Debian Med Project
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Summary
Bugs of task cloud
Total bugs: 45
Open bugs: 37
Fixed bugs: 8
Links to other tasks
Biology 167 (1428)
Phylogeny 3 (21)
Cloud 37 (315)
Covid-19 134 (1151)
Medical data 1 (3)
Dental 0 (0)
Epidemiology 3 (18)
Imaging 231 (1075)
Laboratory 1 (9)
Oncology 3 (48)
Pharmacology 1 (9)
Physics 25 (180)
Practice 3 (27)
Psychology 7 (65)
Research 0 (0)
Statistics 0 (0)
Tools 33 (218)
Typesetting 67 (538)
Legend
SeverityDependentSuggested
critical 0 0
grave 0 0
serious 0 0
important 6 0
normal 24 0
minor 3 0
wishlist 4 0

Summary bugs page of task Cloud

Immediately looking into bugs of the dependencies of this task is advised (315)*

Open bugs in dependent packages

6 important, 24 normal, 3 minor, 4 wishlist
920282 abyss fails to build on hurd - googletest EXPECT_DEATH
967243 acedb: depends on deprecated GTK 2
865130 reapr FTBFS on big endian: Error sampling from files '00.Sample/fragCov.gz', '00.assembly.fa.gc.gz' ftbfs, upstream
983981 bamtools: ftbfs with GCC-11 bookworm, sid
962675 can cdbfasta be marked Multi-Arch: foreign?
978784 clustalw: ftbfs with autoconf 2.70 bookworm, sid
982869 datamash FTBFS on !x86 32bit: FAIL: tests/decorate-errors ftbfs, upstream
984036 disulfinder: ftbfs with GCC-11 bookworm, sid
984042 dssp: ftbfs with GCC-11 bookworm, sid
682042 emboss-data: ships bulky taxonomy and gene ontology data
982036 emboss: FTBFS with OpenJDK 17 due to com.sun.net.ssl removal bookworm, ftbfs, help, sid
986043 emboss: uses media types that are not registered
644397 Provide runtime detection for CPU SIMD capabilities upstream
921784 gromacs: unhelpful error message from mpicxx.openmpi unreproducible
983942 gromacs: ftbfs with -march=x86-64-v3
984161 gromacs: ftbfs with GCC-11 bookworm, sid
978835 htslib: ftbfs with autoconf 2.70 bookworm, sid
978841 infernal: ftbfs with autoconf 2.70 bookworm, sid
978843 jellyfish: ftbfs with autoconf 2.70 bookworm, sid
983273 jellyfish: Homepage: needs updating
984226 mapsembler2: ftbfs with GCC-11 bookworm, sid
984243 mothur: ftbfs with GCC-11 bookworm, sid
956751 mummerplot incompatible with Debian's version of gnuplot
891197 Please switch to pcre2
956850 ncbi-blast+: Please provide /usr/bin/legacy_blast.pl
984871 ncbi-blast+: Missing headers for shared libraries
225651 ncbi-tools-x11: want Cn3D++
964082 parsinsert fails it's tests when built with -O3 bullseye, moreinfo, sid, unreproducible
984293 plink: ftbfs with GCC-11 bookworm, sid
970599 src:prime-phylo: no autopkgtest available yet newcomer
986410 autopkg tests don't run with the same dependencies as during the build
892222 seqan2: FTBFS on hppa: app_test_seqan_tcoffee fails on 2trx.mlcs.fasta upstream
917851 seqan2 2.4.0+dfsg-9: FTBFS, alignment problem ftbfs
985071 smalt: native FTBFS with DEB_BUILD_OPTIONS=nocheck
956848 t-coffee: should use "example" blastpgp.pl
984367 tigr-glimmer: ftbfs with GCC-11 bookworm, sid
978928 zalign: ftbfs with autoconf 2.70 bookworm, sid

Open bugs in suggested packages

Done bugs

987023 bamtools: autopkgtest failure: times out on armhf and s390x
985596 emboss has mailcap entries with quoted %-escapes patch, security
986524 freecontact: FTBFS: devlibs error: There is no package matching [libgfortran-8-dev] and noone provides it, please report bug to d-shlibs maintainer bullseye, ftbfs, sid
985157 gromacs-data: broken bash-completion scripts for gmx
749367 htslib FTBFS on testing for mips/mipsel bullseye, buster, moreinfo, patch, sid, stretch
800469 htslib FTBFS on armhf, bus error. bullseye, buster, ftbfs, patch, sid, stretch
849667 htslib: FTBFS on armhf: [test] Bus error bullseye, buster, ftbfs, patch, sid, stretch
962190 primer3: please disable Big Endian tests on autopkgtests too patch
*To estimate the overall status of the packages in the dependencies of a metapackage a weighted severity is calculated. Done bugs are ignored and bugs in dependent and recommended packages are weighted by factor three compared to suggested packages. Release critical bugs have a much larger weight than important, while the contribution of normal bugs is even smaller and minor bugs have a very small weight. Wishlist bugs are ignored in this calculation. The resulting sum is compared to some boundaries to find a verbal form. The actual numbers need some adjustment to make real sense - this evaluation method is in testing phase.
The severities of bugs are weighted as follows:
critical10
grave10
serious10
important5
normal3
minor1
wishlist0
Last update: Fri, 16 Apr 2021 16:07:23 -0000