DebiChem Project
Summary
Molecular Modelling
DebiChem 3D Molecular Modelling and Visualization

This metapackage will install 3D Molecular Modelling and Visualization which might be useful for chemists.

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Description

For a better overview of the project's availability as a Debian package, each head row has a color code according to this scheme:

If you discover a project which looks like a good candidate for DebiChem to you, or if you have prepared an unofficial Debian package, please do not hesitate to send a description of that project to the DebiChem mailing list

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DebiChem Molecular Modelling packages

Official Debian packages with high relevance

avogadro
??? missing short description for package avogadro :-(
Versions of package avogadro
ReleaseVersionArchitectures
sid1.101.0-1amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
bookworm1.97.0-1amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
trixie1.100.0-2amd64,arm64,armel,armhf,i386,ppc64el,riscv64,s390x
forky1.101.0-1amd64,arm64,armhf,i386,ppc64el,riscv64,s390x
bullseye1.93.0-2amd64,arm64,armhf,i386
upstream2.0.0
Debtags of package avogadro:
fieldchemistry
roleprogram
uitoolkitqt
useviewing
Popcon: 55 users (76 upd.)*
Newer upstream!
 License: DFSG free
Git
Please cite: Marcus D Hanwell, Donald E Curtis, David C Lonie, Tim Vandermeersch, Eva Zurek and Geoffrey R Hutchison: Avogadro: An advanced semantic chemical editor, visualization, and analysis platform. (eprint) J. Cheminf. 4:17 (2012)
Registry entries: Bio.tools  SciCrunch 
Other screenshots of package avogadro
VersionURL
1.0.1-3+b1https://screenshots.debian.net/screenshot/avogadro/8025
 Screenshots of package avogadro
ballview
??? missing short description for package ballview :-(
Versions of package ballview
ReleaseVersionArchitectures
bookworm1.5.0+git20180813.37fc53c-11amd64,arm64,i386,mips64el,mipsel,ppc64el,s390x
sid1.5.0+git20220524.d85d2dd-5amd64,arm64,i386,loong64,ppc64el,riscv64,s390x
bullseye1.5.0+git20180813.37fc53c-6amd64,arm64,i386
upstream1.5.0+git20260515.70e23cd
Debtags of package ballview:
interfacex11
roleprogram
uitoolkitqt
x11application
Popcon: 4 users (5 upd.)*
Newer upstream!
 License: DFSG free
Git
Please cite: Andreas Moll, Andreas Hildebrandt, Hans-Peter Lenhof and Oliver Kohlbacher: BALLView: a tool for research and education in molecular modeling. (PubMed,eprint) Bioinformatics 22(3):365-366 (2006)
Registry entries: SciCrunch 
Screenshots of package ballview
ghemical
??? missing short description for package ghemical :-(
Versions of package ghemical
ReleaseVersionArchitectures
bullseye3.0.0-5amd64,arm64,armhf,i386
bookworm3.0.0-5amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
Debtags of package ghemical:
fieldchemistry
interface3d, x11
roleprogram
suitegnome
uitoolkitgtk
useediting, learning, viewing
works-with3dmodel
x11application
Popcon: 4 users (1 upd.)*
Versions and Archs
 License: DFSG free
Git
Registry entries: Bio.tools  SciCrunch 
Screenshots of package ghemical
mmb
??? missing short description for package mmb :-(
Versions of package mmb
ReleaseVersionArchitectures
sid4.2+dfsg-2amd64,arm64,loong64,ppc64el,riscv64,s390x
trixie4.0.0+dfsg-5amd64,arm64,ppc64el,riscv64,s390x
experimental4.0.0+dfsg-3.1~exp1amd64,arm64,armhf
bookworm4.0.0+dfsg-2amd64,arm64
bullseye3.2+dfsg-2+deb11u1amd64,arm64
forky4.2+dfsg-2amd64,arm64,loong64,ppc64el,riscv64,s390x
Popcon: 12 users (35 upd.)*
Versions and Archs
 License: DFSG free
Git
openstructure
??? missing short description for package openstructure :-(
Versions of package openstructure
ReleaseVersionArchitectures
bookworm2.3.1-9amd64,mips64el,mipsel
trixie2.9.3-2amd64,i386
forky2.11.1-3amd64,i386,loong64
sid2.11.1-3amd64,i386,loong64
bullseye2.2.0-6amd64
Popcon: 7 users (0 upd.)*
Versions and Archs
 License: DFSG free
Git
promod3
??? missing short description for package promod3 :-(
Versions of package promod3
ReleaseVersionArchitectures
bookworm3.2.1+ds-6amd64
trixie3.4.2+ds-1all
forky3.6.0+ds-1all
sid3.6.0+ds-1all
Popcon: 0 users (0 upd.)*
Versions and Archs
 License: DFSG free
Git
Please cite: Gabriel Studer, Gerardo Tauriello, Stefan Bienert, Marco Biasini, Niklaus Johner and Torsten Schwede: ProMod3—A versatile homology modelling toolbox. PLOS Computational Biology 17(1):e1008667 (2021)
pymol
??? missing short description for package pymol :-(
Versions of package pymol
ReleaseVersionArchitectures
sid3.1.0+dfsg-1all
forky3.1.0+dfsg-1all
trixie3.1.0+dfsg-1all
bookworm2.5.0+dfsg-1all
bullseye2.4.0+dfsg-2all
Debtags of package pymol:
fieldbiology:structural, chemistry
interface3d, x11
roleprogram
scopeutility
uitoolkittk
uselearning, viewing
works-withimage
x11application
Popcon: 59 users (54 upd.)*
Versions and Archs
 License: DFSG free
Git
Registry entries: Bio.tools  SciCrunch 
Topics:
Other screenshots of package pymol
VersionURL
1.2r2-1.1+b1https://screenshots.debian.net/screenshot/pymol/8024
 Screenshots of package pymol

No known packages available

nmoldyn
interactive analysis program for Molecular Dynamics simulations
License: unknown
Debian package not available

nMOLDYN is especially designed for the computation and decomposition of neutron scattering spectra, but also computes other quantities.
*Popularitycontest results: number of people who use this package regularly (number of people who upgraded this package recently) out of 283727