Debian Med Project
Help us to see Debian used by medical practitioners and biomedical researchers! Join us on the Alioth page.
Summary
Bugs of task bio-ngs
Total bugs: 15
Open bugs: 14
Fixed bugs: 1
Links to other tasks
Biology 119 (849)
Phylogeny 8 (66)
Cloud 40 (324)
Medical data 1 (9)
Dental 0 (0)
Epidemiology 0 (0)
Imaging 178 (940)
Laboratory 0 (0)
Oncology 1 (15)
Pharmacology 1 (9)
Physics 31 (273)
Practice 2 (9)
Psychology 6 (63)
Research 0 (0)
Statistics 2 (6)
Tools 34 (204)
Typesetting 95 (523)
Legend
SeverityDependentSuggested
critical 0 0
grave 0 0
serious 1 0
important 3 0
normal 5 0
minor 0 0
wishlist 5 0

Summary bugs page of task Next generation sequencing

Immediately looking into bugs of the dependencies of this task is advised (120)*

Open bugs in dependent packages

1 serious, 3 important, 5 normal, 5 wishlist
819617 FTBFS: any-i386 - floating point idiosyncracies
860682 bcftools: FTBFS on i386: Test failures sid, stretch
747337 broken autopkgtest: missing dependency, not testing installed package, test failures upstream
860655 blasr: FTBFS on i386: unsatisfiable build-dependencies: libpbseq-dev (>= 0~20160912), libpbbam-dev sid, stretch
853859 bwa: Segmentation fault with specific data set
853396 fastx-toolkit: ftbfs with GCC-7 buster, sid
848335 Filo should be removed from Debian after Stretch release since it is unmaintained and can be replaced newcomer
749367 htslib FTBFS on testing for mips/mipsel moreinfo, patch, sid, stretch
774109 htslib: FTBFS on hppa
800469 htslib FTBFS on armhf, bus error. patch, sid, stretch
849667 htslib: FTBFS on armhf: [test] Bus error patch, sid, stretch
860672 mhap: FTBFS on i386: build-dependency not installable: libssw-java sid, stretch
820308 qiime: many unsatisfiable dependencies
780816 tophat: contains and uses convience copy of samtools 0.1.18

Open bugs in suggested packages

Done bugs

848334 src:picard-tools: Please add autopkgtest newcomer
*To estimate the overall status of the packages in the dependencies of a metapackage a weighted severity is calculated. Done bugs are ignored and bugs in dependent and recommended packages are weighted by factor three compared to suggested packages. Release critical bugs have a much larger weight than important, while the contribution of normal bugs is even smaller and minor bugs have a very small weight. Wishlist bugs are ignored in this calculation. The resulting sum is compared to some boundaries to find a verbal form. The actual numbers need some adjustment to make real sense - this evaluation method is in testing phase.
The severities of bugs are weighted as follows:
critical10
grave10
serious10
important5
normal3
minor1
wishlist0
Last update: Mon, 29 May 2017 06:20:20 -0000