Debian Med Project
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Summary
Bugs of task bio-ngs
Total bugs: 7
Open bugs: 5
Fixed bugs: 2
Links to other tasks
Biology 273 (2565)
Biology development 133 (1210)
Phylogeny 13 (177)
Cloud 55 (648)
Covid-19 188 (1863)
Medical data 0 (0)
Dental 2 (12)
Epidemiology 18 (204)
Imaging 202 (837)
Laboratory 1 (9)
Oncology 1 (3)
Pharmacology 1 (9)
Physics 24 (159)
Practice 6 (45)
Psychology 11 (133)
Research 0 (0)
Statistics 4 (16)
Tools 35 (227)
Typesetting 80 (623)
Legend
SeverityDependentSuggested
critical 0 0
grave 0 0
serious 0 2
important 0 0
normal 0 1
minor 2 0
wishlist 0 0

Summary bugs page of task Next generation sequencing

Task is in good shape*

Open bugs in dependent packages

2 minor
1104751 bedtools: FTBFS with GNUMAKEFLAGS=--shuffle=random patch
1048396 last-align: Fails to build source after successful build ftbfs, sid, trixie

Open bugs in suggested packages

2 serious, 1 normal
1075928 python-anndata: tests fail with scipy 1.13
1094924 python-anndata compatibility with zarr3 fixed-upstream, ftbfs, sid, trixie
1100261 python-anndata: FTBFS: E AttributeError: module 'zarr' has no attribute 'DirectoryStore' fixed-upstream, ftbfs, sid, trixie

Done bugs

1097930 sra-sdk: ftbfs with GCC-15 forky, sid
1103330 sra-sdk: FTBFS with the nocheck build profile ftbfs, sid, trixie
*To estimate the overall status of the packages in the dependencies of a metapackage a weighted severity is calculated. Done bugs are ignored and bugs in dependent and recommended packages are weighted by factor three compared to suggested packages. Release critical bugs have a much larger weight than important, while the contribution of normal bugs is even smaller and minor bugs have a very small weight. Wishlist bugs are ignored in this calculation. The resulting sum is compared to some boundaries to find a verbal form. The actual numbers need some adjustment to make real sense - this evaluation method is in testing phase.
The severities of bugs are weighted as follows:
critical10
grave10
serious10
important5
normal3
minor1
wishlist0
Last update: Fri, 09 May 2025 04:23:32 -0000