Summary
Bugs of task
covid-19
Total bugs:
158
Open bugs:
135
Fixed bugs:
23
Links to other tasks
Legend
| Severity | Dependent | Suggested |
|---|
| critical |
0 |
0 |
| grave |
1 |
0 |
| serious |
8 |
2 |
| important |
32 |
2 |
| normal |
63 |
0 |
| minor |
11 |
0 |
| wishlist |
16 |
0 |
|
Summary bugs page of task Covid-19
Immediately looking into bugs of the dependencies of this task is advised (1380)*
Open bugs in dependent packages
1 grave, 8 serious, 32 important, 63 normal, 11 minor, 16 wishlist
|
|
| 920282 |
abyss fails to build on hurd - googletest EXPECT_DEATH |
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|
|
| 870060 |
bcftools FTBFS on big endian: 107 tests failed |
ftbfs, upstream |
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|
| 1010653 |
busco: add autopkgtest to check integration with hmmer and prodigal |
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|
|
| 935879 |
Update to use CharLS 2.0 |
upstream |
| 988644 |
Defined Term: ISO 2022 IR 87 is not supported |
confirmed, upstream |
| 989108 |
dcmtk-doc: broken symlink: /usr/share/doc/dcmtk-doc/html/jquery.js -> ../../../javascript/jquery/jquery.js |
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| 990134 |
dcmtk: legacy conffiles leftover |
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| 990135 |
dcmtk: leftovers after package purge |
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| 1014044 |
dcmtk: Multiple CVEs reported: CVE-2022-2119 CVE-2022-2120 CVE-2022-2121 |
security, upstream |
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|
| 995966 |
epigrass: epirunner and epidash fail to run due to missing dash modules |
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| 998265 |
epigrass: autopkgtest regression: The 'panel' distribution was not found |
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|
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| 731435 |
warning: iteration 55823u invokes undefined behavior [-Waggressive-loop-optimizations] |
patch, upstream |
| 749783 |
gdcm: Conflicting declarations of jpeg_memory_mgr may lead to invalid function calls |
|
| 826048 |
Faulty CMake file impairs compiling against GDCM |
moreinfo, wontfix |
| 1013156 |
gdcm: vtk[6,7] removal |
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|
|
| 644397 |
Provide runtime detection for CPU SIMD capabilities |
upstream |
| 983942 |
gromacs: ftbfs with -march=x86-64-v3 |
|
|
|
| 1012952 |
ivar: ftbfs with GCC-12 |
bookworm, sid |
|
|
| 762353 |
libaqbanking-data: Missing sentence to translate |
l10n |
| 1006686 |
libchipcard-dev: undefined variable in libchipcard-client.pc |
fixed-upstream, patch, upstream |
| 1006687 |
libchipcard6: card.c leaks memory |
patch, upstream |
|
|
| 934619 |
libmaus2 FTBFS (mostly 32bit): error: no matching function for call |
fixed-upstream, ftbfs, help, upstream |
|
|
| 996981 |
multiqc: Link to jquery missing |
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|
|
| 891197 |
Please switch to pcre2 |
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| 956850 |
ncbi-blast+: Please provide /usr/bin/legacy_blast.pl |
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| 984871 |
ncbi-blast+: Missing headers for shared libraries |
|
| 1010110 |
ncbi-blast+: terminate called after throwing an instance of 'ncbi::CIO_Exception' |
wontfix |
|
|
| 1001387 |
Wishlist: Package Stone of Orthanc Webviewer |
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|
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| 1011156 |
picard-tools: FTBFS with OpenJDK 17 due to com.sun.javadoc removal |
bookworm, ftbfs, sid |
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| 1009156 |
pplacer: Add autopkgtest |
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|
|
| 1009118 |
python3-biopython: incompatible with muscle >= 5 |
confirmed, fixed-upstream, upstream, wontfix |
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|
| 979625 |
autopkgtest: ModuleNotFoundError (ipytree) and AssertionError |
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|
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| 860158 |
python-pbcore: prints warnings with recent h5py on ppc64el |
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|
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| 1008452 |
python-streamz: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.10 3.9" returned exit code 13 |
bookworm, ftbfs, sid |
|
|
| 998854 |
undefined symbol: _PyUnicode_DecodeUnicodeEscape |
bookworm, fixed-upstream, sid, upstream, wontfix |
|
|
| 983517 |
pytorch: Build documentation |
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| 997931 |
libtorch-dev: Caffe2Targets.cmake is broken |
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| 1004782 |
pytorch: FTBFS with ffmpeg 5.0 |
bookworm, ftbfs, sid |
| 1009200 |
pytorch: (autopkgtest) needs update for python3.10: 'float' object cannot be interpreted as an integer |
bookworm, sid |
|
|
| 1008252 |
salmon: FTBFS in unstable and testing |
ftbfs |
| 1008254 |
salmon: FTBFS with glibc 2.34 |
ftbfs |
| 1011662 |
salmon ftbfs against onetbb/experimental: tbb api break |
|
| 1011742 |
salmon: FTBFS with onetbb/2021.5.0-8 in experimental |
ftbfs |
|
|
| 853113 |
spades: Fails to build with unhelpful error message in a "low" memory machine |
|
| 976523 |
spades: FTBFS: jemalloc_internal.h:292:6: error: #error "No LG_QUANTUM definition for architecture; specify via CPPFLAGS" |
bookworm, bullseye, ftbfs, sid |
|
|
| 170477 |
xmltex: can't make DVI/PS from DocBook orderedlist/itemizedlist |
|
| 181444 |
xmltex: can't make DVI/PS from DocBook orderedlist/itemizedlist |
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| 184072 |
xmltex: can't make DVI/PS from DocBook orderedlist/itemizedlist |
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| 184086 |
xmltex: can't make DVI/PS from DocBook orderedlist/itemizedlist |
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| 189616 |
jadetex: Japanese JadeTeX |
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| 234884 |
Cannot generate PDF when callouts are used |
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| 310148 |
xmlto: pdf output fails with LaTeX errors |
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| 345637 |
xmltex: behaves as if --force-confold had been given |
|
| 427443 |
provide a documentation index (like tetex had) |
|
| 444084 |
tex4ht: you-on gets extra space |
moreinfo |
| 450941 |
texlive-fonts-extra: cannot use mathtime/belleek |
|
| 468225 |
pdfjam: pdfnup does not use /etc/papersize |
moreinfo |
| 536380 |
HTML mode is spewing some XML |
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| 536393 |
HTML mode is specifing image sizes in points, in violation of HTML standard (and sanity) |
|
| 537284 |
Ligature ï¬ becoming ø in avant garde |
|
| 550381 |
tex4ht: Creates invalid html document |
|
| 554637 |
tex4ht: Leaves intermediate files |
wontfix |
| 554998 |
Glitches when using hyperref and math mode |
|
| 554999 |
tex4ht: mk4ht should fail when it encounters errors |
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| 572226 |
tex4ht: Incorrect output for align, eqnarray, inline longrightarrow |
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| 596703 |
texlive-publishers has dependencies on files texlive-bibtex-extra but doesn't even recommend it |
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| 604054 |
if hyperref is loaded before glossaries then text size is adapted wrongly |
|
| 615596 |
tex4ht: mk4ht dblatex file.tex fails with xtpipes error |
fixed-upstream, patch, pending, upstream |
| 635834 |
texlive-latex-extra: dependency problem: fancytooltips requires acrotex which is not packaged |
wontfix |
| 637127 |
biblatex: Version 1.6-1 breaks "refsection=part" functionality |
|
| 659772 |
landscape sciposter + hyperref + latex + dvips = center-mirrored image |
|
| 670040 |
pdfannotextractor & pax do not work at all |
patch |
| 675869 |
make PDF smaller with version1.4 |
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| 683163 |
xmlto fail to convert example docbook to PDF (LaTeX Error, missing \item?) |
|
| 697728 |
pdfjam: No --no-landscape with --nup possible |
|
| 742276 |
pdfannotextractor & pax do not work at all |
patch |
| 744309 |
FTBFS Please rebuilt from source flash file |
|
| 764122 |
MnSymbol and new[tp]x shouldn't be in the texlive-fonts-extra ghetto |
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| 767872 |
tex4ht: htlatex fails without non-zero exit status |
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| 772378 |
texlive-latex-extra-doc: bashism in /bin/sh script |
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| 774942 |
texlive-latex-extra: package description has too many blank lines and is too long |
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| 792676 |
libpdfbox-java: pdfannotextractor.pl fails to find org.pdfbox.cos.ICOSVisitor class |
patch |
| 801505 |
texlive-latex-extra: complaint about weong file in dpkg trigger |
|
| 807211 |
texlive-latex-extra: bug in cool.sty; dependency on texlive-fonts-extra |
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| 862966 |
texlive-fonts-extra: Missing yinitas.tfm which makes yfonts.sty unusable |
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| 866114 |
texlive-fonts-extra: Icon errors when installed alongside fonts-font-awesome |
moreinfo |
| 877769 |
Q: files (.tex, .cls, Makefile, etc...) compressed to .gz (but seem should not) |
|
| 877770 |
Q: Why -doc package depends on tex? |
|
| 899413 |
texlive-latex-extra: beamerthemeAachen.sty is missing package tangocolors |
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| 916796 |
IEEEfull.bib: cannot be read in encoding 'utf8' by biber |
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| 917996 |
texlive-pstricks: gs gives undefined in --execute-- when using color.tex with pstricks on plain tex. |
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| 929558 |
texlive-fonts-extra: STIX2 fonts cannot called by their font names by xelatex & fontspec.sty |
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| 930850 |
texlive-latex-extra: Update listings macro separator |
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| 941823 |
tabu: cell background colours broken |
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| 953073 |
texlive-fonts-extra: TwemojiMozilla.ttf is included in 4 Debian packages |
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| 958562 |
texlive-extra-utils: missing man page for pdfcrop |
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| 974724 |
no useful documentation of pdfjam commands |
wontfix |
| 992269 |
texlive-bibtex-extra: Missing beebe bst stiles like abstract.bst |
|
| 997024 |
[greek]babel + cleveref + pagenumbering + label = â |
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| 1003255 |
(no subject) |
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| 1008808 |
texlive-games: [chess.sty] Incorrect usage of babel breaks package |
wontfix |
| 1011759 |
texlive-extra-utils: Script pdfjoin has vanished |
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| 1012488 |
texlive-latex-extra: Using animate from latex-extra together with pictex from texlive-pictures gives fatal error |
|
|
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| 1013275 |
toil: FTBFS with Python 3.10 only |
ftbfs |
|
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| 980509 |
umap-learn: Binary package name should be python3-umap-learn |
pending |
| 1002400 |
umap-learn: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.9 --system=custom "--test-args=PYTHONPATH={build_dir} {interpreter} -m pytest" returned exit code 13 |
bookworm, ftbfs, sid |
|
|
| 1013058 |
uncalled: ftbfs with GCC-12 |
bookworm, sid |
|
|
| 976511 |
vg: FTBFS on arm64: configure: error: Could not find a version of the library! |
bookworm, bullseye, ftbfs, sid |
| 987184 |
vg -- excessive variants built, and not tested |
|
| 1013061 |
vg: ftbfs with GCC-12 |
bookworm, sid |
|
|
| 348845 |
please provide a male character as well |
upstream |
| 359991 |
Please add 'daemon' mode |
|
| 371826 |
new exercises |
upstream |
| 388570 |
option for less disk intensity |
upstream |
| 533294 |
Improve .desktop file: Office category fits better than Accesibility and german comment |
|
| 545585 |
workrave: Cant resume after unlocking screen |
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| 598402 |
workrave: Should count suspend time as pauses |
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| 632232 |
workrave: Changing sound options has no effect |
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| 695344 |
Installs gobject-introspection / library files into system wide paths |
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| 783872 |
[workrave] xfce4 panel plugin uses the wrong path in desktop file |
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| 789044 |
workrave: lock was blocked by another application |
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| 804170 |
workrave: Workrave resets system volume levels |
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| 829450 |
workrave: Cannot interract with Workrave icon in KDE system tray |
|
| 843563 |
Workrave applet unusable |
|
| 853933 |
workrave: segfault when trying to start under wayland |
upstream |
| 911054 |
workrave: desktop instability in multimonitor (3) setup |
|
| 921765 |
workrave: occasionally runs into false activity detection |
|
| 943477 |
workrave: multiple overlaying popups in multimonitor setup |
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| 967815 |
workrave: depends on deprecated GTK 2 |
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| 980873 |
workrave: Break warning window grabs keyboard focus on Wayland |
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| 988064 |
workrave: applet does not display timer after screen lock |
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Open bugs in suggested packages
2 serious, 2 important
|
|
| 928076 |
bcbio: Workflows not ready for non-developers to depend on. |
|
|
|
| 1012386 |
python-seqcluster: FTBFS: ModuleNotFoundError: No module named 'attr' |
ftbfs |
|
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| 1002223 |
simde: fails test with clang: error: cd clang_test && LC_ALL=C.UTF-8 MESON_TESTTHREADS=4 meson test returned exit code 6 |
bookworm, experimental, ftbfs, sid, upstream |
|
|
| 1005713 |
tensorflow FTBFS; bazel still tries to download during build. |
|
Done bugs
|
|
| 697073 |
dcmtk: dcmdjpeg fails to decode a lossless JPEG |
confirmed, upstream |
| 718557 |
dcmtk: Missing transition in dcmqrscp |
upstream, wontfix |
| 730610 |
C-STORE SCU not working with JPIP Transfer Syntax |
confirmed, upstream |
| 748403 |
Conflicting declarations of jpeg_memory_mgr may lead to invalid function calls |
confirmed, fixed-upstream, patch, upstream |
| 999887 |
dcmtk FTCBFS: uses TRY_RUN check for signedness of char |
fixed-upstream, upstream |
| 1010536 |
libdcmimage.so.16: cannot open shared object file: No such file or directory |
d-i, ftbfs |
| 1010729 |
dcmtk: Default path to DICOM dictionaries is wrong |
|
| 1010912 |
libdcmtk16 version 3.6.7-1: ldd blender shows missing .so files |
d-i, ftbfs |
| 1012417 |
libdcmtk17: Fails to install; conflict with libdcmtk16: trying to overwrite '/usr/share/libdcmtk16/acrnema.dic', which is also in package libdcmtk16 3.6.6-5 |
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|
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| 1009383 |
gromacs: FTBFS: AttributeError: module 'collections' has no attribute 'Iterable' |
bookworm, experimental, ftbfs, sid |
|
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| 1012946 |
htscodecs: ftbfs with GCC-12 |
bookworm, sid |
|
|
| 1011886 |
orthanc-dicomweb: FTBFS: make[1]: *** [debian/rules:37: override_dh_auto_configure] Error 2 |
bookworm, ftbfs, sid |
|
|
| 1013577 |
picard-tools: FTBFS: PicardHelpDocWorkUnitHandler.java:6: error: cannot find symbol |
bookworm, ftbfs, sid |
|
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| 1013713 |
python-biom-format: FTBFS: pytest7 regression, not sure what the problem is |
bookworm, ftbfs, sid |
|
|
| 1012224 |
python-tornado: autopkgtest regression in testing |
ftbfs |
|
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| 994423 |
pytorch: Baseline violation on armhf |
bookworm, bullseye, ftbfs, sid |
|
|
| 1013030 |
rna-star: ftbfs with GCC-12 |
bookworm, sid |
|
|
| 1008352 |
seqan3: FTBFS: type_traits.hpp:68:37: error: no match for call to â(const ranges::views::zip_fn) (std::ranges::single_view<std::tuple<std::vector<seqan3::dna4, std::allocator<seqan3::dna4> >&, std::vector<seqan3::dna4, std::allocator<seqan3::dna4> >&> >, std::ranges::iota_view<int, std::unreachable_sentinel_t>)â |
bookworm, ftbfs, sid |
|
|
| 1012257 |
libsnpeff-java-doc: Unnecessary dependency on libfreemarker-java-doc |
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|
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| 1011968 |
spades: autopkgtest regression |
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|
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| 987778 |
texlive-latex-extra: fails to declare dependency on libspreadsheet-parseexcel-perl |
|
| 990494 |
texlive-latex-extra: missing dependency on texlive-science for invoice.sty |
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|
|
| 955965 |
workrave: Depends on deprecated dbus-glib |
bookworm, bullseye, sid |
|
