Debian Science Meteorology-dev packages

This is a toolkit from ECMWF extend CMAKE with macros used at ECMWF.

ECMWF is the European Centre for Medium-Range Weather Forecasts.

FCM is a set of tools for managing and building source code. FCM uses Subversion for code management but defines a common process and naming convention to simplify usage. It adds a layer on top of Subversion to provide a more natural and user-friendly interface.

FCM features a powerful build system, mainly aimed at building modern Fortran software applications.

This library computes FFTs in one or more dimensions. It is extremely fast. This package contains the statically linked library and the header files.

Libaec provides fast lossless compression of 1 up to 32 bit wide signed or unsigned integers (samples). The library achieves best results for low entropy data as often encountered in space imaging instrument data or numerical model output from weather or climate simulations. While floating point representations are not directly supported, they can also be efficiently coded by grouping exponents and mantissa.

Atlas is an ECMWF library for parallel data-structures supporting unstructured grids and function spaces, with the aim to investigate alternative more scalable dynamical core options for Earth System models, and to support modern interpolation and product generation software.

Atlas is predominantly C++ code, with main features available to Fortran codes through a F2003 interface. ECMWF is the European Centre for Medium-Range Weather Forecasts.

This package is a binary incompatible upgrade to the blas-dev package. Several minor changes to the C interface have been incorporated.

BLAS (Basic Linear Algebra Subroutines) is a set of efficient routines for most of the basic vector and matrix operations. They are widely used as the basis for other high quality linear algebra software, for example lapack and linpack. This implementation is the Fortran 77 reference implementation found at netlib.

This package contains a static version of the library.

CDI is a C and Fortran Interface to access Climate model Data. Supported data formats are GRIB, netCDF, SERVICE, EXTRA and IEG. This package provides development libraries to build against CDI.

The "Climate Model Output Rewriter" (CMOR, pronounced "Seymour") comprises a set of C-based functions, with bindings to both Python and FORTRAN 90, that can be used to produce CF-compliant netCDF files. that fulfill the requirements of many of the climate community's standard model experiments.

This package contains files needed to build and link against the CMOR library.

OpenCoArrays is an open-source software project that supports the coarray Fortran (CAF) parallel programming features of the Fortran 2008 standard and several features proposed for Fortran 2015 in the draft Technical Specification [TS 18508] "Additional Parallel Features in Fortran".

This package contains shared development files (headers and fortran modules)

The Common Data Access framework allows reading of scientific data from various data formats, including structured ascii, structured binary, XML, netCDF, CDF, HDF4, HDF5, GRIB, RINEX and SP3. It provides a single consistent hierarchical view on data independent of the underlying storage format.

This package contains files needed to develop C and Fortran programs against CODA.

The Common Data Access framework allows reading of scientific data from various data formats, including structured ascii, structured binary, XML, netCDF, CDF, HDF4, HDF5, GRIB, RINEX and SP3. It provides a single consistent hierarchical view on data independent of the underlying storage format.

This package contains Java files needed to use the CODA framework.

ecCodes is the ECMWF encoding/decoding software for GRIB and BUFR.

ECMWF is the European Centre for Medium-Range Weather Forecasts.

ecCodes is the ECMWF encoding/decoding software for GRIB and BUFR.

This is a useful set of command line tools to give quick access to grib messages.

ECMWF is the European Centre for Medium-Range Weather Forecasts.

ecKit is a cross-platform c++ toolkit that supports development of tools and applications at ECMWF. It is based on code developed over the last 20 years within the MARS software and was re-factored out to be reused by other applications. The main focus is UNIX/POSIX systems, and it has been thoroughly tested on AIX, Linux and Mac OSX. Historically, the code base pre-dates and in some way can be seen as a leaner substitute for some 'Boost' libraries.

ECMWF is the European Centre for Medium-Range Weather Forecasts.

The Interpolation library (EMOSLIB) includes Interpolation software and GRIB, BUFR, CREX encoding/decoding routines. It is used by the ECMWF meteorological archival and retrieval system (MARS) and also by the ECMWF graphics package MetView.

This package contains the static libraries and headers needed to build applications against libemos.

This is a toolkit from ECMWF to make ecKit interoperable with Fortran.

ECMWF is the European Centre for Medium-Range Weather Forecasts.

The FFTW library computes Fast Fourier Transforms (FFT) in one or more dimensions. It is extremely fast. This package contains the statically linked library, header files and test programs.

This package contains the header files and static libraries. For documentation, see libfftw3-doc.

The FFTW library computes Fast Fourier Transforms (FFT) in one or more dimensions. It is extremely fast. This package contains the documentation for the fftw3 library.

fpzip is a library and command-line utility for lossless and optionally lossy compression of 2D and 3D floating-point arrays. fpzip assumes spatially correlated scalar-valued data, such as regularly sampled continuous functions, and is not suitable for compressing unstructured streams of floating-point numbers. This package provides the headers and static library.

Gadap provides in-situ access to OpeNDAP data for GrADS, the Grid Analysis and Display System. This package provides development headers and static libraries for GADAP.

This package contains the static library, pkg-config files and include files needed to build with the General Cartographic Transformation Package library.

This is the libgrib2c library from NCEP for encoding and decoding 'GRIB2' data formats.

This package contains the static libraries and headers needed to build applications against libgrib2.

HDF-EOS4 is a software library designed built on HDF4 to support EOS-specific data structures, namely Grid, Point, and Swath. The new data structures are constructed from standard HDF data objects, using EOS conventions, through the use of a software library [1,4]. A key feature of HDF-EOS files is that instrument-independent services, such as subsetting by geolocation, can be applied to the files across a wide variety of data products.

This package contains include files and static libraries for HDF-EOS4.

HDF-EOS5 is a software library designed built on HDF5 to support EOS-specific data structures, namely Grid, Point, and Swath. The new data structures are constructed from standard HDF data objects, using EOS conventions, through the use of a software library. A key feature of HDF-EOS files is that instrument-independent services, such as subsetting by geolocation, can be applied to the files across a wide variety of data products.

This package contains include files and static libraries for HDF-EOS5.

LAPACK version 3.X is a comprehensive FORTRAN library that does linear algebra operations including matrix inversions, least squared solutions to linear sets of equations, eigenvector analysis, singular value decomposition, etc. It is a very comprehensive and reputable package that has found extensive use in the scientific community.

This package contains a static version of the library.

LAPACK version 3.X is a comprehensive FORTRAN library that does linear algebra operations including matrix inversions, least squared solutions to linear sets of equations, eigenvector analysis, singular value decomposition, etc. It is a very comprehensive and reputable package that has found extensive use in the scientific community.

This package contains:

• manpages of BLAS and LAPACK routines,
• the Lapack User's Guide manual (in HTML),
• the manual for the LAPACKE C interface to LAPACK (in PDF).

libLAS is a C/C++ library for reading and writing ASPRS LAS versions 1.0, 1.1 and 1.2 data. The LAS format is a sequential binary format used to store data from sensors and as intermediate processing storage by some LiDAR-related applications. LiDAR (Light Detection and Ranging) is an optical remote sensing technology that measures properties of scattered light to find range and/or other information of a distant target. The prevalent method to determine distance to an object or surface is to use laser pulses.

This package contains the development files to build applications in C++.

Magics++ is the latest generation of the ECMWF's Meteorological plotting software MAGICS. Although completely redesigned in C++, it is intended to be as backwards-compatible as possible with the Fortran interface. Besides its programming interfaces (Fortran and C), Magics++ offers MagML, a plot description language based on XML aimed at automatic web production.

This package includes the header files and static libraries needed to build against libmagics++.

MetKit is a toolkit from ECMWF for manipulating and describing meteorological objects, implementing the MARS language and associated processing and semantics.

This package provides shared libraries and headers.

This package provides development tools for developing applications of the NCARG command library, such as wrappers for compilation of NCL executables.

NetCDF (network Common Data Form) is a set of interfaces for array-oriented data access and a freely distributed collection of data access libraries for C, Fortran, C++, Java, and other languages. The netCDF libraries support a machine-independent format for representing scientific data. Together, the interfaces, libraries, and format support the creation, access, and sharing of scientific data.

This package provides headers.

OASIS3-MCT is a library for exchanging via MPI fields between components of climate models, such as atmosphere and ocean models. In addition, OASIS can perform interpolation between different grids used by the components, via the SCRIP library.

This package contains development files for building against OASIS3.

ODC is a software developed at ECMWF for encoding and processing of observational data. It includes a SQL filtering and statistics engine, command line tools and APIs for C/C++, Fortran and Python.

This package provides shared libraries and headers.

OpenTURNS is a powerful and generic tool to treat and quantify uncertainties in numerical simulations in design, optimization and control. It allows both sensitivity and reliability analysis studies:

• defining the outputs of interest and decision criterion;
• quantify and model the source of uncertainties;
• propagate uncertainties and/or analyse sensitivity and
• rank the sources of uncertainty

Targeted users are all engineers who want to introduce the probabilistic dimension in their so far deterministic studies.

This package contains development files needed to build OpenTURNS applications.

Proj and invproj perform respective forward and inverse transformation of cartographic data to or from Cartesian data with a wide range of selectable projection functions (over 100 projections).

Geod and invgeod perform geodesic (Great Circle) computations for determining latitude, longitude and back azimuth of a terminus point given a initial point latitude, longitude, azimuth and distance (direct) or the forward and back azimuths and distance between an initial and terminus point latitudes and longitudes (inverse).

This package provides the PROJ development files.

SpFFT was originally intended for transforms of data with spherical cutoff in frequency domain, as required by some computational material science codes. For distributed computations, SpFFT uses a slab decomposition in space domain and pencil decomposition in frequency domain (all sparse data within a pencil must be on one rank). If desired, the library can be compiled without any parallelization (MPI, OpenMP, CUDA / ROCm).

This package contains development files.

SPHEREPACK is a collection of FORTRAN programs that facilitates computer modeling of geophysical processes. The package contains programs for computing certain common differential operators including divergence, vorticity, gradients, and the Laplacian of both scalar and vector functions. Programs are also available for inverting these operators. For example, given divergence and vorticity, the package can be used to compute the velocity components. The Laplacian can also be inverted and therefore the package can be used to solve both the scalar and vector Poisson equations. Its use in model development is demonstrated by a sample program that solves the time-dependent non-linear shallow-water equations. Accurate solutions are obtained via the spectral method that uses both scalar and vector spherical harmonic transforms that are available to the user. The package also contains utility programs for computing the associated Legendre functions, Gauss points and weights, and multiple fast Fourier transforms. Programs are provided for both equally-spaced and Gauss distributed latitudinal points as well as programs that transfer data between these grids.

TerraLib enables quick development of custom-built geographical applications using spatial databases. As a research tool, TerraLib is aimed at providing a rich and powerful environment for the development of GIS research, enabling the development of GIS prototypes that include new concepts such as spatio-temporal data models, geographical ontologies and advanced spatial analysis techniques. TerraLib defines a geographical data model and provides support for this model over a range of different DBMS (MySQL, PostgreSQL, ORACLE and ACCESS), and is implemented as a library of C++ classes and functions, written in ANSI-C++.

This package contains development files for terralib.

The UDUNITS package supports units of physical quantities (e.g., meters, seconds). Specifically, it supports conversion between string and binary representations of units, arithmetic manipulation of units, and conversion of numeric values between compatible units. The package is written in the C programming language.

This package provides the include files and static libraries for development.

libwreport is a C++ library for working with weather reports.

The main feature of libwreport is a powerful decoder and encoder for the BUFR and CREX formats.

It also provides a useful abstraction to handle values found in weather reports, with awareness of significant digits, measurement units, variable descriptions, unit conversion and attributes on variables.

Features provided:

• Read and write BUFR version 2, 3, and 4
• Read and write CREX
• Unit conversion
• Handling of physical variables

Makedepf90 is a program for automatic creation of Makefile dependency lists for Fortran source code. Makedepf90 supports MODULE:s, INCLUDE:s, cpp #include:s, f90ppr $include:s and coco ??include:s and set-files.

The original idea was to provide the same functionality for Fortran as

   gcc -MM *.c

does for C.

This metapackage depends on the development files of the recommended MPI implementation for each platform, currently Open MPI on all of the platforms where it exists, and MPICH on the others. The package which this depends on has alternatives links for the shared libraries libmpi and libmpi++, and for compilers mpicc, mpic++/mpicxx/mpiCC, mpif77 and mpi90 and their manpages.

Contains the programs ncdump and ncgen which convert NetCDF files to ASCII and back, respectively. NetCDF (network Common Data Form) is an interface for scientific data access and a freely-distributed software library that provides an implementation of the interface. The netCDF library also defines a machine-independent format for representing scientific data. Together, the interface, library, and format support the creation, access, and sharing of scientific data.

The Common Data Access framework allows reading of scientific data from various data formats, including structured ascii, structured binary, XML, netCDF, CDF, HDF4, HDF5, GRIB, RINEX and SP3. It provides a single consistent hierarchical view on data independent of the underlying storage format.

This package contains Python3 wrappers to use the CODA framework.

Open-source Python library for the exploratory analysis of spatial data. A subpackage of PySAL (Python Spatial Analysis Library), it is under active development and includes methods for global and local spatial autocorrelation analysis.

This package installs the library for Python 3.

This python wrapper is designed to tightly integrate with PyOpenCL. It consists of a low-level Cython based wrapper with an interface similar to the underlying C library. On top of that it offers a high-level interface designed to work on data contained in instances of pyopencl.array.Array, a numpy work-alike array class for GPU computations. The high-level interface takes some inspiration from pyFFTW. For details of the high-level interface see fft.py.

This package installs the library for Python 3.

OpenTURNS is a powerful and generic tool to treat and quantify uncertainties in numerical simulations in design, optimization and control. It allows both sensitivity and reliability analysis studies:

• defining the outputs of interest and decision criterion;
• quantify and model the source of uncertainties;
• propagate uncertainties and/or analyse sensitivity and
• rank the sources of uncertainty

Targeted users are all engineers who want to introduce the probabilistic dimension in their so far deterministic studies.

This package provides the Python3 bindings to the library.

Pythonic wrapper around FFTW, the speedy FFT library. The ultimate aim is to present a unified interface for all the possible transforms that FFTW can perform.

Both the complex DFT and the real DFT are supported, as well as arbitrary axes of abitrary shaped and strided arrays, which makes it almost feature equivalent to standard and real FFT functions of numpy.fft (indeed, it supports the clongdouble dtype which numpy.fft does not).

pyFFTW is BSD-licensed and should not be confused with python-fftw, a GPL-licensed python module with the same aim of providing python bindings to FFTW3. Or python3-gpyfft, which provides bindings to the OpenCL FFT library clFFT.

This package provides the Python 3 bindings.

PySwarms is an extensible research toolkit for particle swarm optimization (PSO) in Python.

It is intended for swarm intelligence researchers, practitioners, and students who prefer a high-level declarative interface for implementing PSO in their problems. PySwarms enables basic optimization with PSO and interaction with swarm optimizations.

Features:

• High-level module for Particle Swarm Optimization
• Built-in objective functions to test optimization algorithms
• Plotting environment for cost histories and particle movement
• Hyperparameter search tools to optimize swarm behaviour

This package contains the Python 3.x version of PySwarms.

sasmodels is a Python module for calculating theoretical Small Angle Scattering patterns. The models provided are usable directly in the bumps fitting package and in the sasview analysis package.

This package contains the Python 3 version of the module.

Ulmo retrieves and parses datasets from the web, and returns simple Python data structures that can be easily pulled into more sophisticated tools such as pandas. It caches datasets locally and harvests updates as needed.

A variety of datasets and services are supported, including the USGS National Water Information System, USGS National Elevation Dataset services, USGS Earth Resources Observation Systems services, NASA Daymet weather data, and several more both available and planned.

This package contains the Python 3 version of ulmo.

This package provides an R interface to Unidata's NetCDF library functions. NetCDF (network Common Data Form) is a set of interfaces for array-oriented data access. In addition to the interface to the NetCDF library functions, R interfaces are provided to access Unidata's UDUNITS calendar conversions.

This library computes FFTs in one or more dimensions. It is extremely fast. This package contains the statically linked library and the header files.

WCSLIB is a C library, supplied with a full set of Fortran wrappers, that implements the "World Coordinate System" (WCS) standard in FITS (Flexible Image Transport System).

PGSBOX draws and labels a curvilinear coordinate grid. The caller must provide a separate external function, NLFUNC, to define the non-linear coordinate transformation.

This package contains the static libraries and the C header files.

WCSLIB is a C library, supplied with a full set of Fortran wrappers, that implements the "World Coordinate System" (WCS) standard in FITS (Flexible Image Transport System).

This package contains the API documentation for WCSLIB.

This is the GNU Fortran 95 compiler, which compiles Fortran 95 on platforms supported by the gcc compiler. It uses the gcc backend to generate optimized code.

This is a dependency package providing the default GNU Fortran 95 compiler.

This is a transitional package for ksh, it can be safely removed.

pkgconf is an implementation of the pkg-config system, which helps to configure compiler and linker flags for development frameworks.

pkgconf is a replacement for pkg-config, providing additional functionality while also maintaining compatibility.

This module is intended to help parse time values represented using the COARDS convention.

What is COARDS?

The Cooperative Ocean-Atmosphere Research Data Service (COARDS) is joint project between NOAA labs and universities. It is a World-Wide-Web-based system to locate and retrieve important climate data sets and perform "live access" visualizations of selected subsets. Scientists at each of the cooperating sites and elsewhere can use COARDS to quickly gain access to oceanographic and atmospheric data sets. COARDS is a true "virtual data center" where a user can download data from any participating site without being concerned as where it actually resides.

This package provides the library for Python 3.

Thread-pool Controls provides Python helpers to limit the number of threads used in the threadpool-backed of common native libraries used for scientific computing and data science (e.g. BLAS and OpenMP).

Fine control of the underlying thread-pool size can be useful in workloads that involve nested parallelism so as to mitigate oversubscription issues.

udunits is a utility for handling units of physical quantities. It supports conversion between string and binary representations of units, arithmetic manipulation of units, and conversion of numeric values between compatible units. The package is written in the C programming language.

This package is a binary incompatible upgrade to the blas-dev package. Several minor changes to the C interface have been incorporated.

BLAS (Basic Linear Algebra Subroutines) is a set of efficient routines for most of the basic vector and matrix operations. They are widely used as the basis for other high quality linear algebra software, for example lapack and linpack. This implementation is the Fortran 77 reference implementation found at netlib.

This implementation of the library belongs to the CLAPACK distribution.

This package contains a static version of the library.

MBDyn is the first free general purpose Multibody Dynamics analysis software.

MBDyn features the integrated multidisciplinary simulation of multibody, multiphysics systems, including nonlinear mechanics of rigid and flexible bodies (geometrically exact & composite-ready beam and shell finite elements, component mode synthesis elements, lumped elements) subjected to kinematic constraints, along with smart materials, electric networks, active control, hydraulic networks, and essential fixed-wing and rotorcraft aerodynamics.

MBDyn simulates the behavior of heterogeneous mechanical, aeroservoelastic systems based on first principles equations.

MBDyn can be easily coupled to external solvers for co-simulation of multiphysics problems, e.g. Computational Fluid Dynamics, terradynamics, block-diagram solvers like Scicos, Scicoslab and Simulink, using C, C++ or Python peer-side API.

MBDyn is being actively developed and used in the aerospace (aircraft, helicopters, tiltrotors, spacecraft), wind energy (wind turbines), automotive (cars, trucks) and mechatronic fields (industrial robots, parallel robots, micro aerial vehicles) for the analysis and simulation of the dynamics of complex systems.

This package contains the development files.