Debian Science Project
Summary
Meteorology-dev
Debian Science Meteorology-dev packages

This metapackage will install Debian Science packages which might be helpful for development of applications for Meteorology and Climate.

You might also be interested in the science-meteorology metapackage.

Description

For a better overview of the project's availability as a Debian package, each head row has a color code according to this scheme:

If you discover a project which looks like a good candidate for Debian Science to you, or if you have prepared an unofficial Debian package, please do not hesitate to send a description of that project to the Debian Science mailing list

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Debian Science Meteorology-dev packages

Official Debian packages with high relevance

Fftw-dev
library for computing Fast Fourier Transforms
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This library computes FFTs in one or more dimensions. It is extremely fast. This package contains the statically linked library and the header files.

Libaec-dev
Development files for the Adaptive Entropy Coding library
Maintainer: Alastair McKinstry
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Libaec provides fast lossless compression of 1 up to 32 bit wide signed or unsigned integers (samples). The library achieves best results for low entropy data as often encountered in space imaging instrument data or numerical model output from weather or climate simulations. While floating point representations are not directly supported, they can also be efficiently coded by grouping exponents and mantissa.

Libblas-dev
Basic Linear Algebra Subroutines 3, static library
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This package is a binary incompatible upgrade to the blas-dev package. Several minor changes to the C interface have been incorporated.

BLAS (Basic Linear Algebra Subroutines) is a set of efficient routines for most of the basic vector and matrix operations. They are widely used as the basis for other high quality linear algebra software, for example lapack and linpack. This implementation is the Fortran 77 reference implementation found at netlib.

This package contains a static version of the library.

Libcdi-dev
Development files for the climate data interface library
Maintainer: Alastair McKinstry
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CDI is a C and Fortran Interface to access Climate model Data. Supported data formats are GRIB, netCDF, SERVICE, EXTRA and IEG. This package provides development libraries to build against CDI.

Libcmor-dev
Development files for Climate Model Output Rewriter
Maintainer: Alastair McKinstry
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The "Climate Model Output Rewriter" (CMOR, pronounced "Seymour") comprises a set of C-based functions, with bindings to both Python and FORTRAN 90, that can be used to produce CF-compliant netCDF files. that fulfill the requirements of many of the climate community's standard model experiments.

This package contains files needed to build and link against the CMOR library.

Libcoarrays-dev
Co-Array Fortran libraries for gfortran - development files
Maintainer: Alastair McKinstry
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OpenCoArrays is an open-source software project that supports the coarray Fortran (CAF) parallel programming features of the Fortran 2008 standard and several features proposed for Fortran 2015 in the draft Technical Specification [TS 18508] "Additional Parallel Features in Fortran".

This package provides the libraries necessary for gfortran to build parallel CAF programs built on top of MPI.

Libdap-dev
Development files (headers and static libraries) for libdap
Maintainer: Alastair McKinstry
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OPeNDAP provides software that allows you to access data over the internet, from programs that weren't originally designed for that purpose, as well as some that were. While OPeNDAP is the original developer of the Data Access protocol which its software uses, many other groups have adopted DAP and provide compatible clients, servers and software development kits.

This package contains header files, pkgconfig files and static libraries for DAP.

Libeccodes-dev
GRIB and BUFR decoding/encoding software library (development)
Maintainer: Alastair McKinstry
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ecCodes is the ECMWF encoding/decoding software for GRIB and BUFR.

ECMWF is the European Centre for Medium-Range Weather Forecasts.

Libeccodes-tools
GRIB decoding/encoding software (utilities)
Maintainer: Alastair McKinstry
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ecCodes is the ECMWF encoding/decoding software for GRIB and BUFR.

This is a useful set of command line tools to give quick access to grib messages.

ECMWF is the European Centre for Medium-Range Weather Forecasts.

Libemos-dev
ECMWF Interpolation Library - development
Maintainer: Alastair McKinstry
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The Interpolation library (EMOSLIB) includes Interpolation software and GRIB, BUFR, CREX encoding/decoding routines. It is used by the ECMWF meteorological archival and retrieval system (MARS) and also by the ECMWF graphics package MetView.

This package contains the static libraries and headers needed to build applications against libemos.

Libfftw3-dev
Library for computing Fast Fourier Transforms - development
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The FFTW library computes Fast Fourier Transforms (FFT) in one or more dimensions. It is extremely fast. This package contains the statically linked library, header files and test programs.

This package contains the header files and static libraries. For documentation, see libfftw3-doc.

Libfftw3-doc
Documentation for fftw version 3
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The FFTW library computes Fast Fourier Transforms (FFT) in one or more dimensions. It is extremely fast. This package contains the documentation for the fftw3 library.

Libgadap-dev
Development and static libraries for GADAP
Maintainer: Alastair McKinstry
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Gadap provides in-situ access to OpeNDAP data for GrADS, the Grid Analysis and Display System. This package provides development headers and static libraries for GADAP.

Libgctp-dev
General Cartographic Transformation Package - development files
Maintainer: Alastair McKinstry
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This package contains the static library, pkg-config files and include files needed to build with the General Cartographic Transformation Package library.

Libgrib2c-dev
NCEP GRIB2 library - development files
Maintainer: Alastair McKinstry
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This is the libgrib2c library from NCEP for encoding and decoding 'GRIB2' data formats.

This package contains the static libraries and headers needed to build applications against libgrib2.

Libhdfeos-dev
Development files for the HDF-EOS4 library
Maintainer: Alastair McKinstry
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HDF-EOS4 is a software library designed built on HDF4 to support EOS-specific data structures, namely Grid, Point, and Swath. The new data structures are constructed from standard HDF data objects, using EOS conventions, through the use of a software library [1,4]. A key feature of HDF-EOS files is that instrument-independent services, such as subsetting by geolocation, can be applied to the files across a wide variety of data products.

This package contains include files and static libraries for HDF-EOS4.

Libhe5-hdfeos-dev
Development files for the HDF-EOS5 library
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HDF-EOS5 is a software library designed built on HDF5 to support EOS-specific data structures, namely Grid, Point, and Swath. The new data structures are constructed from standard HDF data objects, using EOS conventions, through the use of a software library. A key feature of HDF-EOS files is that instrument-independent services, such as subsetting by geolocation, can be applied to the files across a wide variety of data products.

This package contains include files and static libraries for HDF-EOS5.

Liblapack-dev
Library of linear algebra routines 3 - static version
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LAPACK version 3.X is a comprehensive FORTRAN library that does linear algebra operations including matrix inversions, least squared solutions to linear sets of equations, eigenvector analysis, singular value decomposition, etc. It is a very comprehensive and reputable package that has found extensive use in the scientific community.

This package contains a static version of the library.

Liblapack-doc
Library of linear algebra routines 3 - documentation
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LAPACK version 3.X is a comprehensive FORTRAN library that does linear algebra operations including matrix inversions, least squared solutions to linear sets of equations, eigenvector analysis, singular value decomposition, etc. It is a very comprehensive and reputable package that has found extensive use in the scientific community.

This package contains:

  • manpages of BLAS and LAPACK routines,
  • the Lapack User's Guide manual (in HTML),
  • the manual for the LAPACKE C interface to LAPACK (in PDF).
Liblas-dev
ASPRS LiDAR data translation library - C++ development files
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libLAS is a C/C++ library for reading and writing ASPRS LAS versions 1.0, 1.1 and 1.2 data. The LAS format is a sequential binary format used to store data from sensors and as intermediate processing storage by some LiDAR-related applications. LiDAR (Light Detection and Ranging) is an optical remote sensing technology that measures properties of scattered light to find range and/or other information of a distant target. The prevalent method to determine distance to an object or surface is to use laser pulses.

This package contains the development files to build applications in C++.

Libmagics++-dev
Development files for ECMWF plotting software MAGICS++
Maintainer: Alastair McKinstry
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Magics++ is the latest generation of the ECMWF's Meteorological plotting software MAGICS. Although completely redesigned in C++, it is intended to be as backwards-compatible as possible with the Fortran interface. Besides its programming interfaces (Fortran and C), Magics++ offers MagML, a plot description language based on XML aimed at automatic web production.

This package includes the header files and static libraries needed to build against libmagics++.

Libnetcdf-dev
creation, access, and sharing of scientific data
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NetCDF (network Common Data Form) is a set of interfaces for array-oriented data access and a freely distributed collection of data access libraries for C, Fortran, C++, Java, and other languages. The netCDF libraries support a machine-independent format for representing scientific data. Together, the interfaces, libraries, and format support the creation, access, and sharing of scientific data.

This package provides headers.

Liboasis3-dev
Development files for OASIS3 climate model coupler
Maintainer: Alastair McKinstry
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OASIS3-MCT is a library for exchanging via MPI fields between components of climate models, such as atmosphere and ocean models. In addition, OASIS can perform interpolation between different grids used by the components, via the SCRIP library.

This package contains development files for building against OASIS3.

Libopenturns-dev
headers and development libraries for OpenTURNS
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OpenTURNS is a powerful and generic tool to treat and quantify uncertainties in numerical simulations in design, optimization and control. It allows both sensitivity and reliability analysis studies:

  • defining the outputs of interest and decision criterion;
  • quantify and model the source of uncertainties;
  • propagate uncertainties and/or analyse sensitivity and
  • rank the sources of uncertainty

OpenTURNS is a large project with more than 300 C++ classes which uses well known and supported software such as R for the statistical methods and BLAS/LAPACK for the linear algebra.

This package provides the OpenTURNS headers should be used if one wants to link its application against the library.

Libproj-dev
Cartographic projection library (development files)
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Proj and invproj perform respective forward and inverse transformation of cartographic data to or from Cartesian data with a wide range of selectable projection functions (over 100 projections).

Geod and invgeod perform geodesic (Great Circle) computations for determining latitude, longitude and back azimuth of a terminus point given a initial point latitude, longitude, azimuth and distance (direct) or the forward and back azimuths and distance between an initial and terminus point latitudes and longitudes (inverse).

This package provides the PROJ4 development files.

Librsl-dev
Development files for RSL
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RSL is a library produced by the NASA TRMM Satellite Validation Office and used to access several radar file formats. It can generated images directly or be used to load data files for other programs.

It can read the following file formats: WSR88D/NEXRAD, Lassen, Sigmet, McGill, UF, HDF, RAPIC, RADTEC and the native RSL file format.

This package contains the header files and static libraries which are needed for developing programs that use grits.

Libsphere-dev
Development files for Spherepack scientific library
Maintainer: Alastair McKinstry
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SPHEREPACK is a collection of FORTRAN programs that facilitates computer modeling of geophysical processes. The package contains programs for computing certain common differential operators including divergence, vorticity, gradients, and the Laplacian of both scalar and vector functions. Programs are also available for inverting these operators. For example, given divergence and vorticity, the package can be used to compute the velocity components. The Laplacian can also be inverted and therefore the package can be used to solve both the scalar and vector Poisson equations. Its use in model development is demonstrated by a sample program that solves the time-dependent non-linear shallow-water equations. Accurate solutions are obtained via the spectral method that uses both scalar and vector spherical harmonic transforms that are available to the user. The package also contains utility programs for computing the associated Legendre functions, Gauss points and weights, and multiple fast Fourier transforms. Programs are provided for both equally-spaced and Gauss distributed latitudinal points as well as programs that transfer data between these grids.

Libterralib-dev
C++ library for Geographical Information Systems -- development package
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TerraLib enables quick development of custom-built geographical applications using spatial databases. As a research tool, TerraLib is aimed at providing a rich and powerful environment for the development of GIS research, enabling the development of GIS prototypes that include new concepts such as spatio-temporal data models, geographical ontologies and advanced spatial analysis techniques. TerraLib defines a geographical data model and provides support for this model over a range of different DBMS (MySQL, PostgreSQL, ORACLE and ACCESS), and is implemented as a library of C++ classes and functions, written in ANSI-C++.

This package contains development files for terralib.

Libudunits2-dev
Development files for the libunits physical units package
Maintainer: Alastair McKinstry
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The UDUNITS package supports units of physical quantities (e.g., meters, seconds). Specifically, it supports conversion between string and binary representations of units, arithmetic manipulation of units, and conversion of numeric values between compatible units. The package is written in the C programming language.

This package provides the include files and static libraries for development.

Libwreport-dev
library for working with weather reports
Maintainer: Enrico Zini
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libwreport is a C++ library for working with weather reports.

The main feature of libwreport is a powerful decoder and encoder for the BUFR and CREX formats.

It also provides a useful abstraction to handle values found in weather reports, with awareness of significant digits, measurement units, variable descriptions, unit conversion and attributes on variables.

Features provided:

  • Read and write BUFR version 2, 3, and 4
  • Read and write CREX
  • Unit conversion
  • Handling of physical variables
Netcdf-bin
Programs for reading and writing NetCDF files
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Contains the programs ncdump and ncgen which convert NetCDF files to ASCII and back, respectively. NetCDF (network Common Data Form) is an interface for scientific data access and a freely-distributed software library that provides an implementation of the interface. The netCDF library also defines a machine-independent format for representing scientific data. Together, the interface, library, and format support the creation, access, and sharing of scientific data.

Python-openturns
Python front-end of OpenTURNS (aka TUI)
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OpenTURNS is a powerful and generic tool to treat and quantify uncertainties in numerical simulations in design, optimization and control. It allows both sensitivity and reliability analysis studies:

  • defining the outputs of interest and decision criterion;
  • quantify and model the source of uncertainties;
  • propagate uncertainties and/or analyse sensitivity and
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This package provides a textual user interface that gives access to all the functionalities provided by the OpenTURNS library.

R-cran-rnetcdf
GNU R package that provides an R interface to NetCDF datasets
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This package provides an R interface to Unidata's NetCDF library functions. NetCDF (network Common Data Form) is a set of interfaces for array-oriented data access. In addition to the interface to the NetCDF library functions, R interfaces are provided to access Unidata's UDUNITS calendar conversions.

Sfftw-dev
library for computing Fast Fourier Transforms
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This library computes FFTs in one or more dimensions. It is extremely fast. This package contains the statically linked library and the header files.

Wcslib-dev
Header files and static library for wcslib and pgsbox
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WCSLIB is a C library, supplied with a full set of Fortran wrappers, that implements the "World Coordinate System" (WCS) standard in FITS (Flexible Image Transport System).

PGSBOX draws and labels a curvilinear coordinate grid. The caller must provide a separate external function, NLFUNC, to define the non-linear coordinate transformation.

This package contains the static libraries and the C header files.

The package is enhanced by the following packages: libpgsbox-dev
Please cite: M. R. Calabretta, F. Valdes, E. W. Greisen and S. L. Allen: Representations of distortions in FITS world coordinate systems. (eprint) Astronomical Data Analysis Software and Systems (ADASS) XIII 314:551 (2004)
Wcslib-doc
API documentation for wcslib
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WCSLIB is a C library, supplied with a full set of Fortran wrappers, that implements the "World Coordinate System" (WCS) standard in FITS (Flexible Image Transport System).

This package contains the API documentation for WCSLIB.

Please cite: M. R. Calabretta, F. Valdes, E. W. Greisen and S. L. Allen: Representations of distortions in FITS world coordinate systems. (eprint) Astronomical Data Analysis Software and Systems (ADASS) XIII 314:551 (2004)

Official Debian packages with lower relevance

Gfortran
GNU Fortran 95 compiler
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This is the GNU Fortran 95 compiler, which compiles Fortran 95 on platforms supported by the gcc compiler. It uses the gcc backend to generate optimized code.

This is a dependency package providing the default GNU Fortran 95 compiler.

Ksh
Real, AT&T version of the Korn shell
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Ksh is a UNIX command interpreter (shell) that is intended for both interactive and shell script use. Its command language is a superset of the sh(1) shell language.

The 1993 version adds a number of new, mostly scripting related, features over the 1988 version that is typically distributed with commercial UNIX variants. For example, it has lexical scoping, compound variables, associative arrays, named references and floating point math.

The shcomp tool can be used to compile ksh scripts into a binary format.

Libcblas-dev
Basic Linear Algebra Subroutines 3, static library
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This package is a binary incompatible upgrade to the blas-dev package. Several minor changes to the C interface have been incorporated.

BLAS (Basic Linear Algebra Subroutines) is a set of efficient routines for most of the basic vector and matrix operations. They are widely used as the basis for other high quality linear algebra software, for example lapack and linpack. This implementation is the Fortran 77 reference implementation found at netlib.

This implementation of the library belongs to the CLAPACK distribution.

This package contains a static version of the library.

Libfeel++-dev
A library for the finite element method
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Provides the header files and static libraries.

Feel++ is a versatile finite element library to solve partial differential equations.

Support 1D, 2D, 3D

Support the following basic entities: simplices (segment, triangle, tetrahedron) and product of simplices (quadrangle, hexahedron)

Support various point sets on these basic entities: equispaced points, quadrature points, interpolation points (Gauss-Lobatto, Fekete, WarpBlend?)

Support continuous and discontinuous Galerkin methods

Support various polynomial sets:

  • Lagrange(continuous,discontinuous,all dimensions,all interpolation point sets)

  • Dubiner(discontinuous), boundary adapted(continuous)

  • Legendre(discontinuous), boundary adapted(continuous)

Provide mathematical concept for higher order abstraction (Function spaces and associated elements, forms and operators)

Provide a language embedded in C++ for variational formulations, projection and numerical integration

Openturns-examples
examples of OpenTURNS functionalities
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OpenTURNS is a powerful and generic tool to treat and quantify uncertainties in numerical simulations in design, optimization and control. It allows both sensitivity and reliability analysis studies:

  • defining the outputs of interest and decision criterion;
  • quantify and model the source of uncertainties;
  • propagate uncertainties and/or analyse sensitivity and
  • rank the sources of uncertainty

OpenTURNS is a large project with more than 300 C++ classes which uses well known and supported software such as R for the statistical methods and BLAS/LAPACK for the linear algebra.

This package provides examples which are written either in C++ or in Python.

They are primarly used as validation tests for the whole platform but they can also be seen as tutorials for beginners.

Pkg-config
manage compile and link flags for libraries
Maintainer: Tollef Fog Heen
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pkg-config is a system for managing library compile and link flags that works with automake and autoconf.

Increasingly libraries ship with ".pc" files that allow querying of the compiler and linker flags needed to use them through the pkg-config(1) program.

Python-coards
COARDS-compliant time parser (Python 2)
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This module is intended to help parse time values represented using the COARDS convention.

What is COARDS?

The Cooperative Ocean-Atmosphere Research Data Service (COARDS) is joint project between NOAA labs and universities. It is a World-Wide-Web-based system to locate and retrieve important climate data sets and perform "live access" visualizations of selected subsets. Scientists at each of the cooperating sites and elsewhere can use COARDS to quickly gain access to oceanographic and atmospheric data sets. COARDS is a true "virtual data center" where a user can download data from any participating site without being concerned as where it actually resides.

This package provides the library for Python 2.

Python3-coards
COARDS-compliant time parser (Python 3)
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This module is intended to help parse time values represented using the COARDS convention.

What is COARDS?

The Cooperative Ocean-Atmosphere Research Data Service (COARDS) is joint project between NOAA labs and universities. It is a World-Wide-Web-based system to locate and retrieve important climate data sets and perform "live access" visualizations of selected subsets. Scientists at each of the cooperating sites and elsewhere can use COARDS to quickly gain access to oceanographic and atmospheric data sets. COARDS is a true "virtual data center" where a user can download data from any participating site without being concerned as where it actually resides.

This package provides the library for Python 3.

Udunits-bin
Utility for handling units of physical quantities
Maintainer: Alastair McKinstry
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udunits is a utility for handling units of physical quantities. It supports conversion between string and binary representations of units, arithmetic manipulation of units, and conversion of numeric values between compatible units. The package is written in the C programming language.

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