surveillance

😟 CI

Continuous integration (CI) tests are failing:

snpeff

😟 CI

Continuous integration (CI) tests are failing:

snpsift

😟 CI

Continuous integration (CI) tests are failing:

spaln

😟 CI

Continuous integration (CI) tests are failing:

stringtie

😟 CI

Continuous integration (CI) tests are failing:

wtdbg2

😟 CI

Continuous integration (CI) tests are failing:

yanosim

😟 CI

Continuous integration (CI) tests are failing:

gnumed-server

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libchipcard

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libics

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

texlive-extra

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

workrave

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

abacas

😟 Install/upgrade

Piuparts failed:

abyss

😟 Install/upgrade

Piuparts failed:

bcftools

😟 Install/upgrade

Piuparts failed:

bedtools

😟 Install/upgrade

Piuparts failed:

bwa

😟 Install/upgrade

Piuparts failed:

cwltool

😟 Install/upgrade

Piuparts failed:

  • Version: 1.0.20170114120503-1~bpo8+1
  • Sections: jessie2bpo

dcmtk

😟 Install/upgrade

Piuparts failed:

diamond-aligner

😟 Install/upgrade

Piuparts failed:

discosnp

😟 Install/upgrade

Piuparts failed:

gdcm

😟 Install/upgrade

Piuparts failed:

genometools

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kalign

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minia

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minimap2

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nanook

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orthanc

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orthanc-wsi

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poretools

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python-cutadapt

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python-pyvcf

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python-tornado

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r-cran-diagnosismed

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r-cran-epi

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r-cran-epibasix

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r-cran-epicalc

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r-cran-epitools

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r-cran-hms

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r-cran-stringi

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rna-star

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ruby-bio

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spades

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  • Version: 3.9.0+dfsg-1~bpo8+1
  • Sections: jessie2bpo

staden-io-lib

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tnseq-transit

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umis

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dextractor

😑 Tests missing

Continuous integration (CI) tests are missing.

htscodecs

😑 Tests missing

Continuous integration (CI) tests are missing.

macromoleculebuilder

😑 Tests missing

Continuous integration (CI) tests are missing.

milib

😑 Tests missing

Continuous integration (CI) tests are missing.

node-shiny-server

😑 Tests missing

Continuous integration (CI) tests are missing.

tophat-recondition

😑 Tests missing

Continuous integration (CI) tests are missing.

varscan

😑 Tests missing

Continuous integration (CI) tests are missing.