Debian Science Project
Summary
High Energy Physics
Debian Science High Energy Physics packages

This metapackage will install Debian Science packages related to High Energy Physics, which is a branch of physics that studies the elementary subatomic constituents of matter and radiation, and their interactions. The field is also called Particle Physics.

You might also be interested in the debtag field::physics and, depending on your focus, in the physics and education-physics metapackages.

Description

For a better overview of the project's availability as a Debian package, each head row has a color code according to this scheme:

If you discover a project which looks like a good candidate for Debian Science to you, or if you have prepared an unofficial Debian package, please do not hesitate to send a description of that project to the Debian Science mailing list

Links to other tasks

Debian Science High Energy Physics packages

Official Debian packages with high relevance

cernlib
Zestaw analizy danych CERNLIB - metapakiet ogólnego użytku
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CERNLIB to zestaw narzędzi i bibliotek do analizy danych stworzony na potrzeby fizyki doświadczalnej. Można go stosować również w innych dziedzinach naukowych, np. w naukach biologicznych.

Metapakiet dostarcza niemal wszystkich programów i bibliotek zawartych w bibliotece CERN-u (CERNLIB). Większości osób wystarczy prawdopodobnie jedynie ich niewielka część. Dodatkowe programy CERNLIB, przeznaczone dla zainteresowanych, można pobrać instalując metapakiet cernlib-extras.

cernlib-base
Zestaw analizy danych CERNLIB - pliki współdzielone
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CERNLIB to zestaw narzędzi i bibliotek do analizy danych, stworzony na potrzeby fizyki doświadczalnej. Można go stosować również w innych dziedzinach naukowych, np. w naukach biologicznych.

Pakiet zawiera wiele niezależnych od architektury plików wykorzystywanych przez biblioteki i programy CERNLIB, wliczając w to przykładowy skrypt do generowania drzewa katalogów CERNLIB oraz makra do podświetlania składni w Vim-ie dla plików KUIPC CDF i plików makr PAW kumac.

cernlib-core
Zestaw do analizy danych CERNLIB - główne biblioteki i programy
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CERNLIB to zestaw narzędzi do analizy danych oraz bibliotek stworzonych na potrzeby fizyki doświadczalnej, zawiera jednak również aplikacje pomocne w innych dziedzinach, takich jak nauki biologiczne.

Metapakiet dostarcza biblioteki i narzędzia do analizy (np. PAW), które prawdopodobnie będą potrzebne większości użytkowników bibliotek CERN, którzy nie są zainteresowani fizyką wielkich energii. Z metapakietem nie są dostarczone biblioteki deweloperskie czy narzędzia. Można je otrzymać po zainstalowaniu metapakietu cernlib-core-dev albo pojedynczych pakietów lib*-dev.

cernlib-extras
Zestaw do analizy danych CERNLIB - programy dodatkowe
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CERNLIB to zestaw narzędzi do analizy danych oraz bibliotek stworzonych na potrzeby fizyki doświadczalnej, zawiera jednak również aplikacje pomocne w innych dziedzinach, takich jak nauki biologiczne.

Metapakiet dostarcza kilka dodatkowych programów CERNLIB niebędących częścią żadnego innego pakietu CERNLIB. Będą one potrzebne tylko niektórym osobom. Obecnie obejmują one: zftp, pawserv oraz zserv. Ostatnie dwa uruchamiają demona poprzez inetd i mogą zwiększyć zagrożenie dla bezpieczeństwa systemu.

Instalowanie tego pakietu razem z metapakietem cernlib dostarczy całkowity zestaw wszystkich programów i bibliotek CERNLIB. Wyjątkiem są tutaj te, które nie zostały włączone do Debiana z powodów związanych z licencją.

cernlib-montecarlo
Biblioteki Monte Carlo dla CERNLIB
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CERNLIB to zestaw narzędzi do analizy danych oraz bibliotek stworzonych na potrzeby fizyki doświadczalnej, zawiera jednak również aplikacje pomocne w innych dziedzinach, takich jak nauki biologiczne.

Metapakiet zawiera różne biblioteki Monte Carlo włączone do CERNLIB (zarówno współdzielone, jak i statyczne). Prawdopodobnie tylko fizycy będą zainteresowani tymi pakietami. Należy zauważyć, że szkielet GEANT 3.21 nie jest dołączony, ale można go otrzymać poprzez instalację pakietu Debiana geant321.

Powinno się być świadomym tego, że biblioteki Ariadne, Fritiof, Jetset, Lepto oraz Pythia nie są dostępne w Debianie z powodów związanych z licencją. W celu uzyskania informacji jak je zdobyć, zobacz plik README.Debian w pakiecie montecarlo-base.

dials
Diffraction Integration for Advanced Light Sources
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The DIALS software is developed in a fully open-source, collaborative environment. The main development teams are based at Diamond Light Source and CCP4, in the UK, and at Lawrence Berkeley National Laboratory, USA. However, in the spirit of the open source movement, we welcome collaboration from anyone who wishes to contribute to the project.

To avoid “reinventing the wheel” as much as possible, the DIALS project builds on knowledge accumulated over many decades in the field of crystallographic data processing. We benefit greatly from the altruism of experts who contribute their ideas and advice, either directly or via their detailed publications on existing algorithms and packages such as XDS [2] and MOSFLM [3]. At the heart of the DIALS framework lies a design philosophy of hardware abstraction and a generalised model of the experiment that is inspired directly by material published on the seminal workshops on position sensitive detector software [1]. Continuing in the spirit of these workshops we held our own series of meetings, with talks from invited speakers, and code camps in which specific problems are addressed by intensive effort across the collaboration. Summaries of these meetings and copies of slides given as presentations are available here.

DIALS is written using Python and C++, making heavy use of the cctbx [4] for core crystallographic calculations and much infrastructure including a complete build system. Seamless interaction between the C++ and Python components of this hybrid system is enabled by Boost.Python. Python provides a useful ground for rapid prototyping, after which core algorithms and data structures may be transferred over to C++ for speed. High level interfaces of the hybrid system remain in Python, facilitating further development and code reuse both within DIALS and by third parties.

dzedit
Zestaw do analizy danych CERNLIB - edytor dokumentacji ZEBRA
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CERNLIB to zestaw narzędzi do analizy danych oraz bibliotek stworzonych na potrzeby fizyki doświadczalnej, zawiera jednak również aplikacje pomocne w innych dziedzinach, takich jak nauki biologiczne.

DZedit jest interaktywnym interfejsem dla systemu DZDOC (ZEBRA documentation) opracowanego w CERN. ZEBRA będąca częścią biblioteki Packlib pozwala na tworzenie złożonych struktur w języku FORTRAN 77. System DZDOC pomaga generować i utrzymywać dokumentację struktur danych ZEBRA.

feynmf
Zestaw makr LaTeX-a do tworzenia diagramów Feynmana
Maintainer: Thorsten Alteholz
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FeynMF to pakiet LaTeX-a umożliwiający łatwe rysowanie diagramów Feynmana * profesjonalnej jakości. Diagramy Feynmana są ilustracjami, które wyraźnie pokazują podstawowe interakcje cząstek subatomowych. Diagramy można tworzyć za pomocą programów Metafont lub MetaPost. FeynMF w zadowalający sposób porządkuje większość diagramów w oparciu o ich strukturę, bez konieczności ręcznej interwencji. Niemniej jednak w nietypowych przypadkach dostępne są wszystkie opcje Metafont lub MetaPost.

Uwaga! Aby korzystać z wersji FeynMF opartej na MetaPost należy zainstalować pakiet texlive-metapost.

geant321
[Fizyka] Opis i narzędzie symulacji detektora cząstek
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GEANT jest konstrukcją symulującą przechodzenie subatomowych cząstek przez materię, np. detektory cząstek. W celu maksymalnej elastyczności, symulacje GEANT są przygotowywane przez połączenie kodu FORTRAN, napisanego przez użytkownika z biblioteką GEANT, a następnie uruchamiającą uzyskany plik wykonawczy.

Pakiet ten zawiera gxint, skrypt sprawiający, że etap połączenia jest mniej kłopotliwy.

herwig++
??? missing short description for package herwig++ :-(
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kuipc
Zestaw do analizy danych CERNLIB - kompilator KUIP
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CERNLIB to zestaw narzędzi do analizy danych oraz biblioteka stworzona na potrzeby fizyki doświadczalnej, zawiera jednak również aplikacje pomocne w innych dziedzinach, takich jak nauki biologiczne.

KUIPC czyli zestaw do interfejsu użytkownika kompilatora pakietów (Kit for a User Interface Package Compiler) jest narzędziem upraszczającym pisanie kodu interfejsu użytkownika programu. Jako wejścia używa plików CDF (Command Definition File), który opisuje polecenia tak aby zostały zrozumiane przez program i przesyła dane wyjściowe w postaci kodu C lub FORTRAN co powoduje, że odpowiednie wywołania funkcji ustawiają interfejs użytkownika. Następnie kod ten może zostać skompilowany i skonsolidowany z resztą programu. Z powodu używania procedur KUIP przez wygenerowany kod, program musi być także skonsolidowany z biblioteką, która je zawiera.

KUIPC nie jest już aktywnie rozwijany, więc poza tym, że jest używany podczas procesu budowania CERNLIB, jego znaczenie ma głównie wartość historyczną.

kxterm
Zestaw analizy danych CERNLIB - emulator terminala KUIP
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CERNLIB to zestaw narzędzi i bibliotek do analizy danych stworzony na potrzeby fizyki doświadczalnej. Można go stosować również w innych dziedzinach naukowych, np. w naukach biologicznych.

KXterm jest emulatorem terminala, który łączy w sobie najlepsze cechy (już nieużywanych) okienek edycyjnych (padów) systemu graficznego Apollo Desktop Environment (obsługując okienka wejścia i transkrypcji, automatyczne tworzenie kopii zapasowych okienka transkrypcji, wyszukiwanie napisów w oknach edycyjnych, i inne funkcje). Ma on także wiele cech poleceń powłoki Kern, podobnych w stylu do poleceń edytora Emacs, w zakresie edycji i mechanizmu powtarzania wiersza poleceń. Może być wykorzystywany jako interfejs znakowy (interfejs wiersza poleceń) aplikacji CERNLIB.

libroot-bindings-python5.34
??? missing short description for package libroot-bindings-python5.34 :-(
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libroot-bindings-ruby5.34
??? missing short description for package libroot-bindings-ruby5.34 :-(
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libroot-core5.34
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libroot-geom5.34
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libroot-graf2d-gpad5.34
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libroot-graf2d-graf5.34
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libroot-graf2d-postscript5.34
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libroot-graf3d-eve5.34
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libroot-graf3d-g3d5.34
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libroot-graf3d-gl5.34
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libroot-gui-ged5.34
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libroot-gui5.34
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libroot-hist-spectrum5.34
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libroot-hist5.34
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libroot-html5.34
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libroot-io-xmlparser5.34
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libroot-io5.34
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libroot-math-foam5.34
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libroot-math-genvector5.34
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libroot-math-mathcore5.34
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libroot-math-mathmore5.34
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libroot-math-matrix5.34
??? missing short description for package libroot-math-matrix5.34 :-(
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libroot-math-minuit5.34
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libroot-math-mlp5.34
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libroot-math-physics5.34
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libroot-math-quadp5.34
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libroot-math-smatrix5.34
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libroot-math-splot5.34
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libroot-math-unuran5.34
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libroot-misc-memstat5.34
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libroot-misc-minicern5.34
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libroot-misc-table5.34
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libroot-montecarlo-eg5.34
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libroot-net-auth5.34
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libroot-net-bonjour5.34
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libroot-proof-proofplayer5.34
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libroot-proof5.34
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libroot-tree-treeplayer5.34
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looptools
Integral Evaluator of One-loop Feynman Diagram
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LoopTools is a package for evaluation of scalar and tensor one-loop integrals based on the FF package by G.J. van Oldenborgh. It features an easy Fortran, C++, and Mathematica interface to the scalar one-loop functions of FF and in addition provides the 2-, 3-, and 4-point tensor coefficient functions.

This package provides program file, lt, of LoopTools.

neuron
Simulation environment for computational models of neurons
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NEURON is a simulation environment for modeling individual neurons and networks of neurons. It provides tools for conveniently building, managing, and using models in a way that is numerically sound and computationally efficient. It is particularly well-suited to problems that are closely linked to experimental data, especially those that involve cells with complex anatomical and biophysical properties.

NEURON offers

  • "natural syntax", which allows one to specify model properties in familiar idioms
  • efficient and painless spatial and temporal discretization
  • several different, user-selectable numerical integration methods
  • convenient user interface (interpreters + GUI)
  • user-extendable library of biophysical mechanisms
nypatchy
CERNLIB data analysis suite - patch pre-processor for source code
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CERNLIB is a suite of data analysis tools and libraries created for use in physics experiments, but also with applications to other fields such as the biological sciences.

This package contains the Nypatchy family of programs, the successors to Patchy and Ypatchy. These programs are intended for working with sets of patches (for instance, for use on different machine architectures) meant to be applied to a source code tree. The patch sets and common source code are maintained as a single text-based Patchy Master file (PAM file). PAM files can contain C, FORTRAN, or assembly code.

Nypatchy and related utilities can perform actions on a PAM file such as updating it; comparing it to an older version; or outputting source code suitable for input to a compiler, having selected some subset of available patches to use. These utilities can be used interactively, or can run in batch mode from a "cradle" file of commands.

While Nypatchy is still used in places, mainly high-energy physics, these programs are no longer under active development. They are not recommended for use in new projects.

octave-lhapdf
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paw
Physics Analysis Workstation (ang. Stacja robocza do analizy dla fizyków) - program do analizy graficznej
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CERNLIB to zestaw narzędzi do analizy danych oraz biblioteka stworzona na potrzeby fizyki doświadczalnej, zawiera jednak również aplikacje pomocne w innych dziedzinach, takich jak nauki biologiczne.

PAW jest interaktywnym programem zawierającym narzędzia do graficznej prezentacji oraz do analizy statystycznej i matematycznej. Jest przeznaczony do pracy na obiektach bliskich fizykom takich jak histogramy, pliki zdarzeń (Ntuples), wektory itp.

W celu poprawnego funkcjonowania, na architekturach 64-bitowych, program jest łączony statycznie z biblioteką CERN, gdyż nie był projektowany na taką architekturę.

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paw++
Physics Analysis Workstation (Lesstif-enhanced version)
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CERNLIB is a suite of data analysis tools and libraries created for use in physics experiments, but also with applications to other fields such as the biological sciences.

This package includes Paw++, an interactive program for use in analysis and graphical presentation. Paw++ is the same program as PAW (in the "paw" package), but with a more user-friendly Motif-based GUI, compiled against Lesstif in Debian.

The program is linked statically against the CERN libraries on 64-bit architectures in order to function properly, as its design is not very 64-bit clean.

pawserv
CERNLIB data analysis suite - distributed PAW and file transfer servers
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CERNLIB is a suite of data analysis tools and libraries created for use in physics experiments, but also with applications to other fields such as the biological sciences.

This package contains the server daemon for remote PAW clients. PAW is the Physics Analysis Workstation, a graphical analysis program. Included in the same binary is zserv, the server daemon for the ZFTP protocol; zserv is a macro-extensible file transfer program which supports the transfer of formatted, unformatted and ZEBRA RZ files (CMZ, HBOOK, etc.). It is similar to a standard FTP daemon, although it listens on a different port. Both servers operate through inetd.

Since these servers accept passwords in clear text and do not support SSL or other encryption methods, you should probably only install this package within a trusted LAN. It should be seen as equivalent to vanilla telnetd in terms of security (or lack thereof).

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pythia8-root-interface
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rivet
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root-plugin-geom-gdml
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root-plugin-graf2d-asimage
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root-plugin-graf2d-qt
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root-plugin-gui-fitpanel
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root-plugin-gui-guibuilder
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root-plugin-gui-sessionviewer
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root-plugin-hist-hbook
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root-plugin-hist-histpainter
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root-plugin-hist-spectrumpainter
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root-plugin-io-sql
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root-plugin-math-fftw3
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root-plugin-math-fumili
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root-plugin-math-minuit2
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root-plugin-montecarlo-pythia8
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root-plugin-net-globus
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root-plugin-net-krb5
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root-plugin-sql-mysql
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root-plugin-sql-odbc
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root-plugin-sql-pgsql
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root-plugin-tree-treeviewer
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root-system
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root-system-bin
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root-system-common
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root-system-proofd
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root-system-rootd
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sdpb
Semidefinite program solver
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SDPB is an open-source, arbitrary-precision, parallelized semidefinite program solver, designed for the conformal bootstrap. SDPB significantly outperforms less specialized solvers and should enable many new computations.

For more information, see "A Semidefinite Program Solver for the Conformal Bootstrap" at http://arxiv.org/abs/1502.02033.

thepeg
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thepeg-gui
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zftp
CERNLIB data analysis suite - file transfer program
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CERNLIB is a suite of data analysis tools and libraries created for use in physics experiments, but also with applications to other fields such as the biological sciences.

ZFTP is a macro-extensible file transfer program which supports the transfer of formatted, unformatted and ZEBRA RZ files (CMZ, HBOOK, etc.). It provides a common interface on all systems and avoids the problems of file format conversion that occur when transferring CERNLIB files between different architectures.

Except for the special treatment of CERNLIB files and use of a different port, zftp is very similar to an FTP client. Unless you are already familiar with this program, it will almost certainly be useless to you.

Official Debian packages with lower relevance

geant321-doc
[Fizyka] Dokumentacja dla GEANT 3.21
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GEANT jest konstrukcją symulującą przechodzenie subatomowych cząstek przez materię, np. detektory cząstek. W celu maksymalnej elastyczności, symulacje GEANT są przygotowywane przez połączenie kodu FORTRAN, napisanego przez użytkownika z biblioteką GEANT, a następnie uruchamiającą uzyskany plik wykonawczy.

Pakiet ten zawiera nieco dokumentacji w formacie tekstowym o GEANT 3.2.

lhapdf-pdfsets-minimal
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paw-demos
Physics Analysis Workstation examples and tests
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CERNLIB is a suite of data analysis tools and libraries created for use in physics experiments, but also with applications to other fields such as the biological sciences.

This package includes example scripts for use by PAW or Paw++, and test scripts to make sure that the PAW or Paw++ programs behave correctly. You may run the examples and tests with the included paw-demos program.

root-system-doc
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Packaging has started and developers might try the packaging code in VCS

geant4
physics simulation toolkit
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Version: 11.0.1+ds-1

Geant4 is a toolkit for the simulation of the passage of particles through matter. Its areas of application include high energy, nuclear and accelerator physics, as well as studies in medical and space science.

This is a metapackage depending on all libraries.

*Popularitycontest results: number of people who use this package regularly (number of people who upgraded this package recently) out of 247275