Summary

Bugs of task bio-ngs

Total bugs: 5

Open bugs: 3

Fixed bugs: 2

Links to other tasks

Tasks overview

Biology 242 (2172)

Biology development 133 (1367)

Next generation sequencing 3 (54)

Phylogeny 10 (105)

Cloud 39 (446)

Content management 0 (0)

Covid-19 192 (2044)

Medical data 1 (1)

Dental 3 (21)

Epidemiology 20 (277)

Hospital information systems 0 (0)

Imaging 203 (849)

Imaging development 86 (693)

Laboratory 1 (30)

Oncology 0 (0)

Pharmacology 1 (30)

Physics 33 (318)

Practice 9 (51)

Psychology 16 (159)

Rehabilitation 0 (0)

Research 0 (0)

Statistics 8 (12)

Tools 37 (234)

Typesetting 73 (629)

Legend

Severity	Dependent	Suggested
critical	0	0
grave	0	0
serious	1	0
important	1	0
normal	1	0
minor	0	0
wishlist	0	0

Summary bugs page of task Next generation sequencing

Looking into bugs of this task is recommended^*

Open bugs in dependent packages

1 serious, 1 important, 1 normal

last-align (1) Homepage: https://gitlab.com/mcfrith/last Vcs Debian Med Packaging Team
1048396	last-align: Fails to build source after successful build	forky, ftbfs, sid, trixie
sra-sdk (2) Homepage: https://github.com/ncbi/sra-tools/ Vcs Debian Med Packaging Team
1126172	sra-sdk ftbfs with abseil 20260107	forky, ftbfs, sid
1128753	sra-sdk: FTBFS with glibc 2.43 due to ISO C23 const return types	ftbfs, upstream

Open bugs in suggested packages

Done bugs

bedtools (1) Homepage: https://github.com/arq5x/bedtools2 Vcs Debian Med Packaging Team
1105730	bedtools: FTBFS with make --shuffle=random: src/utils/version/version.cpp:2:10: fatal error: version_git.h: No such file or directory	forky, ftbfs, sid, trixie
velvet (1) Homepage: https://github.com/dzerbino/velvet Vcs Debian Med Packaging Team
1105569	velvet: FTBFS with make --shuffle=reverse: Fatal error: can't create obj/autoOpen.o: No such file or directory	forky, ftbfs, sid, trixie

^*To estimate the overall status of the packages in the dependencies of a metapackage a weighted severity is calculated. Done bugs are ignored and bugs in dependent and recommended packages are weighted by factor three compared to suggested packages. Release critical bugs have a much larger weight than important, while the contribution of normal bugs is even smaller and minor bugs have a very small weight. Wishlist bugs are ignored in this calculation. The resulting sum is compared to some boundaries to find a verbal form. The actual numbers need some adjustment to make real sense - this evaluation method is in testing phase.
The severities of bugs are weighted as follows:

critical	10
grave	10
serious	10
important	5
normal	3
minor	1
wishlist	0