Summary

Bugs of task bio-phylogeny

Total bugs: 13

Open bugs: 10

Fixed bugs: 3

Links to other tasks

Tasks overview

Biology 231 (1792)

Biology development 113 (810)

Next generation sequencing 4 (57)

Phylogeny 10 (60)

Cloud 43 (441)

Content management 0 (0)

Covid-19 146 (1367)

Medical data 1 (1)

Dental 1 (3)

Epidemiology 8 (110)

Hospital information systems 1 (9)

Imaging 211 (1005)

Imaging development 84 (728)

Laboratory 1 (9)

Oncology 1 (3)

Pharmacology 1 (9)

Physics 25 (189)

Practice 7 (48)

Psychology 7 (55)

Rehabilitation 0 (0)

Research 0 (0)

Statistics 3 (7)

Tools 38 (241)

Typesetting 62 (499)

Legend

Severity	Dependent	Suggested
critical	0	0
grave	0	0
serious	1	0
important	1	0
normal	0	0
minor	5	0
wishlist	3	0

Summary bugs page of task Phylogeny

Looking into bugs of this task is recommended^*

Open bugs in dependent packages

1 serious, 1 important, 5 minor, 3 wishlist

altree (1) Homepage: https://gitlab.inria.fr/NGS/ALTree Vcs Debian Med Packaging Team
1067631	src:altree: autopkgtest timeouts on armel, armhf and ppc64el
beast-mcmc (2) Homepage: http://beast.bio.ed.ac.uk/ Vcs Debian Med Packaging Team
1025424	beast-mcmc: please enable autopkgtest	help
1043640	beast-mcmc: Fails to build source after successful build	ftbfs, sid, trixie
pplacer (2) Homepage: https://github.com/matsen/pplacer Vcs Debian Med Packaging Team
1009156	pplacer: Add autopkgtest
1024889	pplacer: build-depends on dropped package
proalign (1) Homepage: http://loytynojalab.biocenter.helsinki.fi/software/proalign/ Vcs Debian Med Packaging Team
1046067	proalign: Fails to build source after successful build	ftbfs, sid, trixie
t-coffee (1) Homepage: https://www.tcoffee.org/Projects/tcoffee/index.html Vcs Debian Med Packaging Team
956848	t-coffee: should use "example" blastpgp.pl
tree-puzzle (1) Homepage: http://www.tree-puzzle.de Vcs Debian Med Packaging Team
1049170	tree-puzzle: Fails to build source after successful build	ftbfs, sid, trixie
treeview (1) Homepage: http://jtreeview.sourceforge.net Vcs Debian Med Packaging Team
1046737	treeview: Fails to build source after successful build	ftbfs, sid, trixie
treeviewx (1) Homepage: https://github.com/rdmpage/treeviewx Vcs Debian Med Packaging Team
846481	src:treeviewx: Please remove statically linked code copy of libncl

Open bugs in suggested packages

Done bugs

fastdnaml (1) Homepage: ftp://ftp.bio.indiana.edu/molbio/evolve/fastdnaml/fastDNAml.html Vcs Debian Med Packaging Team
1066709	fastdnaml: FTBFS: fastDNAml.h:228:28: error: implicit declaration of function âfreeâ [-Werror=implicit-function-declaration]	ftbfs, sid, trixie
phylip (1) Homepage: https://evolution.genetics.washington.edu/phylip.html Vcs Debian Med Packaging Team
1066595	phylip: FTBFS: drawgram.c:2111:9: error: implicit declaration of function âmakeboxâ [-Werror=implicit-function-declaration]	ftbfs, sid, trixie
populations (1) Homepage: https://www.bioinformatics.org/~tryphon/populations/ Vcs Debian Med Packaging Team
1068424	populations - still depends on old libqt5gui5 after binnmu	sid, trixie

^*To estimate the overall status of the packages in the dependencies of a metapackage a weighted severity is calculated. Done bugs are ignored and bugs in dependent and recommended packages are weighted by factor three compared to suggested packages. Release critical bugs have a much larger weight than important, while the contribution of normal bugs is even smaller and minor bugs have a very small weight. Wishlist bugs are ignored in this calculation. The resulting sum is compared to some boundaries to find a verbal form. The actual numbers need some adjustment to make real sense - this evaluation method is in testing phase.
The severities of bugs are weighted as follows:

critical	10
grave	10
serious	10
important	5
normal	3
minor	1
wishlist	0