Summary

Image analysis

Debian Science image analysis packages

This metapackage will install Debian Science packages related to scientific image acquisition. This might be used in several sciences (as for instance science-dataacquisition, science-viewing and science-typesetting).

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Description

For a better overview of the project's availability as a Debian package, each head row has a color code according to this scheme:

Official Debian packages with high relevance
Packaging has started and developers might try the packaging code in VCS

If you discover a project which looks like a good candidate for Debian Science to you, or if you have prepared an unofficial Debian package, please do not hesitate to send a description of that project to the Debian Science mailing list

Links to other tasks

Index of all tasks

Brain-computer interface

Biology

Chemistry

Data acquisition

Data acquisition development

Data Management

Devices

Distributed Computing

Economics

Electrophysiology

Engineering

Engineering-dev

Financial engineering

Geography

Geometry

High Energy Physics

High Energy Physics (devel)

Image analysis

Image analysis development

Linguistics

Logic

Machine Learning

Mathematics

Mathematics-dev

Meteorology

Meteorology-dev

Nanoscale Physics

Nanoscale Physics Development

Cognitive Neuroscience

Neuroscience Datasets

Modeling of neural systems

Numerical Computation

Physics

Physics-dev

Presentation

Psychophysics

Robotics

Robotics-dev

Simulations

Social

Statistics

Tools

typesetting

Viewing

Viewing-dev

Workflow

Debian Science Image analysis packages

Official Debian packages with high relevance

gwyddion

??? missing short description for package gwyddion :-(

https://gwyddion.net/

Maintainer: Debian Med Packaging Team (Andreas Tille)

Versions of package gwyddion
Release	Version	Architectures
trixie	2.67-1	amd64,arm64,armel,armhf,i386,ppc64el,riscv64,s390x
bookworm	2.62-1	amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
bullseye	2.57-1	amd64,arm64,armhf,i386
sid	3.10-6	amd64,arm64,loong64,ppc64el,riscv64

Debtags of package gwyddion:
field	physics
interface	x11
role	program
science	visualisation
scope	application
uitoolkit	gtk
use	analysing, viewing
works-with	image, image:raster
x11	application

Popcon: 68 users (105 upd.)^*

Versions and Archs

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License: DFSG free

Official Debian package

Git

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Please cite: David Nečas and Petr Klapetek: Gwyddion: an open-source software for SPM data analysis. (eprint) Central European Journal of Physics 10(1):181-188 (2012)

Registry entries: SciCrunch

libcvd-tools

??? missing short description for package libcvd-tools :-(

http://www.edwardrosten.com/cvd/

Maintainer: Debian Science Maintainers (Roland Mas)

Versions of package libcvd-tools
Release	Version	Architectures
bookworm	0.0~git20221020150751.30e8cfc+ds1-1	amd64,arm64,i386,mipsel,ppc64el,s390x
trixie	0.0~git20221020150751.30e8cfc+ds1-1	amd64,arm64,armel,armhf,i386,ppc64el,riscv64,s390x
sid	0.0~git20221020150751.30e8cfc+ds1-1	amd64,arm64,armhf,i386,ppc64el,riscv64,s390x
upstream	0.0~git20240324163423.09b46d8

Popcon: 20 users (94 upd.)^*

Newer upstream!

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License: DFSG free

Official Debian package

Git

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teem-apps

??? missing short description for package teem-apps :-(

http://teem.sourceforge.net/

Maintainer: Debian Science Maintainers (Dominique Belhachemi)

Versions of package teem-apps
Release	Version	Architectures
sid	1.12.0~20160122-8	amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
forky	1.12.0~20160122-8	amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
trixie	1.12.0~20160122-6	amd64,arm64,armel,armhf,i386,ppc64el,riscv64,s390x
bookworm	1.12.0~20160122-5	amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
bullseye	1.12.0~20160122-4	amd64,arm64,armhf,i386

Popcon: 38 users (102 upd.)^*

Versions and Archs

Edit Debtags

License: DFSG free

Official Debian package

Git

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Packaging has started and developers might try the packaging code in VCS

gpivtools

command line programs for Particle Image Velocimetry

http://gpivtools.sourceforge.net/

Responsible: Gerber van der Graaf (Gerber van der Graaf)

Versions and Archs

License: free

Debian package not available

Git

Version: 0.6.0-2

A collection of programs for images that are generated during a Particle Image Velocimetry (PIV) experiment. This is a technique to obtain the velocity field of a fluid flow quantitatively and is performed by tracking tracer particles that have been seeded to a fluid. The technique is also applied for observing deformations at surfaces of (solid) bodies. The package contains:

an image processing program for typical filtering and manipulation routines that may be convenient for PIV.

an image interrogation program resulting into estimators of particle image displacements.

validation programs to test on outliers, peak-locking effect and velocity gradients.

post-processing programs for data manipulation (flipping, rotation etc), spatial and time scaling, calculation of spatial averages and derivative quantities from the PIV data, like vorticity and strain.

miscellaneous programs and scripts to perform image format conversion, batch-processing, pipeline processing (image evaluation, validation and post-processing at once), calculation of time averages from a series of PIV data sets, data-visualization and data-manipulation.

All programs start with gpiv_.

This package contains all files used by gpivtools and gpivtools-mpi, like the man pages.