Debian Med Project
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Summary
Bugs of task bio-ngs
Total bugs: 5
Open bugs: 0
Fixed bugs: 5
Links to other tasks
Tasks overview
Biology 236 (2415)
Biology development 127 (1308)
Phylogeny 10 (120)
Cloud 35 (395)
Covid-19 196 (2187)
Medical data 0 (0)
Dental 3 (21)
Epidemiology 20 (277)
Imaging 208 (1048)
Laboratory 1 (30)
Oncology 0 (0)
Pharmacology 1 (30)
Physics 32 (330)
Practice 8 (60)
Psychology 16 (150)
Research 0 (0)
Statistics 8 (12)
Tools 36 (233)
Typesetting 75 (647)
Legend
SeverityDependentSuggested
critical 0 0
grave 0 0
serious 0 0
important 0 0
normal 0 0
minor 0 0
wishlist 0 0

Summary bugs page of task Next generation sequencing

Task is in excellent shape*

Open bugs in dependent packages

Open bugs in suggested packages

Done bugs

bedtools (1) Homepage: https://github.com/arq5x/bedtools2 Vcs Debian Med Packaging Team
1105730 bedtools: FTBFS with make --shuffle=random: src/utils/version/version.cpp:2:10: fatal error: version_git.h: No such file or directory forky, ftbfs, sid, trixie
last-align (1) Homepage: https://gitlab.com/mcfrith/last Vcs Debian Med Packaging Team
1048396 last-align: Fails to build source after successful build forky, ftbfs, sid, trixie
sra-sdk (2) Homepage: https://github.com/ncbi/sra-tools/ Vcs Debian Med Packaging Team
1126172 sra-sdk ftbfs with abseil 20260107 forky, ftbfs, sid
1128753 sra-sdk: FTBFS with glibc 2.43 due to ISO C23 const return types ftbfs, upstream
velvet (1) Homepage: https://github.com/dzerbino/velvet Vcs Debian Med Packaging Team
1105569 velvet: FTBFS with make --shuffle=reverse: Fatal error: can't create obj/autoOpen.o: No such file or directory forky, ftbfs, sid, trixie
*To estimate the overall status of the packages in the dependencies of a metapackage a weighted severity is calculated. Done bugs are ignored and bugs in dependent and recommended packages are weighted by factor three compared to suggested packages. Release critical bugs have a much larger weight than important, while the contribution of normal bugs is even smaller and minor bugs have a very small weight. Wishlist bugs are ignored in this calculation. The resulting sum is compared to some boundaries to find a verbal form. The actual numbers need some adjustment to make real sense - this evaluation method is in testing phase.
The severities of bugs are weighted as follows:
critical10
grave10
serious10
important5
normal3
minor1
wishlist0
Last update: Mon, 16 Mar 2026 17:02:54 -0000