Summary

Bugs of task bio-phylogeny

Total bugs: 9

Open bugs: 7

Fixed bugs: 2

Links to other tasks

Tasks overview

Biology 169 (1425)

Biology development 88 (893)

Next generation sequencing 0 (0)

Phylogeny 7 (30)

Cloud 28 (239)

Content management 0 (0)

Covid-19 177 (1678)

Medical data 0 (0)

Dental 2 (18)

Epidemiology 16 (193)

Hospital information systems 1 (9)

Imaging 213 (934)

Imaging development 64 (426)

Laboratory 0 (0)

Oncology 0 (0)

Pharmacology 2 (60)

Physics 25 (180)

Practice 8 (69)

Psychology 20 (107)

Rehabilitation 0 (0)

Research 0 (0)

Statistics 14 (30)

Tools 34 (227)

Typesetting 73 (630)

Legend

Severity	Dependent	Suggested
critical	0	0
grave	0	0
serious	0	0
important	1	0
normal	1	0
minor	2	0
wishlist	3	0

Summary bugs page of task Phylogeny

Consider looking into bugs of this task^*

Open bugs in dependent packages

1 important, 1 normal, 2 minor, 3 wishlist

altree (1) Homepage: https://gitlab.inria.fr/NGS/ALTree Vcs Debian Med Packaging Team
1067631	src:altree: autopkgtest timeouts on armel, armhf and ppc64el	confirmed, help
beast-mcmc (1) Homepage: http://beast.bio.ed.ac.uk/ Vcs Debian Med Packaging Team
1025424	beast-mcmc: please enable autopkgtest	help
hmmer (1) Homepage: http://hmmer.org/ Vcs Debian Med Packaging Team
1120150	hmmer: Ship easel miniapps instead of easel source code.
jmodeltest (1) Homepage: https://github.com//ddarriba/jmodeltest2 Vcs Debian Med Packaging Team
1095078	jmodeltest: reduce the permissions on /var/log/jmodeltest
muscle (1) Homepage: https://www.drive5.com/muscle/ Vcs Debian Med Packaging Team
1105460	muscle: FTBFS with make --shuffle=reverse: Fatal error: can't create Linux/usage.o: No such file or directory	forky, ftbfs, sid, trixie
t-coffee (1) Homepage: https://www.tcoffee.org/Projects/tcoffee/index.html Vcs Debian Med Packaging Team
956848	t-coffee: should use "example" blastpgp.pl
treeviewx (1) Homepage: https://github.com/rdmpage/treeviewx Vcs Debian Med Packaging Team
846481	src:treeviewx: Please remove statically linked code copy of libncl

Open bugs in suggested packages

Done bugs

mrbayes (1) Homepage: http://mrbayes.csit.fsu.edu/ Vcs Debian Med Packaging Team
1143178	mrbayes-mpi: Spawns instances of regular mb instead of running one parallel instance
proalign (1) Homepage: http://loytynojalab.biocenter.helsinki.fi/software/proalign/ Vcs Debian Med Packaging Team
1150990	convert proalign to Architecture: all	patch

^*To estimate the overall status of the packages in the dependencies of a metapackage a weighted severity is calculated. Done bugs are ignored and bugs in dependent and recommended packages are weighted by factor three compared to suggested packages. Release critical bugs have a much larger weight than important, while the contribution of normal bugs is even smaller and minor bugs have a very small weight. Wishlist bugs are ignored in this calculation. The resulting sum is compared to some boundaries to find a verbal form. The actual numbers need some adjustment to make real sense - this evaluation method is in testing phase.
The severities of bugs are weighted as follows:

critical	10
grave	10
serious	10
important	5
normal	3
minor	1
wishlist	0