Summary
Bugs of task
covid-19
Total bugs:
146
Open bugs:
135
Fixed bugs:
11
Links to other tasks
Legend
| Severity | Dependent | Suggested |
|---|
| critical |
0 |
0 |
| grave |
1 |
0 |
| serious |
9 |
1 |
| important |
26 |
2 |
| normal |
64 |
2 |
| minor |
13 |
0 |
| wishlist |
17 |
0 |
|
Summary bugs page of task Covid-19
Immediately looking into bugs of the dependencies of this task is advised (1331)*
Open bugs in dependent packages
1 grave, 9 serious, 26 important, 64 normal, 13 minor, 17 wishlist
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| 920282 |
abyss fails to build on hurd - googletest EXPECT_DEATH |
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| 870060 |
bcftools FTBFS on big endian: 107 tests failed |
ftbfs, upstream |
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| 1010653 |
busco: add autopkgtest to check integration with hmmer and prodigal |
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| 1018936 |
busco: unsatisfiable dependency on arm64 |
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| 935879 |
Update to use CharLS 2.0 |
upstream |
| 988644 |
Defined Term: ISO 2022 IR 87 is not supported |
upstream, confirmed |
| 989108 |
dcmtk-doc: broken symlink: /usr/share/doc/dcmtk-doc/html/jquery.js -> ../../../javascript/jquery/jquery.js |
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| 990134 |
dcmtk: legacy conffiles leftover |
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| 990135 |
dcmtk: leftovers after package purge |
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| 995966 |
epigrass: epirunner and epidash fail to run due to missing dash modules |
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| 998265 |
epigrass: autopkgtest regression: The 'panel' distribution was not found |
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| 731435 |
warning: iteration 55823u invokes undefined behavior [-Waggressive-loop-optimizations] |
upstream, patch |
| 749783 |
gdcm: Conflicting declarations of jpeg_memory_mgr may lead to invalid function calls |
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| 826048 |
Faulty CMake file impairs compiling against GDCM |
wontfix, moreinfo |
| 1013156 |
gdcm: vtk[6,7] removal |
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|
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| 644397 |
Provide runtime detection for CPU SIMD capabilities |
upstream |
| 983942 |
gromacs: ftbfs with -march=x86-64-v3 |
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| 762353 |
libaqbanking-data: Missing sentence to translate |
l10n |
| 1006686 |
libchipcard-dev: undefined variable in libchipcard-client.pc |
patch, upstream, fixed-upstream |
| 1006687 |
libchipcard6: card.c leaks memory |
patch, upstream |
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| 934619 |
libmaus2 FTBFS (mostly 32bit): error: no matching function for call |
ftbfs, upstream, help, fixed-upstream |
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| 996981 |
multiqc: Link to jquery missing |
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| 891197 |
Please switch to pcre2 |
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| 956850 |
ncbi-blast+: Please provide /usr/bin/legacy_blast.pl |
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| 984871 |
ncbi-blast+: Missing headers for shared libraries |
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| 1010110 |
ncbi-blast+: terminate called after throwing an instance of 'ncbi::CIO_Exception' |
wontfix |
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| 1017871 |
shiny-server: server-function don't run |
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| 1001387 |
Wishlist: Package Stone of Orthanc Webviewer |
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| 1011156 |
picard-tools: FTBFS with OpenJDK 17 due to com.sun.javadoc removal |
bookworm, ftbfs, sid |
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| 1009156 |
pplacer: Add autopkgtest |
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| 1018448 |
pynn: build-depends on python3-nose or uses it for autopkgtest |
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| 1018464 |
python-biom-format: build-depends on python3-nose or uses it for autopkgtest |
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| 1009118 |
python3-biopython: incompatible with muscle >= 5 |
wontfix, upstream, confirmed, fixed-upstream |
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| 979625 |
autopkgtest: ModuleNotFoundError (ipytree) and AssertionError |
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| 1018501 |
python-gffutils: build-depends on python3-nose or uses it for autopkgtest |
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| 860158 |
python-pbcore: prints warnings with recent h5py on ppc64el |
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| 1018551 |
python-pbcore: build-depends on python3-nose or uses it for autopkgtest |
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| 1018559 |
python-pyani: build-depends on python3-nose or uses it for autopkgtest |
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| 1018560 |
python-pybedtools: build-depends on python3-nose or uses it for autopkgtest |
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| 998854 |
undefined symbol: _PyUnicode_DecodeUnicodeEscape |
upstream, sid, fixed-upstream, wontfix, bookworm |
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| 983517 |
pytorch: Build documentation |
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| 997931 |
libtorch-dev: Caffe2Targets.cmake is broken |
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| 1018610 |
recan: build-depends on python3-nose or uses it for autopkgtest |
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| 1008252 |
salmon: FTBFS in unstable and testing |
ftbfs |
| 1008254 |
salmon: FTBFS with glibc 2.34 |
ftbfs |
| 1011662 |
salmon ftbfs against onetbb/experimental: tbb api break |
ftbfs |
| 1011742 |
salmon: FTBFS with onetbb/2021.5.0-8 in experimental |
ftbfs |
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| 1020035 |
seqan3: FTBFS: char_traits.h:431:56: error: âvoid* __builtin_memcpy(void*, const void*, long unsigned int)â accessing 9223372036854775810 or more bytes at offsets 4 and 3 may overlap up to 9223372036854775813 bytes at offset -3 [-Werror=restrict] |
bookworm, ftbfs, sid |
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| 1019317 |
snakemake: HTML dashboard (--gui) is broken due to use of local jquery/bootstrap |
patch |
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| 853113 |
spades: Fails to build with unhelpful error message in a "low" memory machine |
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| 976523 |
spades: FTBFS: jemalloc_internal.h:292:6: error: #error "No LG_QUANTUM definition for architecture; specify via CPPFLAGS" |
sid, bookworm, bullseye, ftbfs |
| 1015668 |
spades: ftbfs with LTO (link time optimization) enabled |
bookworm, sid |
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| 170477 |
xmltex: can't make DVI/PS from DocBook orderedlist/itemizedlist |
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| 181444 |
xmltex: can't make DVI/PS from DocBook orderedlist/itemizedlist |
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| 184072 |
xmltex: can't make DVI/PS from DocBook orderedlist/itemizedlist |
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| 184086 |
xmltex: can't make DVI/PS from DocBook orderedlist/itemizedlist |
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| 189616 |
jadetex: Japanese JadeTeX |
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| 234884 |
Cannot generate PDF when callouts are used |
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| 310148 |
xmlto: pdf output fails with LaTeX errors |
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| 345637 |
xmltex: behaves as if --force-confold had been given |
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| 427443 |
provide a documentation index (like tetex had) |
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| 444084 |
tex4ht: you-on gets extra space |
moreinfo |
| 450941 |
texlive-fonts-extra: cannot use mathtime/belleek |
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| 468225 |
pdfjam: pdfnup does not use /etc/papersize |
moreinfo |
| 536380 |
HTML mode is spewing some XML |
wontfix |
| 536393 |
HTML mode is specifing image sizes in points, in violation of HTML standard (and sanity) |
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| 537284 |
Ligature ï¬ becoming ø in avant garde |
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| 554637 |
tex4ht: Leaves intermediate files |
wontfix |
| 554998 |
Glitches when using hyperref and math mode |
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| 554999 |
tex4ht: mk4ht should fail when it encounters errors |
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| 572226 |
tex4ht: Incorrect output for align, eqnarray, inline longrightarrow |
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| 596703 |
texlive-publishers has dependencies on files texlive-bibtex-extra but doesn't even recommend it |
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| 604054 |
if hyperref is loaded before glossaries then text size is adapted wrongly |
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| 615596 |
tex4ht: mk4ht dblatex file.tex fails with xtpipes error |
upstream, patch, pending, fixed-upstream |
| 635834 |
texlive-latex-extra: dependency problem: fancytooltips requires acrotex which is not packaged |
wontfix |
| 659772 |
landscape sciposter + hyperref + latex + dvips = center-mirrored image |
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| 675869 |
make PDF smaller with version1.4 |
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| 683163 |
xmlto fail to convert example docbook to PDF (LaTeX Error, missing \item?) |
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| 744309 |
FTBFS Please rebuilt from source flash file |
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| 764122 |
MnSymbol and new[tp]x shouldn't be in the texlive-fonts-extra ghetto |
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| 767872 |
tex4ht: htlatex fails without non-zero exit status |
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| 772378 |
texlive-latex-extra-doc: bashism in /bin/sh script |
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| 774942 |
texlive-latex-extra: package description has too many blank lines and is too long |
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| 801505 |
texlive-latex-extra: complaint about weong file in dpkg trigger |
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| 807211 |
texlive-latex-extra: bug in cool.sty; dependency on texlive-fonts-extra |
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| 862966 |
texlive-fonts-extra: Missing yinitas.tfm which makes yfonts.sty unusable |
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| 866114 |
texlive-fonts-extra: Icon errors when installed alongside fonts-font-awesome |
moreinfo |
| 877769 |
Q: files (.tex, .cls, Makefile, etc...) compressed to .gz (but seem should not) |
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| 877770 |
Q: Why -doc package depends on tex? |
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| 899413 |
texlive-latex-extra: beamerthemeAachen.sty is missing package tangocolors |
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| 916796 |
IEEEfull.bib: cannot be read in encoding 'utf8' by biber |
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| 917996 |
texlive-pstricks: gs gives undefined in --execute-- when using color.tex with pstricks on plain tex. |
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| 929558 |
texlive-fonts-extra: STIX2 fonts cannot called by their font names by xelatex & fontspec.sty |
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| 930850 |
texlive-latex-extra: Update listings macro separator |
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| 941823 |
tabu: cell background colours broken |
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| 953073 |
texlive-fonts-extra: TwemojiMozilla.ttf is included in 4 Debian packages |
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| 958562 |
texlive-extra-utils: missing man page for pdfcrop |
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| 974724 |
no useful documentation of pdfjam commands |
wontfix |
| 992269 |
texlive-bibtex-extra: Missing beebe bst stiles like abstract.bst |
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| 997024 |
[greek]babel + cleveref + pagenumbering + label = â |
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| 1008808 |
texlive-games: [chess.sty] Incorrect usage of babel breaks package |
wontfix |
| 1011759 |
texlive-extra-utils: Script pdfjoin has vanished |
wontfix |
| 1019236 |
Why does mere inclusion of pstricks change A4 to letter? |
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| 980509 |
umap-learn: Binary package name should be python3-umap-learn |
pending |
| 1018656 |
umap-learn: build-depends on python3-nose or uses it for autopkgtest |
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| 976511 |
vg: FTBFS on arm64: configure: error: Could not find a version of the library! |
bookworm, sid, bullseye, ftbfs |
| 987184 |
vg -- excessive variants built, and not tested |
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| 1013061 |
vg: ftbfs with GCC-12 |
bookworm, sid, ftbfs |
| 1015699 |
vg: ftbfs with LTO (link time optimization) enabled |
bookworm, sid |
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| 348845 |
please provide a male character as well |
upstream |
| 359991 |
Please add 'daemon' mode |
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| 371826 |
new exercises |
upstream |
| 388570 |
option for less disk intensity |
upstream |
| 533294 |
Improve .desktop file: Office category fits better than Accesibility and german comment |
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| 545585 |
workrave: Cant resume after unlocking screen |
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| 598402 |
workrave: Should count suspend time as pauses |
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| 632232 |
workrave: Changing sound options has no effect |
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| 695344 |
Installs gobject-introspection / library files into system wide paths |
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| 783872 |
[workrave] xfce4 panel plugin uses the wrong path in desktop file |
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| 789044 |
workrave: lock was blocked by another application |
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| 804170 |
workrave: Workrave resets system volume levels |
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| 829450 |
workrave: Cannot interract with Workrave icon in KDE system tray |
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| 843563 |
Workrave applet unusable |
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| 853933 |
workrave: segfault when trying to start under wayland |
upstream |
| 911054 |
workrave: desktop instability in multimonitor (3) setup |
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| 921765 |
workrave: occasionally runs into false activity detection |
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| 943477 |
workrave: multiple overlaying popups in multimonitor setup |
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| 967815 |
workrave: depends on deprecated GTK 2 |
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| 980873 |
workrave: Break warning window grabs keyboard focus on Wayland |
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| 988064 |
workrave: applet does not display timer after screen lock |
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Open bugs in suggested packages
1 serious, 2 important, 2 normal
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| 928076 |
bcbio: Workflows not ready for non-developers to depend on. |
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| 1018312 |
bcbio: build-depends on python3-nose or uses it for autopkgtest |
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| 1018577 |
python-seqcluster: build-depends on python3-nose or uses it for autopkgtest |
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| 1002223 |
simde: fails test with clang: error: cd clang_test && LC_ALL=C.UTF-8 MESON_TESTTHREADS=4 meson test returned exit code 6 |
experimental, sid, bookworm, ftbfs, upstream |
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| 1005713 |
tensorflow FTBFS; bazel still tries to download during build. |
|
Done bugs
|
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| 1016331 |
gdcm: FTBFS: make[2]: *** [Makefile:12: refman.pdf] Error 1 |
sid, bookworm, ftbfs |
| 1017027 |
gdcm: ftbfs, sed command in debian/rules fails |
ftbfs, sid |
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| 1018433 |
paleomix: build-depends on python3-nose or uses it for autopkgtest |
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| 1017070 |
python-etelemetry: server offline, DEP8 tests fail |
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| 994423 |
pytorch: Baseline violation on armhf |
bullseye, sid, bookworm, ftbfs |
| 1004782 |
pytorch: FTBFS with ffmpeg 5.0 |
sid, ftbfs, bookworm |
| 1009200 |
pytorch: (autopkgtest) needs update for python3.10: 'float' object cannot be interpreted as an integer |
sid, bookworm |
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| 1015250 |
q2-feature-table: Conflict with biom-format 2.1.12 |
upstream |
| 1017515 |
q2-feature-table: needs update for python-biom-format/2.1.12-1 |
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| 1018608 |
q2-quality-filter: build-depends on python3-nose or uses it for autopkgtest |
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| 955965 |
workrave: Depends on deprecated dbus-glib |
bullseye, sid, bookworm |
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