Summary

Bugs of task bio-ngs

Total bugs: 6

Open bugs: 3

Fixed bugs: 3

Links to other tasks

Tasks overview

Biology 232 (1953)

Biology development 135 (1476)

Next generation sequencing 3 (9)

Phylogeny 11 (108)

Cloud 38 (378)

Content management 0 (0)

Covid-19 205 (2239)

Medical data 0 (0)

Dental 3 (21)

Epidemiology 29 (393)

Hospital information systems 0 (0)

Imaging 218 (960)

Imaging development 84 (618)

Laboratory 1 (30)

Oncology 0 (0)

Pharmacology 1 (15)

Physics 27 (240)

Practice 6 (45)

Psychology 17 (154)

Rehabilitation 0 (0)

Research 0 (0)

Statistics 8 (12)

Tools 36 (240)

Typesetting 72 (626)

Legend

Severity	Dependent	Suggested
critical	0	0
grave	0	0
serious	0	0
important	0	0
normal	0	0
minor	3	0
wishlist	0	0

Summary bugs page of task Next generation sequencing

Task is in very good shape^*

Open bugs in dependent packages

3 minor

bedtools (2) Homepage: https://github.com/arq5x/bedtools2 Vcs Debian Med Packaging Team
1104751	bedtools: FTBFS with GNUMAKEFLAGS=--shuffle=random	patch
1105730	bedtools: FTBFS with make --shuffle=random: src/utils/version/version.cpp:2:10: fatal error: version_git.h: No such file or directory	forky, ftbfs, sid, trixie
velvet (1) Homepage: https://github.com/dzerbino/velvet Vcs Debian Med Packaging Team
1105569	velvet: FTBFS with make --shuffle=reverse: Fatal error: can't create obj/autoOpen.o: No such file or directory	forky, ftbfs, sid, trixie

Open bugs in suggested packages

Done bugs

last-align (1) Homepage: https://gitlab.com/mcfrith/last Vcs Debian Med Packaging Team
1048396	last-align: Fails to build source after successful build	forky, ftbfs, sid, trixie
python-anndata (2) Homepage: https://github.com/scverse/anndata Vcs Debian Med Packaging Team
1114293	python-anndata: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.13 returned exit code 13	forky, ftbfs, sid
1123524	python-anndata: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.14 3.13" returned exit code 13	forky, ftbfs, sid

^*To estimate the overall status of the packages in the dependencies of a metapackage a weighted severity is calculated. Done bugs are ignored and bugs in dependent and recommended packages are weighted by factor three compared to suggested packages. Release critical bugs have a much larger weight than important, while the contribution of normal bugs is even smaller and minor bugs have a very small weight. Wishlist bugs are ignored in this calculation. The resulting sum is compared to some boundaries to find a verbal form. The actual numbers need some adjustment to make real sense - this evaluation method is in testing phase.
The severities of bugs are weighted as follows:

critical	10
grave	10
serious	10
important	5
normal	3
minor	1
wishlist	0